RchiOBHm_Chr4g0392011

Exostosin family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
N/A
Physical Location & Seq
Reverse (-)
7438467 .. 7439370
904 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 198 bp
ATGGGCTCAGGGTCAAGAAGATGGAGATATAGTTGTGGGTTTCTCTCTGAAGAGTCTTCTGAGATAATGTTTTCTATTCTGAAATGGAAATGCTCATGGTCTATGATACCGGCGATTGCTTCTATTGTGGGATTGGTTTCACTAATGTTGGCTTCAAAAGTTCATCTGTTCTTCTTTCCATTAGTTCCTTCTTTCTAG

Protein Analysis

65

Amino Acids

7.35

Weight (kDa)

9.3

Isoelectric Point (pI)

63.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 69
AgsI TTSAA 1 cut(s) 156
BanII GRGCYC 1 cut(s) 8
BbsI GAAGAC 1 cut(s) 48
BccI CCATC 1 cut(s) 15
BfaI CTAG 1 cut(s) 196
BpiI GAAGAC 1 cut(s) 48
Bpu10I CCTNAGC 1 cut(s) 7
BsaXI ACNNNNNCTCC 2 cut(s) 16, 46
Bse118I RCCGGY 1 cut(s) 109
BseMII CTCAG 2 cut(s) 21, 51
BsiSI CCGG 1 cut(s) 110
Bsp1286I GDGCHC 1 cut(s) 8
BspCNI CTCAG 2 cut(s) 20, 52
BsrFI RCCGGY 1 cut(s) 109
BssAI RCCGGY 1 cut(s) 109
Bst6I CTCTTC 1 cut(s) 45
BstDEI CTNAG 2 cut(s) 7, 60
BstV2I GAAGAC 1 cut(s) 48
Cfr10I RCCGGY 1 cut(s) 109
CviAII CATG 1 cut(s) 96
CviJI RGCY 2 cut(s) 6, 152
CviKI_1 RGCY 2 cut(s) 6, 152
DdeI CTNAG 2 cut(s) 7, 60
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
Eco24I GRGCYC 1 cut(s) 8
Eco57I CTGAAG 1 cut(s) 69
EcoT38I GRGCYC 1 cut(s) 8
FaeI CATG 1 cut(s) 99
FaiI YATR 3 cut(s) 30, 97, 104
FatI CATG 1 cut(s) 95
FriOI GRGCYC 1 cut(s) 8
FspBI CTAG 1 cut(s) 196
HapII CCGG 1 cut(s) 110
Hin1II CATG 1 cut(s) 99
HinfI GANTC 1 cut(s) 53
HpaII CCGG 1 cut(s) 110
Hpy188I TCNGA 3 cut(s) 49, 61, 81
Hpy188III TCNNGA 1 cut(s) 15
HpyAV CCTTC 1 cut(s) 198
HpyF3I CTNAG 2 cut(s) 7, 60
Hsp92II CATG 1 cut(s) 99
LpnPI CCDG 1 cut(s) 123
MaeI CTAG 1 cut(s) 196
MboII GAAGA 4 cut(s) 30, 48, 62, 163
MhlI GDGCHC 1 cut(s) 8
MlyI GAGTC 1 cut(s) 62
MspI CCGG 1 cut(s) 110
NlaIII CATG 1 cut(s) 99
PleI GAGTC 1 cut(s) 61
PpsI GAGTC 1 cut(s) 61
SchI GAGTC 1 cut(s) 62
SduI GDGCHC 1 cut(s) 8
SgeI CNNG 4 cut(s) 21, 27, 108, 122
SspMI CTAG 1 cut(s) 196
TspDTI ATGAA 1 cut(s) 152
XspI CTAG 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.