RchiOBHm_Chr4g0418641

hydrolase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
N/A
Physical Location & Seq
Forward (+)
44069795 .. 44071416
1622 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 258 bp
ATGGTCTCCCCGAGAAGTTCTTGCGTGGGGCAGCGGGCAGCCGCACGGACGCGTGGTGCAGCTGAAAAAGGATATGAGGATGCCAAATCAGTGCTTGCTGCTCTAAAGAGTCAAGGTGTTTCTGCAATAGGAGCTGCAGGATTTTGCTGGGGAGGTAAACCCTTCATTACTAACATGAAGTGGGGCTTGCTCACATTTTTTTTTTCAGGGAATGTAGTGGCCAAACTTGCAAAATCTGATGACATTAAGGCCCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

85

Amino Acids

8.87

Weight (kDa)

9.94

Isoelectric Point (pI)

20.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 52
AciI CCGC 2 cut(s) 34, 42
AcoI YGGCCR 1 cut(s) 219
AflIII ACRYGT 1 cut(s) 50
AluBI AGCT 2 cut(s) 62, 134
AluI AGCT 2 cut(s) 62, 134
Alw26I GTCTC 1 cut(s) 10
Ama87I CYCGRG 1 cut(s) 10
AoxI GGCC 2 cut(s) 219, 249
ApeKI GCWGC 5 cut(s) 31, 38, 59, 98, 134
AspS9I GGNCC 1 cut(s) 250
AvaI CYCGRG 1 cut(s) 10
BalI TGGCCA 1 cut(s) 221
BbvI GCAGC 5 cut(s) 43, 50, 71, 85, 121
BcoDI GTCTC 1 cut(s) 10
BfmI CTRYAG 1 cut(s) 135
BisI GCNGC 6 cut(s) 32, 39, 42, 60, 99, 135
BlsI GCNGC 6 cut(s) 33, 40, 43, 61, 100, 136
BmeT110I CYCGRG 1 cut(s) 10
BmgT120I GGNCC 1 cut(s) 250
BmsI GCATC 1 cut(s) 70
BsaI GGTCTC 1 cut(s) 10
BseGI GGATG 1 cut(s) 85
BseXI GCAGC 5 cut(s) 43, 50, 71, 85, 121
BseYI CCCAGC 1 cut(s) 147
BsgI GTGCAG 1 cut(s) 78
Bsh1236I CGCG 1 cut(s) 52
BshFI GGCC 2 cut(s) 221, 251
BsiHKCI CYCGRG 1 cut(s) 10
BsmAI GTCTC 1 cut(s) 10
BsnI GGCC 2 cut(s) 221, 251
Bso31I GGTCTC 1 cut(s) 10
BsoBI CYCGRG 1 cut(s) 10
BspACI CCGC 2 cut(s) 34, 42
BspANI GGCC 2 cut(s) 221, 251
BspFNI CGCG 1 cut(s) 52
BspMAI CTGCAG 1 cut(s) 139
BspTNI GGTCTC 1 cut(s) 10
BstC8I GCNNGC 3 cut(s) 36, 96, 188
BstF5I GGATG 1 cut(s) 85
BstFNI CGCG 1 cut(s) 52
BstMAI GTCTC 1 cut(s) 10
BstMWI GCNNNNNNNGC 2 cut(s) 131, 227
BstSFI CTRYAG 1 cut(s) 135
BstUI CGCG 1 cut(s) 52
BstV1I GCAGC 5 cut(s) 43, 50, 71, 85, 121
BsuRI GGCC 2 cut(s) 221, 251
BtsCI GGATG 1 cut(s) 85
BtsIMutI CAGTG 1 cut(s) 96
Cac8I GCNNGC 3 cut(s) 36, 96, 188
