RchiOBHm_Chr5g0030341

Gamma-glutamyl

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
N/A
Physical Location & Seq
Forward (+)
24027856 .. 24029084
1229 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 348 bp
ATGCAACAGTATGGTATCTCACCAGAGACGTTGGAAGAGAGCCAAGATCTATCAAGTTTTTTTAAGATCTTGACAACCAGTACTGATAAAAATGATAAGGTCTATGTCTCCACAGTACATGCATACCACTATCCTGTGACTGCCTTCCAATGGCATCCGGAGAAAACTGCTTTTGAATGGGGGTTACCGATGATTCCACACTCAGAAGATGCCATTCACGTGACTCAGCACATCGCAAACTTTTTGATCAGCGAGGCAAGGAAGTCATTAAACAGGCCACCTATTCAGGATGTCCTCGACAATCTCATCTACAATTACAGTCCAACATTTTGTGGGAAGGCAGGGTAA

Protein Analysis

115

Amino Acids

13.14

Weight (kDa)

5.56

Isoelectric Point (pI)

45.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 157
AcvI CACGTG 1 cut(s) 220
AfaI GTAC 2 cut(s) 82, 117
AfiI CCNNNNNNNGG 1 cut(s) 150
AgsI TTSAA 1 cut(s) 176
Alw26I GTCTC 2 cut(s) 20, 112
Aor13HI TCCGGA 1 cut(s) 157
AoxI GGCC 1 cut(s) 275
AsuHPI GGTGA 1 cut(s) 12
BbrPI CACGTG 1 cut(s) 220
BclI TGATCA 1 cut(s) 246
BcoDI GTCTC 2 cut(s) 20, 112
BglII AGATCT 2 cut(s) 46, 66
BmcAI AGTACT 1 cut(s) 82
BmsI GCATC 2 cut(s) 163, 199
BsaAI YACGTR 1 cut(s) 220
BsaWI WCCGGW 1 cut(s) 157
Bsc4I CCNNNNNNNGG 1 cut(s) 150
Bse1I ACTGG 1 cut(s) 78
BseAI TCCGGA 1 cut(s) 157
BseGI GGATG 2 cut(s) 154, 295
BseLI CCNNNNNNNGG 1 cut(s) 150
BseMII CTCAG 2 cut(s) 216, 239
BseNI ACTGG 1 cut(s) 78
BshFI GGCC 1 cut(s) 277
BsiSI CCGG 1 cut(s) 158
BslI CCNNNNNNNGG 1 cut(s) 150
BsmAI GTCTC 2 cut(s) 20, 112
BsmBI CGTCTC 1 cut(s) 20
BsnI GGCC 1 cut(s) 277
Bsp13I TCCGGA 1 cut(s) 157
Bsp143I GATC 3 cut(s) 46, 66, 246
BspANI GGCC 1 cut(s) 277
BspCNI CTCAG 2 cut(s) 215, 238
BspEI TCCGGA 1 cut(s) 157
BsrI ACTGG 1 cut(s) 78
BssMI GATC 3 cut(s) 46, 66, 246
Bst4CI ACNGT 3 cut(s) 9, 115, 320
Bst6I CTCTTC 1 cut(s) 30
BstBAI YACGTR 1 cut(s) 220
BstDEI CTNAG 2 cut(s) 202, 225
BstEII GGTNACC 1 cut(s) 183
BstF5I GGATG 2 cut(s) 154, 295
BstKTI GATC 3 cut(s) 49, 69, 249
BstMAI GTCTC 2 cut(s) 20, 112
BstMBI GATC 3 cut(s) 46, 66, 246
BstNSI RCATGY 1 cut(s) 122
BstPI GGTNACC 1 cut(s) 183
BstX2I RGATCY 2 cut(s) 46, 66
BstYI RGATCY 2 cut(s) 46, 66
BsuRI GGCC 1 cut(s) 277
BtgZI GCGATG 1 cut(s) 217
BtsCI GGATG 2 cut(s) 154, 295
Csp6I GTAC 2 cut(s) 81, 116
CviAII CATG 1 cut(s) 119
CviJI RGCY 2 cut(s) 42, 277
CviKI_1 RGCY 2 cut(s) 42, 277
CviQI GTAC 2 cut(s) 81, 116
DdeI CTNAG 2 cut(s) 202, 225
DpnI GATC 3 cut(s) 48, 68, 248
DpnII GATC 3 cut(s) 46, 66, 246
Eam1104I CTCTTC 1 cut(s) 30
