RchiOBHm_Chr5g0052861

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
N/A
Physical Location & Seq
Reverse (-)
54984303 .. 54984548
246 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 144 bp
ATGACTGGAAATGTTCTTCTTAATGGGAAGAAGACGAGACATGACTATGGTGTTGCTGCTTATGTGACCCAAGAAAATGTGCTGTTGGGAACCCTAACAGTACGAGAAACCATGACACACGGCTCATCTAAGGCTCCCAACTAG

Protein Analysis

47

Amino Acids

5.07

Weight (kDa)

9.4

Isoelectric Point (pI)

7.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 102
Alw26I GTCTC 1 cut(s) 31
ApeKI GCWGC 1 cut(s) 56
BbsI GAAGAC 1 cut(s) 38
BbvI GCAGC 1 cut(s) 43
BceAI ACGGC 1 cut(s) 136
BcoDI GTCTC 1 cut(s) 31
BfaI CTAG 1 cut(s) 142
BisI GCNGC 1 cut(s) 57
BlsI GCNGC 1 cut(s) 58
BmiI GGNNCC 2 cut(s) 91, 135
BpiI GAAGAC 1 cut(s) 38
Bse1I ACTGG 1 cut(s) 10
BseNI ACTGG 1 cut(s) 10
BseXI GCAGC 1 cut(s) 43
BsmAI GTCTC 1 cut(s) 31
BspLI GGNNCC 2 cut(s) 91, 135
BsrI ACTGG 1 cut(s) 10
Bst4CI ACNGT 1 cut(s) 100
BstDEI CTNAG 1 cut(s) 129
BstMAI GTCTC 1 cut(s) 31
BstV1I GCAGC 1 cut(s) 43
BstV2I GAAGAC 1 cut(s) 38
Csp6I GTAC 1 cut(s) 101
CviAII CATG 2 cut(s) 41, 112
CviJI RGCY 2 cut(s) 123, 134
CviKI_1 RGCY 2 cut(s) 123, 134
CviQI GTAC 1 cut(s) 101
DdeI CTNAG 1 cut(s) 129
FaeI CATG 2 cut(s) 44, 115
FaiI YATR 4 cut(s) 42, 48, 63, 113
FatI CATG 2 cut(s) 40, 111
Fnu4HI GCNGC 1 cut(s) 57
Fsp4HI GCNGC 1 cut(s) 57
FspBI CTAG 1 cut(s) 142
GluI GCNGC 1 cut(s) 57
Hin1II CATG 2 cut(s) 44, 115
HpyCH4III ACNGT 1 cut(s) 100
HpyF3I CTNAG 1 cut(s) 129
Hsp92II CATG 2 cut(s) 44, 115
LmnI GCTCC 1 cut(s) 139
Lsp1109I GCAGC 1 cut(s) 43
MaeI CTAG 1 cut(s) 142
MaeIII GTNAC 1 cut(s) 64
MboII GAAGA 3 cut(s) 8, 40, 43
MseI TTAA 1 cut(s) 21
MslI CAYNNNNRTG 1 cut(s) 45
NlaIII CATG 2 cut(s) 44, 115
NlaIV GGNNCC 2 cut(s) 91, 135
NmuCI GTSAC 1 cut(s) 64
PkrI GCNGC 1 cut(s) 58
PspN4I GGNNCC 2 cut(s) 91, 135
RsaI GTAC 1 cut(s) 102
RsaNI GTAC 1 cut(s) 101
RseI CAYNNNNRTG 1 cut(s) 45
SaqAI TTAA 1 cut(s) 21
SatI GCNGC 1 cut(s) 57
SgeI CNNG 7 cut(s) 18, 48, 53, 83, 116, 124, 131
SmiMI CAYNNNNRTG 1 cut(s) 45
SspMI CTAG 1 cut(s) 142
TaaI ACNGT 1 cut(s) 100
Tru1I TTAA 1 cut(s) 21
Tru9I TTAA 1 cut(s) 21
TseFI GTSAC 1 cut(s) 64
TseI GCWGC 1 cut(s) 56
Tsp45I GTSAC 1 cut(s) 64
XspI CTAG 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.