RchiOBHm_Chr3g0462051

oxidoreductase activity, acting on a sulfur group of donors

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
N/A
Physical Location & Seq
Forward (+)
9879639 .. 9880461
823 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 306 bp
ATGCCATTTTGTGCCAGGTCCTATGTCTATCTCTATCATATTCATACCAATGGCCCAGATGAATGCTACTTGAACACTATACAAGCCTGTGGAATCGACGTCTGGAGAGTTGTGCTTGAACAAAAATTTGGTAATGAAACCATGCACCTTAGTCCACCTCTTGAGTTTGTGCCATGGCTGGTTGTGAATGATCAACCAATTGGAAATCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCAAATTCCTGTGTGTGTTGTGTGTGTATTAATATTGTTGGGATTTTCAAGCTATTGCTCATAA

Protein Analysis

101

Amino Acids

11.3

Weight (kDa)

4.97

Isoelectric Point (pI)

63.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 102
AcsI RAATTY 2 cut(s) 125, 246
AcyI GRCGYC 1 cut(s) 99
AgsI TTSAA 3 cut(s) 73, 119, 291
AjnI CCWGG 1 cut(s) 14
AjuI GAANNNNNNNTTGG 2 cut(s) 111, 143
AluBI AGCT 1 cut(s) 294
AluI AGCT 1 cut(s) 294
AoxI GGCC 1 cut(s) 52
ApoI RAATTY 2 cut(s) 125, 246
AseI ATTAAT 1 cut(s) 272
AspS9I GGNCC 2 cut(s) 18, 53
AvaII GGWCC 1 cut(s) 18
BciT130I CCWGG 1 cut(s) 16
BclI TGATCA 1 cut(s) 190
Bme1390I CCNGG 1 cut(s) 16
Bme18I GGWCC 1 cut(s) 18
BmgT120I GGNCC 2 cut(s) 18, 53
BmrFI CCNGG 1 cut(s) 16
BpmI CTGGAG 1 cut(s) 124
BpuEI CTTGAG 1 cut(s) 182
BsaHI GRCGYC 1 cut(s) 99
BsaJI CCNNGG 1 cut(s) 173
BseBI CCWGG 1 cut(s) 16
BseDI CCNNGG 1 cut(s) 173
BshFI GGCC 1 cut(s) 54
BsmI GAATGC 1 cut(s) 68
BsnI GGCC 1 cut(s) 54
Bsp143I GATC 1 cut(s) 190
Bsp19I CCATGG 1 cut(s) 173
BspANI GGCC 1 cut(s) 54
BssECI CCNNGG 1 cut(s) 173
BssMI GATC 1 cut(s) 190
BssNI GRCGYC 1 cut(s) 99
BssT1I CCWWGG 1 cut(s) 173
Bst2UI CCWGG 1 cut(s) 16
BstACI GRCGYC 1 cut(s) 99
BstDEI CTNAG 1 cut(s) 149
BstDSI CCRYGG 1 cut(s) 173
BstKTI GATC 1 cut(s) 193
BstMBI GATC 1 cut(s) 190
BstNI CCWGG 1 cut(s) 16
BstSCI CCNGG 1 cut(s) 14
BsuRI GGCC 1 cut(s) 54
BtgI CCRYGG 1 cut(s) 173
Cfr13I GGNCC 2 cut(s) 18, 53
CviAII CATG 2 cut(s) 142, 174
CviJI RGCY 4 cut(s) 54, 86, 178, 294
CviKI_1 RGCY 4 cut(s) 54, 86, 178, 294
DdeI CTNAG 1 cut(s) 149
DpnI GATC 1 cut(s) 192
DpnII GATC 1 cut(s) 190
Eco130I CCWWGG 1 cut(s) 173
