RchiOBHm_Chr2g0096211

Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
9041895 .. 9043315
1421 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1089 bp
ATGCAGTGCACTTCTCCTTTCACTGCCTTAACTCGTGGGAGACATCATTGCCGATTCTGTGGGGGATTTTCTGCAGAACATGTAGTAAAGGAAGGTGCTTGTTGCCTGTCAAGTTCAGGGAGAGGAATCCACAGATGGTCTGCGATGCCTGCTATGACAGGTTGGATCCTTTGCAGGGTATTCTTATTAACAGCATTAGCAAAGCATGACGCCATGGATTGGACATGTACAAGAGGATGGTTAAATCTTCCTGTTGGTTTCTCCATGGAACAAGAGATATACAAAGCAACCAACACATTGAGAAGTTACTCCCAGGTTTCTAGGCTGAATCCGGAGACGTCCATACACTTGGCTGTTCTCAAAGGAGCCAAAGGCTTGGCAATCCTAACCGTTACTAAACAAGTTGAGAATTCAGGCTGTTTTATACCCGAGATTTCAGAGAAAAATGAGGTTCTCAGGCCCAAACAAGTTGCTCAGTCTACTCAAAAAAGCTTGAAGCAAAGTTGGAGCCGCCGCCGCCGTTTCATTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCGCCACTGCGCCCAAGTTACCTTCCGCCATGAACGAATTGCAAGCTTTGAAAACCAAGGTCTGCATCATTGGCAACAGGCCAGGGCGCACACGGCGGTGATATATGCCGCCTGGGCCGAGCTGAAGCCAATTTTCTTTGAGGGATGGATGGCCAACGATATTGCCCCCGGCGGCCAGCTCGCCGCCACCTCTGACGTCAAGAACTTTCCGGGGTTTCCAGAAGGGATTCTCGGCATGGAGCTCATGGACCGCTGCTGGAGCCAATCAGTCCGGTTCAGTACTCAGATCTTCACCGAGACTGTTTCCAAGGTCGATTTCTCGTCGACGCCGTTTAAGGTCTACACCATTTCGAAAACAGTTCAGGCCGACGCTGTCATTGTTGCCATCACGAATCGGCTCGTCTTCCCTGGCTCTGGCGAGGGCAAGGGAGGCTTTTGGAACCGAGGTATTTCGGCCTGTGCCATTTGCGACGGAGCTGCTCCTATTTTCAGGAACAAACCGCCCCTTGGCGGTGATCCGAGGAGGTGA

Protein Analysis

362

Amino Acids

40.59

Weight (kDa)

9.55

Isoelectric Point (pI)

45.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029879)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0096211
rosa_multiflora Rmu_sc0005996.1_g000019

