Lignin degradation and detoxification of lignin-derived products
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Cu-oxidase_2 | PF07731 | 1 - 50 | 3.8e-12 | Multicopper oxidase |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 137, 150 |
| AcsI | RAATTY | 1 cut(s) | 124 |
| AfaI | GTAC | 2 cut(s) | 14, 78 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 139 |
| AgsI | TTSAA | 2 cut(s) | 10, 130 |
| AluBI | AGCT | 2 cut(s) | 31, 96 |
| AluI | AGCT | 2 cut(s) | 31, 96 |
| AlwI | GGATC | 2 cut(s) | 137, 150 |
| ApoI | RAATTY | 1 cut(s) | 124 |
| AspS9I | GGNCC | 1 cut(s) | 45 |
| AsuC2I | CCSGG | 1 cut(s) | 115 |
| AvaII | GGWCC | 1 cut(s) | 45 |
| BamHI | GGATCC | 1 cut(s) | 142 |
| BccI | CCATC | 1 cut(s) | 78 |
| BcnI | CCSGG | 1 cut(s) | 115 |
| Bme1390I | CCNGG | 1 cut(s) | 115 |
| Bme18I | GGWCC | 1 cut(s) | 45 |
| BmgT120I | GGNCC | 1 cut(s) | 45 |
| BmiI | GGNNCC | 3 cut(s) | 46, 112, 144 |
| BmrFI | CCNGG | 1 cut(s) | 115 |
| BpuMI | CCSGG | 1 cut(s) | 115 |
| BsaBI | GATNNNNATC | 1 cut(s) | 69 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 139 |
| Bse8I | GATNNNNATC | 1 cut(s) | 69 |
| BseGI | GGATG | 1 cut(s) | 70 |
| BseJI | GATNNNNATC | 1 cut(s) | 69 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BsiSI | CCGG | 1 cut(s) | 114 |
| BslFI | GGGAC | 1 cut(s) | 58 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BsmFI | GGGAC | 1 cut(s) | 58 |
| Bsp1407I | TGTACA | 1 cut(s) | 76 |
| Bsp143I | GATC | 1 cut(s) | 142 |
| BspLI | GGNNCC | 3 cut(s) | 46, 112, 144 |
| BspPI | GGATC | 2 cut(s) | 137, 150 |
| BsrGI | TGTACA | 1 cut(s) | 76 |
| BssMI | GATC | 1 cut(s) | 142 |
| BstAUI | TGTACA | 1 cut(s) | 76 |
| BstF5I | GGATG | 1 cut(s) | 70 |
| BstKTI | GATC | 1 cut(s) | 145 |
| BstMBI | GATC | 1 cut(s) | 142 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 37 |
| BstSCI | CCNGG | 1 cut(s) | 113 |
| BstX2I | RGATCY | 1 cut(s) | 142 |
| BstYI | RGATCY | 1 cut(s) | 142 |
| BtsCI | GGATG | 1 cut(s) | 70 |
| Cfr13I | GGNCC | 1 cut(s) | 45 |
| Csp6I | GTAC | 2 cut(s) | 13, 77 |
| CviAII | CATG | 1 cut(s) | 86 |
| CviJI | RGCY | 3 cut(s) | 31, 96, 111 |
| CviKI_1 | RGCY | 3 cut(s) | 31, 96, 111 |
| CviQI | GTAC | 2 cut(s) | 13, 77 |
| DpnI | GATC | 1 cut(s) | 144 |
| DpnII | GATC | 1 cut(s) | 142 |
| Eco47I | GGWCC | 1 cut(s) | 45 |
| FaeI | CATG | 1 cut(s) | 89 |
| FaiI | YATR | 3 cut(s) | 87, 93, 102 |
| FaqI | GGGAC | 1 cut(s) | 58 |
| FatI | CATG | 1 cut(s) | 85 |
| FokI | GGATG | 1 cut(s) | 57 |
| HapII | CCGG | 1 cut(s) | 114 |
| Hin1II | CATG | 1 cut(s) | 89 |
| HpaII | CCGG | 1 cut(s) | 114 |
| HpyCH4V | TGCA | 2 cut(s) | 20, 40 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 37 |
| Hsp92II | CATG | 1 cut(s) | 89 |
| Kzo9I | GATC | 1 cut(s) | 142 |
| LmnI | GCTCC | 1 cut(s) | 116 |
| LpnPI | CCDG | 4 cut(s) | 17, 87, 125, 127 |
| MalI | GATC | 1 cut(s) | 144 |
| MboI | GATC | 1 cut(s) | 142 |
| MflI | RGATCY | 1 cut(s) | 142 |
| MluCI | AATT | 1 cut(s) | 124 |
| MslI | CAYNNNNRTG | 1 cut(s) | 84 |
| MspI | CCGG | 1 cut(s) | 114 |
| MspR9I | CCNGG | 1 cut(s) | 115 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 37 |
| NciI | CCSGG | 1 cut(s) | 115 |
| NdeII | GATC | 1 cut(s) | 142 |
| NlaIII | CATG | 1 cut(s) | 89 |
| NlaIV | GGNNCC | 3 cut(s) | 46, 112, 144 |
| PspN4I | GGNNCC | 3 cut(s) | 46, 112, 144 |
| PspPI | GGNCC | 1 cut(s) | 45 |
| PsuI | RGATCY | 1 cut(s) | 142 |
| RsaI | GTAC | 2 cut(s) | 14, 78 |
| RsaNI | GTAC | 2 cut(s) | 13, 77 |
| RseI | CAYNNNNRTG | 1 cut(s) | 84 |
| Sau3AI | GATC | 1 cut(s) | 142 |
| Sau96I | GGNCC | 1 cut(s) | 45 |
| ScrFI | CCNGG | 1 cut(s) | 115 |
| SetI | ASST | 2 cut(s) | 33, 98 |
| SgeI | CNNG | 9 cut(s) | 33, 44, 53, 72, 86, 98, 126, 127, 152 |
| SinI | GGWCC | 1 cut(s) | 45 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 84 |
| Sse9I | AATT | 1 cut(s) | 124 |
| StyD4I | CCNGG | 1 cut(s) | 113 |
| TasI | AATT | 1 cut(s) | 124 |
| TatI | WGTACW | 2 cut(s) | 12, 76 |
| VpaK11BI | GGWCC | 1 cut(s) | 45 |
| XapI | RAATTY | 1 cut(s) | 124 |