RchiOBHm_Chr6g0304551

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Forward (+)
63785059 .. 63785265
207 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 168 bp
ATGCCATATTTAACTGATGCCTTACAAGAGGCTGAGGCCTATATTCCCTACCGGAGTGTCATTTCCCCATATGCCACTGATGACCAAATTCAAAGCGAGCTTTACAAGTTAATGACAATGCAAAACAGTCTTCGTTCTCCACGACACCCCATCTTAGCTCCAGGTTAG

Protein Analysis

55

Amino Acids

6.29

Weight (kDa)

4.95

Isoelectric Point (pI)

80.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 87
AgsI TTSAA 1 cut(s) 92
AjnI CCWGG 1 cut(s) 160
AluBI AGCT 2 cut(s) 100, 158
AluI AGCT 2 cut(s) 100, 158
AoxI GGCC 1 cut(s) 36
ApoI RAATTY 1 cut(s) 87
BbsI GAAGAC 1 cut(s) 122
BbvCI CCTCAGC 1 cut(s) 33
BccI CCATC 1 cut(s) 158
BciT130I CCWGG 1 cut(s) 162
Bme1390I CCNGG 1 cut(s) 162
BmrFI CCNGG 1 cut(s) 162
BmsI GCATC 1 cut(s) 7
BpiI GAAGAC 1 cut(s) 122
BpmI CTGGAG 1 cut(s) 144
Bpu10I CCTNAGC 1 cut(s) 33
BsaWI WCCGGW 1 cut(s) 51
BseBI CCWGG 1 cut(s) 162
BseMII CTCAG 1 cut(s) 24
BshFI GGCC 1 cut(s) 38
BsiSI CCGG 1 cut(s) 52
BsnI GGCC 1 cut(s) 38
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 1 cut(s) 25
Bst2UI CCWGG 1 cut(s) 162
Bst4CI ACNGT 1 cut(s) 128
BstC8I GCNNGC 1 cut(s) 98
BstDEI CTNAG 2 cut(s) 33, 154
BstNI CCWGG 1 cut(s) 162
BstSCI CCNGG 1 cut(s) 160
BstV2I GAAGAC 1 cut(s) 122
BsuRI GGCC 1 cut(s) 38
BtsIMutI CAGTG 1 cut(s) 75
Cac8I GCNNGC 1 cut(s) 98
CviJI RGCY 4 cut(s) 32, 38, 100, 158
CviKI_1 RGCY 4 cut(s) 32, 38, 100, 158
DdeI CTNAG 2 cut(s) 33, 154
Eco147I AGGCCT 1 cut(s) 38
EcoRII CCWGG 1 cut(s) 160
FaiI YATR 4 cut(s) 7, 42, 70, 72
FauNDI CATATG 1 cut(s) 70
GsuI CTGGAG 1 cut(s) 144
HaeIII GGCC 1 cut(s) 38
HapII CCGG 1 cut(s) 52
HpaII CCGG 1 cut(s) 52
HpyCH4III ACNGT 1 cut(s) 128
HpyCH4V TGCA 1 cut(s) 121
HpyF3I CTNAG 2 cut(s) 33, 154
LmnI GCTCC 1 cut(s) 163
LpnPI CCDG 2 cut(s) 65, 147
LweI GCATC 1 cut(s) 7
MboII GAAGA 1 cut(s) 122
MluCI AATT 1 cut(s) 87
MnlI CCTC 2 cut(s) 22, 28
MseI TTAA 2 cut(s) 11, 110
MspI CCGG 1 cut(s) 52
MspR9I CCNGG 1 cut(s) 162
MvaI CCWGG 1 cut(s) 162
NdeI CATATG 1 cut(s) 70
PceI AGGCCT 1 cut(s) 38
PcsI WCGNNNNNNNCGW 1 cut(s) 139
Psp6I CCWGG 1 cut(s) 160
PspGI CCWGG 1 cut(s) 160
SaqAI TTAA 2 cut(s) 11, 110
ScrFI CCNGG 1 cut(s) 162
SetI ASST 3 cut(s) 102, 160, 166
SfaNI GCATC 1 cut(s) 7
SgeI CNNG 5 cut(s) 38, 64, 109, 118, 153
Sse9I AATT 1 cut(s) 87
SseBI AGGCCT 1 cut(s) 38
StuI AGGCCT 1 cut(s) 38
StyD4I CCNGG 1 cut(s) 160
TaaI ACNGT 1 cut(s) 128
TasI AATT 1 cut(s) 87
Tru1I TTAA 2 cut(s) 11, 110
Tru9I TTAA 2 cut(s) 11, 110
TscAI CASTG 1 cut(s) 82
TspRI CASTG 1 cut(s) 82
XapI RAATTY 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.