RchiOBHm_Chr2g0096201

Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Reverse (-)
9041646 .. 9041893
248 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 186 bp
ATGGAGGAGGCCATGTTTCTCACCAAGTATGGGTCTGAAGTTAACACAATCCACAGGAGTGACACGTTTAGGGCTTCGAAGATTACGCAGAACAGGGCTCTCAGTAACCCTAAAATAAAGTGCTTTGGAATTCTGAGGTGGTGGAGGCATATGGGGAAGGAAAGAAGGGGCTTCTTGCAGGTTTGA

Protein Analysis

61

Amino Acids

7.27

Weight (kDa)

10.59

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 169
AcsI RAATTY 1 cut(s) 129
AcuI CTGAAG 1 cut(s) 57
AfiI CCNNNNNNNGG 1 cut(s) 30
AflIII ACRYGT 1 cut(s) 63
AleI CACNNNNGTG 1 cut(s) 57
AoxI GGCC 1 cut(s) 9
ApoI RAATTY 1 cut(s) 129
AsuHPI GGTGA 1 cut(s) 13
AsuII TTCGAA 1 cut(s) 77
BanII GRGCYC 1 cut(s) 100
BfuAI ACCTGC 1 cut(s) 169
Bpu14I TTCGAA 1 cut(s) 77
BsaXI ACNNNNNCTCC 1 cut(s) 29
Bsc4I CCNNNNNNNGG 1 cut(s) 30
BseLI CCNNNNNNNGG 1 cut(s) 30
BseMII CTCAG 2 cut(s) 115, 125
BseRI GAGGAG 1 cut(s) 20
BshFI GGCC 1 cut(s) 11
BslI CCNNNNNNNGG 1 cut(s) 30
BsnI GGCC 1 cut(s) 11
Bsp119I TTCGAA 1 cut(s) 77
Bsp1286I GDGCHC 1 cut(s) 100
BspANI GGCC 1 cut(s) 11
BspCNI CTCAG 2 cut(s) 114, 126
BspMI ACCTGC 1 cut(s) 169
BspT104I TTCGAA 1 cut(s) 77
BstBI TTCGAA 1 cut(s) 77
BstDEI CTNAG 2 cut(s) 101, 134
BsuRI GGCC 1 cut(s) 11
BveI ACCTGC 1 cut(s) 169
CviAII CATG 1 cut(s) 13
CviJI RGCY 4 cut(s) 11, 74, 98, 171
CviKI_1 RGCY 4 cut(s) 11, 74, 98, 171
DdeI CTNAG 2 cut(s) 101, 134
Eco24I GRGCYC 1 cut(s) 100
Eco57I CTGAAG 1 cut(s) 57
EcoRI GAATTC 1 cut(s) 129
EcoT38I GRGCYC 1 cut(s) 100
FaeI CATG 1 cut(s) 16
FaiI YATR 4 cut(s) 14, 30, 150, 152
FatI CATG 1 cut(s) 12
FauNDI CATATG 1 cut(s) 150
FriOI GRGCYC 1 cut(s) 100
HaeIII GGCC 1 cut(s) 11
Hin1II CATG 1 cut(s) 16
HincII GTYRAC 1 cut(s) 43
HindII GTYRAC 1 cut(s) 43
HpaI GTTAAC 1 cut(s) 43
HphI GGTGA 1 cut(s) 13
Hpy166II GTNNAC 1 cut(s) 43
Hpy188I TCNGA 2 cut(s) 37, 135
Hpy8I GTNNAC 1 cut(s) 43
HpyAV CCTTC 2 cut(s) 151, 159
HpyCH4IV ACGT 1 cut(s) 65
HpyCH4V TGCA 1 cut(s) 178
HpyF3I CTNAG 2 cut(s) 101, 134
HpySE526I ACGT 1 cut(s) 65
Hsp92II CATG 1 cut(s) 16
KspAI GTTAAC 1 cut(s) 43
LpnPI CCDG 3 cut(s) 40, 79, 164
MaeII ACGT 1 cut(s) 65
MaeIII GTNAC 2 cut(s) 59, 104
MboII GAAGA 1 cut(s) 91
MhlI GDGCHC 1 cut(s) 100
MluCI AATT 1 cut(s) 129
MnlI CCTC 2 cut(s) 129, 138
MseI TTAA 1 cut(s) 42
MslI CAYNNNNRTG 1 cut(s) 57
NdeI CATATG 1 cut(s) 150
NlaIII CATG 1 cut(s) 16
NmuCI GTSAC 1 cut(s) 59
NspV TTCGAA 1 cut(s) 77
OliI CACNNNNGTG 1 cut(s) 57
RseI CAYNNNNRTG 1 cut(s) 57
SaqAI TTAA 1 cut(s) 42
SduI GDGCHC 1 cut(s) 100
SetI ASST 3 cut(s) 68, 140, 183
SfuI TTCGAA 1 cut(s) 77
SgeI CNNG 5 cut(s) 25, 37, 67, 76, 106
SmiMI CAYNNNNRTG 1 cut(s) 57
Sse9I AATT 1 cut(s) 129
TaiI ACGT 1 cut(s) 68
TaqI TCGA 1 cut(s) 77
TasI AATT 1 cut(s) 129
Tru1I TTAA 1 cut(s) 42
Tru9I TTAA 1 cut(s) 42
TseFI GTSAC 1 cut(s) 59
Tsp45I GTSAC 1 cut(s) 59
XapI RAATTY 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.