RchiOBHm_Chr4g0410031

histone-lysine N-methyltransferase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
N/A
Physical Location & Seq
Forward (+)
33672761 .. 33673618
858 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 267 bp
ATGCAAGGCCAAACAGCTTTTAACCTTCTTCTTTGGACGTCTCTTACTTTTGCATCTCTTCTTTGCCATGGATGGGGAGAAAAATGTACTACAAATGATCATGCTCCAACTGAGCAACAGTCTCAAATTGACTCTTTGCCCGTGAAATCTGACCACTTTTTCGTTTTCATGACTGTTGTTCCCAGTGGGAAGGCTAGGACTTCATTGATATTATCCTATCTTACACCAACTTCATTGGCTCTGCCATTTTTTTTTTGTAACTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

88

Amino Acids

9.79

Weight (kDa)

6.22

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 41
AcyI GRCGYC 1 cut(s) 38
AfaI GTAC 1 cut(s) 88
AfiI CCNNNNNNNGG 1 cut(s) 73
AluBI AGCT 1 cut(s) 17
AluI AGCT 1 cut(s) 17
Alw26I GTCTC 2 cut(s) 45, 126
AoxI GGCC 1 cut(s) 7
ArsI GACNNNNNNTTYG 2 cut(s) 143, 175
BccI CCATC 1 cut(s) 66
BclI TGATCA 1 cut(s) 97
BcoDI GTCTC 2 cut(s) 45, 126
BfaI CTAG 1 cut(s) 195
BmrI ACTGGG 1 cut(s) 177
BmsI GCATC 1 cut(s) 62
BmuI ACTGGG 1 cut(s) 177
BsaHI GRCGYC 1 cut(s) 38
BsaJI CCNNGG 1 cut(s) 67
Bsc4I CCNNNNNNNGG 1 cut(s) 73
Bse1I ACTGG 1 cut(s) 183
BseDI CCNNGG 1 cut(s) 67
BseGI GGATG 1 cut(s) 77
BseLI CCNNNNNNNGG 1 cut(s) 73
BseMII CTCAG 1 cut(s) 102
BseNI ACTGG 1 cut(s) 183
BshFI GGCC 1 cut(s) 9
BslI CCNNNNNNNGG 1 cut(s) 73
BsmAI GTCTC 2 cut(s) 45, 126
BsmBI CGTCTC 1 cut(s) 45
BsnI GGCC 1 cut(s) 9
Bsp143I GATC 1 cut(s) 97
Bsp19I CCATGG 1 cut(s) 67
BspANI GGCC 1 cut(s) 9
BspCNI CTCAG 1 cut(s) 103
BspHI TCATGA 1 cut(s) 168
BsrI ACTGG 1 cut(s) 183
BssECI CCNNGG 1 cut(s) 67
BssMI GATC 1 cut(s) 97
BssNI GRCGYC 1 cut(s) 38
BssT1I CCWWGG 1 cut(s) 67
Bst4CI ACNGT 3 cut(s) 120, 175, 263
Bst6I CTCTTC 1 cut(s) 63
BstACI GRCGYC 1 cut(s) 38
BstDEI CTNAG 1 cut(s) 111
BstDSI CCRYGG 1 cut(s) 67
BstF5I GGATG 1 cut(s) 77
BstKTI GATC 1 cut(s) 100
BstMAI GTCTC 2 cut(s) 45, 126
BstMBI GATC 1 cut(s) 97
BsuRI GGCC 1 cut(s) 9
BtgI CCRYGG 1 cut(s) 67
BtsCI GGATG 1 cut(s) 77
BtsIMutI CAGTG 1 cut(s) 190
CciI TCATGA 1 cut(s) 168
Csp6I GTAC 1 cut(s) 87
CviAII CATG 3 cut(s) 68, 101, 169
CviJI RGCY 4 cut(s) 9, 17, 194, 239
CviKI_1 RGCY 4 cut(s) 9, 17, 194, 239
CviQI GTAC 1 cut(s) 87
DdeI CTNAG 1 cut(s) 111
DpnI GATC 1 cut(s) 99
DpnII GATC 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 63
EarI CTCTTC 1 cut(s) 63
Eco130I CCWWGG 1 cut(s) 67
EcoT14I CCWWGG 1 cut(s) 67
ErhI CCWWGG 1 cut(s) 67
Esp3I CGTCTC 1 cut(s) 45
FaeI CATG 3 cut(s) 71, 104, 172
FaiI YATR 3 cut(s) 69, 102, 170
FatI CATG 3 cut(s) 67, 100, 168
FbaI TGATCA 1 cut(s) 97
FokI GGATG 1 cut(s) 84
FspBI CTAG 1 cut(s) 195
HaeIII GGCC 1 cut(s) 9
Hin1I GRCGYC 1 cut(s) 38
Hin1II CATG 3 cut(s) 71, 104, 172
HinfI GANTC 1 cut(s) 131
Hpy188I TCNGA 1 cut(s) 151
Hpy188III TCNNGA 1 cut(s) 169
HpyAV CCTTC 2 cut(s) 35, 184
HpyCH4III ACNGT 3 cut(s) 120, 175, 263
HpyCH4IV ACGT 1 cut(s) 38
HpyCH4V TGCA 2 cut(s) 4, 53
HpyF3I CTNAG 1 cut(s) 111
HpySE526I ACGT 1 cut(s) 38
Hsp92I GRCGYC 1 cut(s) 38
Hsp92II CATG 3 cut(s) 71, 104, 172
Ksp22I TGATCA 1 cut(s) 97
Kzo9I GATC 1 cut(s) 97
LmnI GCTCC 1 cut(s) 109
LpnPI CCDG 1 cut(s) 196
LweI GCATC 1 cut(s) 62
MaeI CTAG 1 cut(s) 195
MaeII ACGT 1 cut(s) 38
MaeIII GTNAC 1 cut(s) 257
MalI GATC 1 cut(s) 99
MboI GATC 1 cut(s) 97
MboII GAAGA 2 cut(s) 20, 50
MluCI AATT 1 cut(s) 126
MlyI GAGTC 1 cut(s) 125
MmeI TCCRAC 1 cut(s) 131
MseI TTAA 1 cut(s) 21
NcoI CCATGG 1 cut(s) 67
NdeII GATC 1 cut(s) 97
NlaIII CATG 3 cut(s) 71, 104, 172
PagI TCATGA 1 cut(s) 168
PleI GAGTC 1 cut(s) 125
PpsI GAGTC 1 cut(s) 125
RsaI GTAC 1 cut(s) 88
RsaNI GTAC 1 cut(s) 87
SaqAI TTAA 1 cut(s) 21
Sau3AI GATC 1 cut(s) 97
SchI GAGTC 1 cut(s) 125
SetI ASST 3 cut(s) 19, 27, 41
SfaNI GCATC 1 cut(s) 62
SgeI CNNG 8 cut(s) 17, 80, 113, 152, 154, 181, 195, 207
Sse9I AATT 1 cut(s) 126
SspMI CTAG 1 cut(s) 195
StyI CCWWGG 1 cut(s) 67
TaaI ACNGT 3 cut(s) 120, 175, 263
TaiI ACGT 1 cut(s) 41
TasI AATT 1 cut(s) 126
TatI WGTACW 1 cut(s) 86
Tru1I TTAA 1 cut(s) 21
Tru9I TTAA 1 cut(s) 21
TscAI CASTG 1 cut(s) 190
TspDTI ATGAA 3 cut(s) 157, 192, 222
TspRI CASTG 1 cut(s) 190
XspI CTAG 1 cut(s) 195
ZraI GACGTC 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.