RchiOBHm_Chr5g0054341

WLM domain

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
N/A
Physical Location & Seq
Forward (+)
56914363 .. 56914882
520 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 165 bp
ATGCATGAATGTGAGGAGCTGATGGGTAAGGGTGTAACTGTCACATCAAAGGGGTTTGATCTTCTAGGGAGACGTTTGAGAAGTGTTACACGTCAACCCCCTCTTTCTTCTCTCACAAAACTGCACTTTCTGCTGCAAAAAAGAGAGCGGTTTTGGGATCTTTGA

Protein Analysis

54

Amino Acids

6.34

Weight (kDa)

10.01

Isoelectric Point (pI)

72.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 148
AciI CCGC 1 cut(s) 148
AflIII ACRYGT 1 cut(s) 89
AjiI CACGTC 1 cut(s) 92
AluBI AGCT 1 cut(s) 19
AluI AGCT 1 cut(s) 19
Alw26I GTCTC 1 cut(s) 64
ApeKI GCWGC 1 cut(s) 133
BbvI GCAGC 1 cut(s) 120
BccI CCATC 1 cut(s) 16
BcoDI GTCTC 1 cut(s) 64
BfaI CTAG 1 cut(s) 65
BisI GCNGC 1 cut(s) 134
BlsI GCNGC 1 cut(s) 135
BmgBI CACGTC 1 cut(s) 92
BseRI GAGGAG 1 cut(s) 29
BseXI GCAGC 1 cut(s) 120
BsgI GTGCAG 1 cut(s) 107
BsmAI GTCTC 1 cut(s) 64
BsmBI CGTCTC 1 cut(s) 64
Bsp143I GATC 2 cut(s) 58, 157
BspACI CCGC 1 cut(s) 148
BsrBI CCGCTC 1 cut(s) 148
BssMI GATC 2 cut(s) 58, 157
Bst4CI ACNGT 1 cut(s) 40
BstAPI GCANNNNNTGC 1 cut(s) 130
BstKTI GATC 2 cut(s) 61, 160
BstMAI GTCTC 1 cut(s) 64
BstMBI GATC 2 cut(s) 58, 157
BstMWI GCNNNNNNNGC 1 cut(s) 130
BstV1I GCAGC 1 cut(s) 120
BstX2I RGATCY 1 cut(s) 157
BstYI RGATCY 1 cut(s) 157
BtrI CACGTC 1 cut(s) 92
CviAII CATG 1 cut(s) 5
CviJI RGCY 1 cut(s) 19
CviKI_1 RGCY 1 cut(s) 19
DpnI GATC 2 cut(s) 60, 159
DpnII GATC 2 cut(s) 58, 157
EcoT22I ATGCAT 1 cut(s) 6
Esp3I CGTCTC 1 cut(s) 64
FaeI CATG 1 cut(s) 8
FaiI YATR 1 cut(s) 6
FatI CATG 1 cut(s) 4
Fnu4HI GCNGC 1 cut(s) 134
Fsp4HI GCNGC 1 cut(s) 134
FspBI CTAG 1 cut(s) 65
GluI GCNGC 1 cut(s) 134
Hin1II CATG 1 cut(s) 8
HincII GTYRAC 1 cut(s) 95
HindII GTYRAC 1 cut(s) 95
Hpy166II GTNNAC 1 cut(s) 95
Hpy8I GTNNAC 1 cut(s) 95
HpyCH4III ACNGT 1 cut(s) 40
HpyCH4IV ACGT 2 cut(s) 73, 91
HpyCH4V TGCA 3 cut(s) 4, 124, 136
HpyF10VI GCNNNNNNNGC 1 cut(s) 130
HpySE526I ACGT 2 cut(s) 73, 91
Hsp92II CATG 1 cut(s) 8
Kzo9I GATC 2 cut(s) 58, 157
LmnI GCTCC 1 cut(s) 16
Lsp1109I GCAGC 1 cut(s) 120
MaeI CTAG 1 cut(s) 65
MaeII ACGT 2 cut(s) 73, 91
MaeIII GTNAC 3 cut(s) 34, 40, 85
MalI GATC 2 cut(s) 60, 159
MbiI CCGCTC 1 cut(s) 148
MboI GATC 2 cut(s) 58, 157
MboII GAAGA 2 cut(s) 53, 99
MflI RGATCY 1 cut(s) 157
MnlI CCTC 2 cut(s) 7, 111
Mph1103I ATGCAT 1 cut(s) 6
MslI CAYNNNNRTG 1 cut(s) 9
MwoI GCNNNNNNNGC 1 cut(s) 130
NdeII GATC 2 cut(s) 58, 157
NlaIII CATG 1 cut(s) 8
NmuCI GTSAC 1 cut(s) 40
NsiI ATGCAT 1 cut(s) 6
PkrI GCNGC 1 cut(s) 135
PsuI RGATCY 1 cut(s) 157
RseI CAYNNNNRTG 1 cut(s) 9
SatI GCNGC 1 cut(s) 134
Sau3AI GATC 2 cut(s) 58, 157
SetI ASST 3 cut(s) 21, 76, 94
SgeI CNNG 3 cut(s) 17, 77, 102
SmiMI CAYNNNNRTG 1 cut(s) 9
SsiI CCGC 1 cut(s) 148
SspMI CTAG 1 cut(s) 65
TaaI ACNGT 1 cut(s) 40
TaiI ACGT 2 cut(s) 76, 94
TseFI GTSAC 1 cut(s) 40
TseI GCWGC 1 cut(s) 133
Tsp45I GTSAC 1 cut(s) 40
TspDTI ATGAA 1 cut(s) 21
XspI CTAG 1 cut(s) 65
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.