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 341, 759
AccB7I CCANNNNNTGG 1 cut(s) 219
AccI GTMKAC 3 cut(s) 479, 884, 900
AccIII TCCGGA 1 cut(s) 331
AclWI GGATC 3 cut(s) 160, 173, 1070
AcoI YGGCCR 2 cut(s) 711, 733
AcsI RAATTY 1 cut(s) 409
AcuI CTGAAG 1 cut(s) 704
AcyI GRCGYC 4 cut(s) 210, 338, 756, 887
AfaI GTAC 2 cut(s) 229, 841
AfiI CCNNNNNNNGG 5 cut(s) 175, 219, 974, 1067, 1070
AflIII ACRYGT 2 cut(s) 79, 224
AgsI TTSAA 2 cut(s) 496, 611
AjnI CCWGG 4 cut(s) 312, 641, 671, 967
AjuI GAANNNNNNNTTGG 2 cut(s) 860, 892
AleI CACNNNNGTG 1 cut(s) 656
AluBI AGCT 6 cut(s) 492, 606, 682, 739, 802, 1037
AluI AGCT 6 cut(s) 492, 606, 682, 739, 802, 1037
Alw21I GWGCWC 2 cut(s) 11, 804
Alw26I GTCTC 3 cut(s) 34, 329, 851
Alw44I GTGCAC 1 cut(s) 7
AlwI GGATC 3 cut(s) 160, 173, 1070
Ama87I CYCGRG 1 cut(s) 428
Aor13HI TCCGGA 1 cut(s) 331
AoxI GGCC 7 cut(s) 458, 639, 675, 711, 733, 924, 1014
ApaLI GTGCAC 1 cut(s) 7
ApeKI GCWGC 2 cut(s) 813, 1037
ApoI RAATTY 1 cut(s) 409
Asp700I GAANNNNTTC 1 cut(s) 786
AspLEI GCGC 2 cut(s) 572, 649
AspS9I GGNCC 3 cut(s) 459, 675, 808
AsuC2I CCSGG 2 cut(s) 729, 771
AsuHPI GGTGA 3 cut(s) 670, 844, 1085
AsuII TTCGAA 1 cut(s) 911
AvaI CYCGRG 1 cut(s) 428
AvaII GGWCC 1 cut(s) 808
BaeGI GKGCMC 1 cut(s) 11
BalI TGGCCA 1 cut(s) 713
BamHI GGATCC 1 cut(s) 165
BanII GRGCYC 1 cut(s) 804
BauI CACGAG 1 cut(s) 33
BbsI GAAGAC 1 cut(s) 955
Bbv12I GWGCWC 2 cut(s) 11, 804
BbvI GCAGC 2 cut(s) 800, 1024
BccI CCATC 5 cut(s) 129, 231, 699, 703, 953
BceAI ACGGC 3 cut(s) 504, 669, 874
BcgI CGANNNNNNTGC 2 cut(s) 1019, 1053
BciT130I CCWGG 4 cut(s) 314, 643, 673, 969
BcnI CCSGG 2 cut(s) 729, 771
BcoDI GTCTC 3 cut(s) 34, 329, 851
BfaI CTAG 1 cut(s) 321
BfmI CTRYAG 1 cut(s) 72
BglI GCCNNNNNGGC 1 cut(s) 674
BglII AGATCT 1 cut(s) 846
BisI GCNGC 8 cut(s) 511, 514, 517, 669, 733, 744, 814, 1038
BlsI GCNGC 8 cut(s) 512, 515, 518, 670, 734, 745, 815, 1039
BmcAI AGTACT 1 cut(s) 841
Bme1390I CCNGG 6 cut(s) 314, 643, 673, 729, 771, 969
Bme18I GGWCC 1 cut(s) 808
BmeT110I CYCGRG 1 cut(s) 428
BmgT120I GGNCC 3 cut(s) 459, 675, 808
BmiI GGNNCC 5 cut(s) 167, 367, 509, 821, 1001
BmrFI CCNGG 6 cut(s) 314, 643, 673, 729, 771, 969
BmsI GCATC 2 cut(s) 135, 634
BpiI GAAGAC 1 cut(s) 955
BpmI CTGGAG 1 cut(s) 838
Bpu14I TTCGAA 1 cut(s) 911
BpuMI CCSGG 2 cut(s) 729, 771
BsaHI GRCGYC 4 cut(s) 210, 338, 756, 887
BsaWI WCCGGW 2 cut(s) 331, 831
Bsc4I CCNNNNNNNGG 5 cut(s) 175, 219, 974, 1067, 1070
Bse3DI GCAATG 1 cut(s) 46
BseAI TCCGGA 1 cut(s) 331
BseBI CCWGG 4 cut(s) 314, 643, 673, 969
BseGI GGATG 3 cut(s) 242, 710, 714
BseLI CCNNNNNNNGG 5 cut(s) 175, 219, 974, 1067, 1070
BseMI GCAATG 1 cut(s) 46
BseMII CTCAG 3 cut(s) 469, 488, 857
