RchiOBHm_Chr4g0412041

Protein of unknown function (DUF962)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
N/A
Physical Location & Seq
Forward (+)
35787207 .. 35787374
168 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 168 bp
ATGGGTTTGCTTGGTACAACCATTTCTTTATCGAAAAATATTCCAGCGATGTTTGGGCATCCGGTTTGGTCTCTGTTCTGTGATTACAAGATGTTTGGATTGATGCTTACTGGGAATATGGACAAAGAGATCACAAGGCTTAAAGAGGCTTGTGTTCTAAACGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

55

Amino Acids

6.11

Weight (kDa)

7.8

Isoelectric Point (pI)

35.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 16
Alw26I GTCTC 1 cut(s) 75
BcoDI GTCTC 1 cut(s) 75
BmrI ACTGGG 1 cut(s) 120
BmsI GCATC 2 cut(s) 67, 93
BmuI ACTGGG 1 cut(s) 120
BsaI GGTCTC 1 cut(s) 75
BsaWI WCCGGW 1 cut(s) 61
Bse1I ACTGG 1 cut(s) 115
BseGI GGATG 1 cut(s) 58
BseNI ACTGG 1 cut(s) 115
BsiSI CCGG 1 cut(s) 62
BsmAI GTCTC 1 cut(s) 75
Bso31I GGTCTC 1 cut(s) 75
Bsp143I GATC 1 cut(s) 129
BspTNI GGTCTC 1 cut(s) 75
BsrI ACTGG 1 cut(s) 115
BssMI GATC 1 cut(s) 129
BstDEI CTNAG 1 cut(s) 165
BstF5I GGATG 1 cut(s) 58
BstKTI GATC 1 cut(s) 132
BstMAI GTCTC 1 cut(s) 75
BstMBI GATC 1 cut(s) 129
BtgZI GCGATG 1 cut(s) 62
BtsCI GGATG 1 cut(s) 58
Csp6I GTAC 1 cut(s) 15
CviJI RGCY 2 cut(s) 139, 149
CviKI_1 RGCY 2 cut(s) 139, 149
CviQI GTAC 1 cut(s) 15
DdeI CTNAG 1 cut(s) 165
DpnI GATC 1 cut(s) 131
DpnII GATC 1 cut(s) 129
Eco31I GGTCTC 1 cut(s) 75
FaiI YATR 1 cut(s) 119
FokI GGATG 1 cut(s) 45
HapII CCGG 1 cut(s) 62
HpaII CCGG 1 cut(s) 62
HpyF3I CTNAG 1 cut(s) 165
Kzo9I GATC 1 cut(s) 129
LpnPI CCDG 3 cut(s) 57, 75, 96
LweI GCATC 2 cut(s) 67, 93
MalI GATC 1 cut(s) 131
MboI GATC 1 cut(s) 129
MnlI CCTC 1 cut(s) 139
MseI TTAA 1 cut(s) 141
MspI CCGG 1 cut(s) 62
NdeII GATC 1 cut(s) 129
RsaI GTAC 1 cut(s) 16
RsaNI GTAC 1 cut(s) 15
SaqAI TTAA 1 cut(s) 141
Sau3AI GATC 1 cut(s) 129
SfaNI GCATC 2 cut(s) 67, 93
SgeI CNNG 7 cut(s) 23, 56, 74, 100, 123, 147, 162
SspI AATATT 1 cut(s) 40
TaqI TCGA 1 cut(s) 32
Tru1I TTAA 1 cut(s) 141
Tru9I TTAA 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.