RchiOBHm_Chr3g0470761
MYB Family

adenylyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
N/A
Physical Location & Seq
Forward (+)
16719848 .. 16721126
1279 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 219 bp
ATGGGGGGCGACAATCACACTGGGGTTAACTCTTTCTGTGAAAACAAGGCATTACAGTTGTTTAATTTGTTCTTTTCAGTACTTGTTCCAGGTGTCATGGATATCCCTCTGCCTCTTAGTAAATTGGCTATGCATCTGGTTAATCATGACGACAATTGTTTATCACTTATCTGGTATTATATCACTGCTATATGGTTTTGTTTGGTGCTATTGGAATGA

Protein Analysis

72

Amino Acids

8.16

Weight (kDa)

4.97

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 81
AjnI CCWGG 1 cut(s) 88
BciT130I CCWGG 1 cut(s) 90
BmcAI AGTACT 1 cut(s) 81
Bme1390I CCNGG 1 cut(s) 90
BmrFI CCNGG 1 cut(s) 90
BmrI ACTGGG 1 cut(s) 30
BmsI GCATC 1 cut(s) 142
BmuI ACTGGG 1 cut(s) 30
Bse1I ACTGG 1 cut(s) 25
BseBI CCWGG 1 cut(s) 90
BseNI ACTGG 1 cut(s) 25
BspHI TCATGA 1 cut(s) 145
BsrI ACTGG 1 cut(s) 25
Bst2UI CCWGG 1 cut(s) 90
Bst4CI ACNGT 1 cut(s) 57
BstDEI CTNAG 1 cut(s) 116
BstNI CCWGG 1 cut(s) 90
BstSCI CCNGG 1 cut(s) 88
BtsI GCAGTG 1 cut(s) 183
BtsIMutI CAGTG 2 cut(s) 18, 183
CciI TCATGA 1 cut(s) 145
Csp6I GTAC 1 cut(s) 80
CviAII CATG 2 cut(s) 97, 146
CviJI RGCY 1 cut(s) 128
CviKI_1 RGCY 1 cut(s) 128
CviQI GTAC 1 cut(s) 80
DdeI CTNAG 1 cut(s) 116
Eco32I GATATC 1 cut(s) 103
EcoRII CCWGG 1 cut(s) 88
EcoRV GATATC 1 cut(s) 103
EcoT22I ATGCAT 1 cut(s) 135
FaeI CATG 2 cut(s) 100, 149
FaiI YATR 6 cut(s) 98, 131, 147, 180, 191, 193
FatI CATG 2 cut(s) 96, 145
Hin1II CATG 2 cut(s) 100, 149
HincII GTYRAC 1 cut(s) 28
HindII GTYRAC 1 cut(s) 28
HpaI GTTAAC 1 cut(s) 28
Hpy166II GTNNAC 1 cut(s) 28
Hpy188III TCNNGA 1 cut(s) 146
Hpy8I GTNNAC 1 cut(s) 28
HpyCH4III ACNGT 1 cut(s) 57
HpyCH4V TGCA 1 cut(s) 133
HpyF3I CTNAG 1 cut(s) 116
Hsp92II CATG 2 cut(s) 100, 149
KspAI GTTAAC 1 cut(s) 28
LpnPI CCDG 5 cut(s) 6, 75, 102, 122, 157
LweI GCATC 1 cut(s) 142
MfeI CAATTG 1 cut(s) 154
MluCI AATT 3 cut(s) 64, 122, 154
MnlI CCTC 2 cut(s) 117, 123
Mph1103I ATGCAT 1 cut(s) 135
MseI TTAA 3 cut(s) 27, 63, 141
MspR9I CCNGG 1 cut(s) 90
MunI CAATTG 1 cut(s) 154
MvaI CCWGG 1 cut(s) 90
NlaIII CATG 2 cut(s) 100, 149
NsiI ATGCAT 1 cut(s) 135
PagI TCATGA 1 cut(s) 145
Psp6I CCWGG 1 cut(s) 88
PspGI CCWGG 1 cut(s) 88
RsaI GTAC 1 cut(s) 81
RsaNI GTAC 1 cut(s) 80
SaqAI TTAA 3 cut(s) 27, 63, 141
ScaI AGTACT 1 cut(s) 81
ScrFI CCNGG 1 cut(s) 90
SetI ASST 1 cut(s) 94
SfaNI GCATC 1 cut(s) 142
SgeI CNNG 9 cut(s) 33, 58, 95, 101, 102, 109, 149, 158, 184
Sse9I AATT 3 cut(s) 64, 122, 154
StyD4I CCNGG 1 cut(s) 88
TaaI ACNGT 1 cut(s) 57
TasI AATT 3 cut(s) 64, 122, 154
TatI WGTACW 1 cut(s) 79
Tru1I TTAA 3 cut(s) 27, 63, 141
Tru9I TTAA 3 cut(s) 27, 63, 141
TscAI CASTG 2 cut(s) 25, 190
TspRI CASTG 2 cut(s) 25, 190
ZrmI AGTACT 1 cut(s) 81
Zsp2I ATGCAT 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.