BseSI GKGCMC 1 cut(s) 11
BseXI GCAGC 2 cut(s) 800, 1024
BshFI GGCC 7 cut(s) 460, 641, 677, 713, 735, 926, 1016
BsiHKAI GWGCWC 2 cut(s) 11, 804
BsiHKCI CYCGRG 1 cut(s) 428
BsiSI CCGG 4 cut(s) 332, 729, 770, 832
BslI CCNNNNNNNGG 5 cut(s) 175, 219, 974, 1067, 1070
BsmAI GTCTC 3 cut(s) 34, 329, 851
BsmBI CGTCTC 1 cut(s) 329
BsnI GGCC 7 cut(s) 460, 641, 677, 713, 735, 926, 1016
BsoBI CYCGRG 1 cut(s) 428
Bsp119I TTCGAA 1 cut(s) 911
Bsp1286I GDGCHC 2 cut(s) 11, 804
Bsp13I TCCGGA 1 cut(s) 331
Bsp1407I TGTACA 1 cut(s) 227
Bsp143I GATC 3 cut(s) 165, 846, 1075
Bsp19I CCATGG 2 cut(s) 213, 264
BspANI GGCC 7 cut(s) 460, 641, 677, 713, 735, 926, 1016
BspCNI CTCAG 3 cut(s) 468, 487, 856
BspEI TCCGGA 1 cut(s) 331
BspLI GGNNCC 5 cut(s) 167, 367, 509, 821, 1001
BspMAI CTGCAG 1 cut(s) 76
BspPI GGATC 3 cut(s) 160, 173, 1070
BspT104I TTCGAA 1 cut(s) 911
BsrDI GCAATG 1 cut(s) 46
BsrGI TGTACA 1 cut(s) 227
BssMI GATC 3 cut(s) 165, 846, 1075
BssNI GRCGYC 4 cut(s) 210, 338, 756, 887
BssSI CACGAG 1 cut(s) 33
BssT1I CCWWGG 5 cut(s) 213, 264, 616, 867, 1066
Bst2BI CACGAG 1 cut(s) 33
Bst2UI CCWGG 4 cut(s) 314, 643, 673, 969
Bst4CI ACNGT 3 cut(s) 391, 862, 919
BstACI GRCGYC 4 cut(s) 210, 338, 756, 887
BstAUI TGTACA 1 cut(s) 227
BstBI TTCGAA 1 cut(s) 911
BstC8I GCNNGC 4 cut(s) 150, 604, 737, 741
BstDEI CTNAG 3 cut(s) 455, 474, 843
BstDSI CCRYGG 2 cut(s) 213, 264
BstF5I GGATG 3 cut(s) 242, 710, 714
BstHHI GCGC 2 cut(s) 572, 649
BstKTI GATC 3 cut(s) 168, 849, 1078
BstMAI GTCTC 3 cut(s) 34, 329, 851
BstMBI GATC 3 cut(s) 165, 846, 1075
BstMWI GCNNNNNNNGC 7 cut(s) 149, 516, 631, 653, 674, 819, 990
BstNI CCWGG 4 cut(s) 314, 643, 673, 969
BstNSI RCATGY 2 cut(s) 83, 228
BstSCI CCNGG 6 cut(s) 312, 641, 671, 727, 769, 967
BstSFI CTRYAG 1 cut(s) 72
BstSLI GKGCMC 1 cut(s) 11
BstV1I GCAGC 2 cut(s) 800, 1024
BstV2I GAAGAC 1 cut(s) 955
BstX2I RGATCY 2 cut(s) 165, 846
BstXI CCANNNNNNTGG 2 cut(s) 349, 376
BstYI RGATCY 2 cut(s) 165, 846
BsuRI GGCC 7 cut(s) 460, 641, 677, 713, 735, 926, 1016
BtgI CCRYGG 2 cut(s) 213, 264
BtgZI GCGATG 1 cut(s) 158
BtsCI GGATG 3 cut(s) 242, 710, 714
BtsI GCAGTG 3 cut(s) 11, 21, 565
BtsIMutI CAGTG 3 cut(s) 11, 21, 565
Cac8I GCNNGC 4 cut(s) 150, 604, 737, 741
CfoI GCGC 2 cut(s) 572, 649
Cfr13I GGNCC 3 cut(s) 459, 675, 808
CseI GACGC 3 cut(s) 218, 895, 938
Csp6I GTAC 2 cut(s) 228, 840
CviAII CATG 8 cut(s) 80, 206, 214, 225, 265, 590, 796, 805
CviQI GTAC 2 cut(s) 228, 840
DdeI CTNAG 3 cut(s) 455, 474, 843
DpnI GATC 3 cut(s) 167, 848, 1077
DpnII GATC 3 cut(s) 165, 846, 1075
EaeI YGGCCR 2 cut(s) 711, 733
EciI GGCGGA 1 cut(s) 575
Ecl136II GAGCTC 1 cut(s) 802
Eco130I CCWWGG 5 cut(s) 213, 264, 616, 867, 1066
Eco24I GRGCYC 1 cut(s) 804
