RchiOBHm_Chr4g0395431

Aldo-keto reductase family 4 member

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
N/A
Physical Location & Seq
Forward (+)
11138102 .. 11138550
449 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 294 bp
ATGAAATTTGAGTCATTTTATACAGGGGAGTGCGAATCGGGTCACAGTGTGCTGCCCAAGAGCACAAAGGAGGCGAGTATCAAGGAGAATTTTGATGTTTTTGATTGGTCTATACCCAAAGATTTGGTTTCAAAGTTTCTTTTATCTAAAGCAGGCGTGCATCTCGTCTTTCTGTTCCCGAATTCCATTCATCTTTTGGTAGTATTGGAGAAGCTGCTTAAAGACATTGGATTCGTCAACGAGACTCACGTTTTCTACAAGAACATTGAGGAACTCTGGGATGGAGAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

11.16

Weight (kDa)

5.26

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 3 cut(s) 5, 88, 181
AdeI CACNNNGTG 1 cut(s) 49
AgsI TTSAA 1 cut(s) 132
AluBI AGCT 1 cut(s) 214
AluI AGCT 1 cut(s) 214
Alw21I GWGCWC 1 cut(s) 65
Alw26I GTCTC 1 cut(s) 236
ApeKI GCWGC 2 cut(s) 52, 214
ApoI RAATTY 3 cut(s) 5, 88, 181
ArsI GACNNNNNNTTYG 2 cut(s) 215, 247
Bbv12I GWGCWC 1 cut(s) 65
BbvI GCAGC 2 cut(s) 39, 201
BccI CCATC 1 cut(s) 275
BcoDI GTCTC 1 cut(s) 236
BisI GCNGC 2 cut(s) 53, 215
BlsI GCNGC 2 cut(s) 54, 216
BmsI GCATC 1 cut(s) 169
BseGI GGATG 1 cut(s) 286
BseXI GCAGC 2 cut(s) 39, 201
BsiHKAI GWGCWC 1 cut(s) 65
BsmAI GTCTC 1 cut(s) 236
Bsp1286I GDGCHC 1 cut(s) 65
Bst4CI ACNGT 1 cut(s) 47
BstC8I GCNNGC 2 cut(s) 154, 158
BstF5I GGATG 1 cut(s) 286
BstMAI GTCTC 1 cut(s) 236
BstV1I GCAGC 2 cut(s) 39, 201
BstXI CCANNNNNNTGG 1 cut(s) 124
BtsCI GGATG 1 cut(s) 286
BtsIMutI CAGTG 1 cut(s) 52
Cac8I GCNNGC 2 cut(s) 154, 158
CviJI RGCY 1 cut(s) 214
CviKI_1 RGCY 1 cut(s) 214
DraIII CACNNNGTG 1 cut(s) 49
EcoRI GAATTC 1 cut(s) 181
FaiI YATR 2 cut(s) 21, 113
Fnu4HI GCNGC 2 cut(s) 53, 215
Fsp4HI GCNGC 2 cut(s) 53, 215
GluI GCNGC 2 cut(s) 53, 215
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HinfI GANTC 4 cut(s) 11, 35, 231, 244
Hpy166II GTNNAC 1 cut(s) 238
Hpy188III TCNNGA 1 cut(s) 178
Hpy8I GTNNAC 1 cut(s) 238
HpyCH4III ACNGT 1 cut(s) 47
HpyCH4IV ACGT 1 cut(s) 249
HpyCH4V TGCA 1 cut(s) 160
HpySE526I ACGT 1 cut(s) 249
LpnPI CCDG 3 cut(s) 9, 138, 262
Lsp1109I GCAGC 2 cut(s) 39, 201
LweI GCATC 1 cut(s) 169
MaeII ACGT 1 cut(s) 249
MaeIII GTNAC 1 cut(s) 41
MhlI GDGCHC 1 cut(s) 65
MluCI AATT 3 cut(s) 5, 88, 181
MlyI GAGTC 2 cut(s) 20, 238
MnlI CCTC 2 cut(s) 64, 262
MseI TTAA 1 cut(s) 219
NmuCI GTSAC 1 cut(s) 41
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PfeI GAWTC 2 cut(s) 35, 231
PkrI GCNGC 2 cut(s) 54, 216
PleI GAGTC 2 cut(s) 19, 238
PpsI GAGTC 2 cut(s) 19, 238
SaqAI TTAA 1 cut(s) 219
SatI GCNGC 2 cut(s) 53, 215
SchI GAGTC 2 cut(s) 20, 238
SduI GDGCHC 1 cut(s) 65
SetI ASST 2 cut(s) 216, 252
SfaNI GCATC 1 cut(s) 169
Sse9I AATT 3 cut(s) 5, 88, 181
TaaI ACNGT 1 cut(s) 47
TaiI ACGT 1 cut(s) 252
TasI AATT 3 cut(s) 5, 88, 181
TfiI GAWTC 2 cut(s) 35, 231
Tru1I TTAA 1 cut(s) 219
Tru9I TTAA 1 cut(s) 219
TscAI CASTG 1 cut(s) 52
TseFI GTSAC 1 cut(s) 41
TseI GCWGC 2 cut(s) 52, 214
Tsp45I GTSAC 1 cut(s) 41
TspDTI ATGAA 2 cut(s) 17, 179
TspRI CASTG 1 cut(s) 52
XapI RAATTY 3 cut(s) 5, 88, 181
XcmI CCANNNNNNNNNTGG 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.