EarI CTCTTC 1 cut(s) 30
Eco72I CACGTG 1 cut(s) 220
Eco91I GGTNACC 1 cut(s) 183
EcoO65I GGTNACC 1 cut(s) 183
EcoT22I ATGCAT 1 cut(s) 124
Esp3I CGTCTC 1 cut(s) 20
FaeI CATG 1 cut(s) 122
FaiI YATR 4 cut(s) 12, 105, 120, 124
FatI CATG 1 cut(s) 118
FbaI TGATCA 1 cut(s) 246
FokI GGATG 2 cut(s) 141, 302
HaeIII GGCC 1 cut(s) 277
HapII CCGG 1 cut(s) 158
Hin1II CATG 1 cut(s) 122
HinfI GANTC 2 cut(s) 193, 223
HpaII CCGG 1 cut(s) 158
HphI GGTGA 1 cut(s) 12
Hpy188I TCNGA 1 cut(s) 205
Hpy188III TCNNGA 3 cut(s) 70, 158, 287
HpyAV CCTTC 2 cut(s) 154, 331
HpyCH4III ACNGT 3 cut(s) 9, 115, 320
HpyCH4IV ACGT 2 cut(s) 29, 219
HpyCH4V TGCA 2 cut(s) 4, 122
HpyF3I CTNAG 2 cut(s) 202, 225
HpySE526I ACGT 2 cut(s) 29, 219
Hsp92II CATG 1 cut(s) 122
Kpn2I TCCGGA 1 cut(s) 157
Ksp22I TGATCA 1 cut(s) 246
Kzo9I GATC 3 cut(s) 46, 66, 246
LpnPI CCDG 7 cut(s) 36, 91, 147, 171, 259, 272, 327
LweI GCATC 2 cut(s) 163, 199
MaeII ACGT 2 cut(s) 29, 219
MaeIII GTNAC 3 cut(s) 136, 183, 220
MalI GATC 3 cut(s) 48, 68, 248
MboI GATC 3 cut(s) 46, 66, 246
MboII GAAGA 2 cut(s) 47, 218
MflI RGATCY 2 cut(s) 46, 66
MluCI AATT 1 cut(s) 313
MlyI GAGTC 1 cut(s) 217
MmeI TCCRAC 2 cut(s) 12, 347
MnlI CCTC 2 cut(s) 247, 305
Mph1103I ATGCAT 1 cut(s) 124
MroI TCCGGA 1 cut(s) 157
MseI TTAA 2 cut(s) 63, 269
MslI CAYNNNNRTG 1 cut(s) 218
MspI CCGG 1 cut(s) 158
NdeII GATC 3 cut(s) 46, 66, 246
NlaIII CATG 1 cut(s) 122
NmuCI GTSAC 2 cut(s) 136, 220
NsiI ATGCAT 1 cut(s) 124
NspI RCATGY 1 cut(s) 122
PfeI GAWTC 1 cut(s) 193
PleI GAGTC 1 cut(s) 217
PmaCI CACGTG 1 cut(s) 220
PmlI CACGTG 1 cut(s) 220
PpsI GAGTC 1 cut(s) 217
Ppu21I YACGTR 1 cut(s) 220
PspCI CACGTG 1 cut(s) 220
PspEI GGTNACC 1 cut(s) 183
PsuI RGATCY 2 cut(s) 46, 66
RsaI GTAC 2 cut(s) 82, 117
RsaNI GTAC 2 cut(s) 81, 116
RseI CAYNNNNRTG 1 cut(s) 218
SaqAI TTAA 2 cut(s) 63, 269
Sau3AI GATC 3 cut(s) 46, 66, 246
ScaI AGTACT 1 cut(s) 82
SchI GAGTC 1 cut(s) 217
SetI ASST 4 cut(s) 32, 102, 222, 283
SfaNI GCATC 2 cut(s) 163, 199
SmiMI CAYNNNNRTG 1 cut(s) 218
Sse9I AATT 1 cut(s) 313
TaaI ACNGT 3 cut(s) 9, 115, 320
TaiI ACGT 2 cut(s) 32, 222
TaqI TCGA 1 cut(s) 297
TasI AATT 1 cut(s) 313
TatI WGTACW 2 cut(s) 80, 115
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 2 cut(s) 63, 269
Tru9I TTAA 2 cut(s) 63, 269
TseFI GTSAC 2 cut(s) 136, 220
Tsp45I GTSAC 2 cut(s) 136, 220
XceI RCATGY 1 cut(s) 122
ZrmI AGTACT 1 cut(s) 82
Zsp2I ATGCAT 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.