Eco47I GGWCC 1 cut(s) 808
Eco53kI GAGCTC 1 cut(s) 802
Eco57I CTGAAG 1 cut(s) 704
Eco88I CYCGRG 1 cut(s) 428
EcoICRI GAGCTC 1 cut(s) 802
EcoRI GAATTC 1 cut(s) 409
EcoRII CCWGG 4 cut(s) 312, 641, 671, 967
EcoT14I CCWWGG 5 cut(s) 213, 264, 616, 867, 1066
EcoT38I GRGCYC 1 cut(s) 804
ErhI CCWWGG 5 cut(s) 213, 264, 616, 867, 1066
Esp3I CGTCTC 1 cut(s) 329
FaeI CATG 8 cut(s) 83, 209, 217, 228, 268, 593, 799, 808
FalI AAGNNNNNCTT 2 cut(s) 977, 1009
FatI CATG 8 cut(s) 79, 205, 213, 224, 264, 589, 795, 804
FblI GTMKAC 3 cut(s) 479, 884, 900
Fnu4HI GCNGC 8 cut(s) 511, 514, 517, 669, 733, 744, 814, 1038
FokI GGATG 3 cut(s) 249, 717, 721
FriOI GRGCYC 1 cut(s) 804
Fsp4HI GCNGC 8 cut(s) 511, 514, 517, 669, 733, 744, 814, 1038
FspBI CTAG 1 cut(s) 321
GlaI GCGC 2 cut(s) 571, 648
GluI GCNGC 8 cut(s) 511, 514, 517, 669, 733, 744, 814, 1038
GsuI CTGGAG 1 cut(s) 838
HaeIII GGCC 7 cut(s) 460, 641, 677, 713, 735, 926, 1016
HapII CCGG 4 cut(s) 332, 729, 770, 832
HgaI GACGC 3 cut(s) 218, 895, 938
HhaI GCGC 2 cut(s) 572, 649
Hin1I GRCGYC 4 cut(s) 210, 338, 756, 887
Hin1II CATG 8 cut(s) 83, 209, 217, 228, 268, 593, 799, 808
Hin6I GCGC 2 cut(s) 570, 647
HinP1I GCGC 2 cut(s) 570, 647
HincII GTYRAC 1 cut(s) 885
HindII GTYRAC 1 cut(s) 885
HindIII AAGCTT 2 cut(s) 490, 604
HinfI GANTC 5 cut(s) 54, 126, 328, 787, 952
HpaII CCGG 4 cut(s) 332, 729, 770, 832
HphI GGTGA 3 cut(s) 670, 844, 1085
Hpy166II GTNNAC 4 cut(s) 9, 480, 885, 901
Hpy188I TCNGA 4 cut(s) 439, 754, 846, 1080
Hpy188III TCNNGA 5 cut(s) 332, 760, 779, 949, 1051
Hpy8I GTNNAC 4 cut(s) 9, 480, 885, 901
Hpy99I CGWCG 4 cut(s) 886, 889, 932, 1034
HpyAV CCTTC 3 cut(s) 86, 592, 776
HpyCH4III ACNGT 3 cut(s) 391, 862, 919
HpyCH4IV ACGT 2 cut(s) 338, 756
HpyCH4V TGCA 6 cut(s) 4, 9, 74, 174, 602, 625
HpyF10VI GCNNNNNNNGC 7 cut(s) 149, 516, 631, 653, 674, 819, 990
HpyF3I CTNAG 3 cut(s) 455, 474, 843
HpySE526I ACGT 2 cut(s) 338, 756
Hsp92I GRCGYC 4 cut(s) 210, 338, 756, 887
Hsp92II CATG 8 cut(s) 83, 209, 217, 228, 268, 593, 799, 808
HspAI GCGC 2 cut(s) 570, 647
Kpn2I TCCGGA 1 cut(s) 331
Kzo9I GATC 3 cut(s) 165, 846, 1075
LmnI GCTCC 6 cut(s) 365, 507, 799, 819, 1034, 1045
Lsp1109I GCAGC 2 cut(s) 800, 1024
LweI GCATC 2 cut(s) 135, 634
MaeI CTAG 1 cut(s) 321
MaeII ACGT 2 cut(s) 338, 756
MaeIII GTNAC 3 cut(s) 305, 391, 577
MalI GATC 3 cut(s) 167, 848, 1077
MboI GATC 3 cut(s) 165, 846, 1075
MflI RGATCY 2 cut(s) 165, 846
MhlI GDGCHC 2 cut(s) 11, 804
MlsI TGGCCA 1 cut(s) 713
MluCI AATT 3 cut(s) 409, 597, 690
MluNI TGGCCA 1 cut(s) 713
MmeI TCCRAC 2 cut(s) 143, 485
Mox20I TGGCCA 1 cut(s) 713
MroI TCCGGA 1 cut(s) 331
MroXI GAANNNNTTC 1 cut(s) 786
MscI TGGCCA 1 cut(s) 713