Eco47I GGWCC 1 cut(s) 18
EcoO109I RGGNCCY 1 cut(s) 18
EcoRII CCWGG 1 cut(s) 14
EcoT14I CCWWGG 1 cut(s) 173
ErhI CCWWGG 1 cut(s) 173
FaeI CATG 2 cut(s) 145, 177
FaiI YATR 7 cut(s) 24, 39, 45, 80, 143, 175, 304
FatI CATG 2 cut(s) 141, 173
FbaI TGATCA 1 cut(s) 190
GsuI CTGGAG 1 cut(s) 124
HaeIII GGCC 1 cut(s) 54
Hin1I GRCGYC 1 cut(s) 99
Hin1II CATG 2 cut(s) 145, 177
HinfI GANTC 1 cut(s) 93
Hpy166II GTNNAC 1 cut(s) 155
Hpy188III TCNNGA 2 cut(s) 103, 161
Hpy8I GTNNAC 1 cut(s) 155
Hpy99I CGWCG 1 cut(s) 101
HpyCH4IV ACGT 1 cut(s) 99
HpyCH4V TGCA 1 cut(s) 145
HpyF3I CTNAG 1 cut(s) 149
HpySE526I ACGT 1 cut(s) 99
Hsp92I GRCGYC 1 cut(s) 99
Hsp92II CATG 2 cut(s) 145, 177
Ksp22I TGATCA 1 cut(s) 190
Kzo9I GATC 1 cut(s) 190
LpnPI CCDG 6 cut(s) 28, 69, 88, 100, 164, 264
MaeII ACGT 1 cut(s) 99
MalI GATC 1 cut(s) 192
MboI GATC 1 cut(s) 190
MfeI CAATTG 1 cut(s) 198
MluCI AATT 3 cut(s) 125, 198, 246
MnlI CCTC 7 cut(s) 168, 230, 234, 238, 242, 246, 250
MseI TTAA 1 cut(s) 272
MslI CAYNNNNRTG 1 cut(s) 48
MspR9I CCNGG 1 cut(s) 16
MunI CAATTG 1 cut(s) 198
Mva1269I GAATGC 1 cut(s) 68
MvaI CCWGG 1 cut(s) 16
NcoI CCATGG 1 cut(s) 173
NdeII GATC 1 cut(s) 190
NlaIII CATG 2 cut(s) 145, 177
PctI GAATGC 1 cut(s) 68
PfeI GAWTC 1 cut(s) 93
PpuMI RGGWCCY 1 cut(s) 18
PshBI ATTAAT 1 cut(s) 272
Psp5II RGGWCCY 1 cut(s) 18
Psp6I CCWGG 1 cut(s) 14
PspGI CCWGG 1 cut(s) 14
PspPI GGNCC 2 cut(s) 18, 53
PspPPI RGGWCCY 1 cut(s) 18
RseI CAYNNNNRTG 1 cut(s) 48
SaqAI TTAA 1 cut(s) 272
Sau3AI GATC 1 cut(s) 190
Sau96I GGNCC 2 cut(s) 18, 53
ScrFI CCNGG 1 cut(s) 16
SetI ASST 5 cut(s) 20, 102, 150, 160, 296
SinI GGWCC 1 cut(s) 18
SmiMI CAYNNNNRTG 1 cut(s) 48
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
Sse9I AATT 3 cut(s) 125, 198, 246
SspI AATATT 1 cut(s) 276
StyD4I CCNGG 1 cut(s) 14
StyI CCWWGG 1 cut(s) 173
TaiI ACGT 1 cut(s) 102
TaqI TCGA 1 cut(s) 96
TasI AATT 3 cut(s) 125, 198, 246
TfiI GAWTC 1 cut(s) 93
Tru1I TTAA 1 cut(s) 272
Tru9I TTAA 1 cut(s) 272
TspDTI ATGAA 3 cut(s) 32, 75, 150
VpaK11BI GGWCC 1 cut(s) 18
VspI ATTAAT 1 cut(s) 272
XapI RAATTY 2 cut(s) 125, 246
ZraI GACGTC 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.