RchiOBHm_Chr5g0055731

Glutamyl endopeptidase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
N/A
Physical Location & Seq
Forward (+)
59051971 .. 59052389
419 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 345 bp
ATGTCAGTCCCTGCATCCCGTTTGATAGGTCATCGGAAGATATATGTGTACTCCGATCCTGGCTCCCCCTTGCTCCGGACAACTCCTGCTGGCACATATGTGCTCGCAAAAGTGAAGAAAGAAAATGATGAAGGCACTTATTTACTGCTGAATGGAAATGGTGCTACATCAGAGGGGAATATCCCATTCCTCGATTTGTTTGACATAAATACAGGAAATAAAGAACGAATGTGGAAGAGTGACAAAGAAAAGTATTATGAGGGTGTTGTTGCTTTAATGTCTGATGAGAAAGAAGGAGATCTTCCCATCAATACCTTGAAAATATTGACTTCCAGGAAAAACTGA
Functional Annotation

Protein Analysis

114

Amino Acids

12.71

Weight (kDa)

7.89

Isoelectric Point (pI)

31.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 75
AclWI GGATC 1 cut(s) 50
AfaI GTAC 1 cut(s) 50
AfiI CCNNNNNNNGG 1 cut(s) 75
AgsI TTSAA 1 cut(s) 319
AjnI CCWGG 2 cut(s) 58, 332
AleI CACNNNNGTG 1 cut(s) 98
Alw21I GWGCWC 1 cut(s) 105
AlwI GGATC 1 cut(s) 50
AlwNI CAGNNNCTG 1 cut(s) 11
Aor13HI TCCGGA 1 cut(s) 75
Bbv12I GWGCWC 1 cut(s) 105
BccI CCATC 1 cut(s) 314
BciT130I CCWGG 2 cut(s) 60, 334
BglII AGATCT 1 cut(s) 298
Bme1390I CCNGG 2 cut(s) 60, 334
BmiI GGNNCC 1 cut(s) 64
BmrFI CCNGG 2 cut(s) 60, 334
BmsI GCATC 1 cut(s) 23
BsaWI WCCGGW 1 cut(s) 75
Bsc4I CCNNNNNNNGG 1 cut(s) 75
BseAI TCCGGA 1 cut(s) 75
BseBI CCWGG 2 cut(s) 60, 334
BseGI GGATG 1 cut(s) 14
BseLI CCNNNNNNNGG 1 cut(s) 75
BsiHKAI GWGCWC 1 cut(s) 105
BsiSI CCGG 1 cut(s) 76
BslI CCNNNNNNNGG 1 cut(s) 75
Bsp1286I GDGCHC 1 cut(s) 105
Bsp13I TCCGGA 1 cut(s) 75
Bsp143I GATC 2 cut(s) 55, 298
BspEI TCCGGA 1 cut(s) 75
BspLI GGNNCC 1 cut(s) 64
BspPI GGATC 1 cut(s) 50
BssMI GATC 2 cut(s) 55, 298
Bst2UI CCWGG 2 cut(s) 60, 334
Bst6I CTCTTC 1 cut(s) 230
BstC8I GCNNGC 2 cut(s) 91, 105
BstF5I GGATG 1 cut(s) 14
BstKTI GATC 2 cut(s) 58, 301
BstMBI GATC 2 cut(s) 55, 298
BstNI CCWGG 2 cut(s) 60, 334
BstSCI CCNGG 2 cut(s) 58, 332
BstX2I RGATCY 1 cut(s) 298
BstYI RGATCY 1 cut(s) 298
BtsCI GGATG 1 cut(s) 14
Cac8I GCNNGC 2 cut(s) 91, 105
CaiI CAGNNNCTG 1 cut(s) 11
Csp6I GTAC 1 cut(s) 49
CviJI RGCY 1 cut(s) 63
CviKI_1 RGCY 1 cut(s) 63
CviQI GTAC 1 cut(s) 49
DpnI GATC 2 cut(s) 57, 300
DpnII GATC 2 cut(s) 55, 298
Eam1104I CTCTTC 1 cut(s) 230
EarI CTCTTC 1 cut(s) 230
EcoRII CCWGG 2 cut(s) 58, 332
FaiI YATR 6 cut(s) 43, 45, 97, 99, 206, 258
FalI AAGNNNNNCTT 2 cut(s) 285, 317
FauNDI CATATG 1 cut(s) 97
HapII CCGG 1 cut(s) 76
HpaII CCGG 1 cut(s) 76
Hpy166II GTNNAC 1 cut(s) 49
Hpy188I TCNGA 4 cut(s) 36, 55, 172, 283
Hpy188III TCNNGA 1 cut(s) 76
Hpy8I GTNNAC 1 cut(s) 49
HpyAV CCTTC 2 cut(s) 125, 287
HpyCH4V TGCA 1 cut(s) 14
Kpn2I TCCGGA 1 cut(s) 75
Kzo9I GATC 2 cut(s) 55, 298
LmnI GCTCC 2 cut(s) 68, 78
LpnPI CCDG 8 cut(s) 24, 45, 72, 75, 89, 99, 198, 319
LweI GCATC 1 cut(s) 23
MaeIII GTNAC 1 cut(s) 239
MalI GATC 2 cut(s) 57, 300
MboI GATC 2 cut(s) 55, 298
MboII GAAGA 4 cut(s) 49, 127, 247, 293
MflI RGATCY 1 cut(s) 298
MhlI GDGCHC 1 cut(s) 105
MnlI CCTC 3 cut(s) 166, 200, 253
MroI TCCGGA 1 cut(s) 75
MseI TTAA 1 cut(s) 275
MslI CAYNNNNRTG 1 cut(s) 98
MspI CCGG 1 cut(s) 76
MspR9I CCNGG 2 cut(s) 60, 334
MvaI CCWGG 2 cut(s) 60, 334
NdeI CATATG 1 cut(s) 97
NdeII GATC 2 cut(s) 55, 298
NlaIV GGNNCC 1 cut(s) 64
NmuCI GTSAC 1 cut(s) 239
OliI CACNNNNGTG 1 cut(s) 98
PfoI TCCNGGA 1 cut(s) 332
Psp6I CCWGG 2 cut(s) 58, 332
PspGI CCWGG 2 cut(s) 58, 332
PspN4I GGNNCC 1 cut(s) 64
PstNI CAGNNNCTG 1 cut(s) 11
PsuI RGATCY 1 cut(s) 298
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
RseI CAYNNNNRTG 1 cut(s) 98
SaqAI TTAA 1 cut(s) 275
Sau3AI GATC 2 cut(s) 55, 298
ScrFI CCNGG 2 cut(s) 60, 334
SduI GDGCHC 1 cut(s) 105
SetI ASST 2 cut(s) 31, 317
SfaNI GCATC 1 cut(s) 23
SmiMI CAYNNNNRTG 1 cut(s) 98
SspI AATATT 1 cut(s) 324
StyD4I CCNGG 2 cut(s) 58, 332
TaqI TCGA 1 cut(s) 192
TatI WGTACW 1 cut(s) 48
Tru1I TTAA 1 cut(s) 275
Tru9I TTAA 1 cut(s) 275
TseFI GTSAC 1 cut(s) 239
Tsp45I GTSAC 1 cut(s) 239
TspDTI ATGAA 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.