Cfr13I GGNCC 1 cut(s) 250
CseI GACGC 1 cut(s) 58
CviAII CATG 1 cut(s) 175
CviJI RGCY 6 cut(s) 41, 62, 134, 186, 221, 251
CviKI_1 RGCY 6 cut(s) 41, 62, 134, 186, 221, 251
EaeI YGGCCR 1 cut(s) 219
Eco31I GGTCTC 1 cut(s) 10
Eco88I CYCGRG 1 cut(s) 10
EcoO109I RGGNCCY 1 cut(s) 250
FaeI CATG 1 cut(s) 178
FaiI YATR 2 cut(s) 75, 176
FalI AAGNNNNNCTT 2 cut(s) 170, 202
FatI CATG 1 cut(s) 174
FauI CCCGC 1 cut(s) 27
Fnu4HI GCNGC 6 cut(s) 32, 39, 42, 60, 99, 135
FokI GGATG 1 cut(s) 92
Fsp4HI GCNGC 6 cut(s) 32, 39, 42, 60, 99, 135
GluI GCNGC 6 cut(s) 32, 39, 42, 60, 99, 135
GsaI CCCAGC 1 cut(s) 151
HaeIII GGCC 2 cut(s) 221, 251
HgaI GACGC 1 cut(s) 58
Hin1II CATG 1 cut(s) 178
HinfI GANTC 1 cut(s) 109
Hpy166II GTNNAC 1 cut(s) 158
Hpy188I TCNGA 1 cut(s) 238
Hpy8I GTNNAC 1 cut(s) 158
HpyAV CCTTC 1 cut(s) 172
HpyCH4V TGCA 4 cut(s) 59, 125, 137, 230
HpyF10VI GCNNNNNNNGC 2 cut(s) 131, 227
Hsp92II CATG 1 cut(s) 178
LmnI GCTCC 1 cut(s) 131
LpnPI CCDG 3 cut(s) 123, 133, 192
Lsp1109I GCAGC 5 cut(s) 43, 50, 71, 85, 121
LweI GCATC 1 cut(s) 70
MlsI TGGCCA 1 cut(s) 221
MluI ACGCGT 1 cut(s) 50
MluNI TGGCCA 1 cut(s) 221
MlyI GAGTC 1 cut(s) 118
MnlI CCTC 2 cut(s) 70, 146
Mox20I TGGCCA 1 cut(s) 221
MscI TGGCCA 1 cut(s) 221
MseI TTAA 1 cut(s) 246
Msp20I TGGCCA 1 cut(s) 221
MspA1I CMGCKG 2 cut(s) 34, 62
MvnI CGCG 1 cut(s) 52
MwoI GCNNNNNNNGC 2 cut(s) 131, 227
NlaIII CATG 1 cut(s) 178
PkrI GCNGC 6 cut(s) 33, 40, 43, 61, 100, 136
PleI GAGTC 1 cut(s) 117
PpsI GAGTC 1 cut(s) 117
PspFI CCCAGC 1 cut(s) 147
PspPI GGNCC 1 cut(s) 250
PstI CTGCAG 1 cut(s) 139
PvuII CAGCTG 1 cut(s) 62
SaqAI TTAA 1 cut(s) 246
SatI GCNGC 6 cut(s) 32, 39, 42, 60, 99, 135
Sau96I GGNCC 1 cut(s) 250
SchI GAGTC 1 cut(s) 118
SetI ASST 4 cut(s) 64, 118, 136, 157
SfaNI GCATC 1 cut(s) 70
SfcI CTRYAG 1 cut(s) 135
SsiI CCGC 2 cut(s) 34, 42
TauI GCSGC 1 cut(s) 44
Tru1I TTAA 1 cut(s) 246
Tru9I TTAA 1 cut(s) 246
TscAI CASTG 1 cut(s) 96
TseI GCWGC 5 cut(s) 31, 38, 59, 98, 134
TspDTI ATGAA 2 cut(s) 154, 191
TspGWI ACGGA 1 cut(s) 61
TspRI CASTG 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.