MseI TTAA 4 cut(s) 29, 188, 242, 894
MslI CAYNNNNRTG 1 cut(s) 656
Msp20I TGGCCA 1 cut(s) 713
MspA1I CMGCKG 1 cut(s) 813
MspI CCGG 4 cut(s) 332, 729, 770, 832
MspR9I CCNGG 6 cut(s) 314, 643, 673, 729, 771, 969
MvaI CCWGG 4 cut(s) 314, 643, 673, 969
MwoI GCNNNNNNNGC 7 cut(s) 149, 516, 631, 653, 674, 819, 990
NciI CCSGG 2 cut(s) 729, 771
NcoI CCATGG 2 cut(s) 213, 264
NdeII GATC 3 cut(s) 165, 846, 1075
NlaIII CATG 8 cut(s) 83, 209, 217, 228, 268, 593, 799, 808
NlaIV GGNNCC 5 cut(s) 167, 367, 509, 821, 1001
NmeAIII GCCGAG 2 cut(s) 703, 771
NspI RCATGY 2 cut(s) 83, 228
NspV TTCGAA 1 cut(s) 911
OliI CACNNNNGTG 1 cut(s) 656
PciI ACATGT 2 cut(s) 79, 224
PcsI WCGNNNNNNNCGW 1 cut(s) 887
PdmI GAANNNNTTC 1 cut(s) 786
PfeI GAWTC 5 cut(s) 54, 126, 328, 787, 952
PflFI GACNNNGTC 1 cut(s) 932
PflMI CCANNNNNTGG 1 cut(s) 219
PkrI GCNGC 8 cut(s) 512, 515, 518, 670, 734, 745, 815, 1039
PscI ACATGT 2 cut(s) 79, 224
Psp124BI GAGCTC 1 cut(s) 804
Psp6I CCWGG 4 cut(s) 312, 641, 671, 967
PspGI CCWGG 4 cut(s) 312, 641, 671, 967
PspN4I GGNNCC 5 cut(s) 167, 367, 509, 821, 1001
PspPI GGNCC 3 cut(s) 459, 675, 808
PstI CTGCAG 1 cut(s) 76
PsuI RGATCY 2 cut(s) 165, 846
PsyI GACNNNGTC 1 cut(s) 932
RsaI GTAC 2 cut(s) 229, 841
RsaNI GTAC 2 cut(s) 228, 840
RseI CAYNNNNRTG 1 cut(s) 656
SacI GAGCTC 1 cut(s) 804
SalI GTCGAC 1 cut(s) 883
SaqAI TTAA 4 cut(s) 29, 188, 242, 894
SatI GCNGC 8 cut(s) 511, 514, 517, 669, 733, 744, 814, 1038
Sau3AI GATC 3 cut(s) 165, 846, 1075
Sau96I GGNCC 3 cut(s) 459, 675, 808
ScaI AGTACT 1 cut(s) 841
ScrFI CCNGG 6 cut(s) 314, 643, 673, 729, 771, 969
SduI GDGCHC 2 cut(s) 11, 804
SfaNI GCATC 2 cut(s) 135, 634
SfcI CTRYAG 1 cut(s) 72
SfuI TTCGAA 1 cut(s) 911
SgrDI CGTCGACG 1 cut(s) 883
SinI GGWCC 1 cut(s) 808
SmiMI CAYNNNNRTG 1 cut(s) 656
Sse9I AATT 3 cut(s) 409, 597, 690
SspMI CTAG 1 cut(s) 321
SstI GAGCTC 1 cut(s) 804
StyD4I CCNGG 6 cut(s) 312, 641, 671, 727, 769, 967
StyI CCWWGG 5 cut(s) 213, 264, 616, 867, 1066
TaaI ACNGT 3 cut(s) 391, 862, 919
TaiI ACGT 2 cut(s) 341, 759
TaqI TCGA 3 cut(s) 873, 884, 911
TasI AATT 3 cut(s) 409, 597, 690
TatI WGTACW 2 cut(s) 227, 839
TauI GCSGC 6 cut(s) 513, 516, 519, 671, 735, 746
TfiI GAWTC 5 cut(s) 54, 126, 328, 787, 952
Tru1I TTAA 4 cut(s) 29, 188, 242, 894
Tru9I TTAA 4 cut(s) 29, 188, 242, 894
TscAI CASTG 2 cut(s) 28, 572
TseI GCWGC 2 cut(s) 813, 1037
TspDTI ATGAA 3 cut(s) 514, 519, 606
TspGWI ACGGA 1 cut(s) 1047
TspRI CASTG 2 cut(s) 28, 572
Tth111I GACNNNGTC 1 cut(s) 932
Van91I CCANNNNNTGG 1 cut(s) 219
VneI GTGCAC 1 cut(s) 7
VpaK11BI GGWCC 1 cut(s) 808
XapI RAATTY 1 cut(s) 409
XceI RCATGY 2 cut(s) 83, 228
XmiI GTMKAC 3 cut(s) 479, 884, 900
XmnI GAANNNNTTC 1 cut(s) 786
XspI CTAG 1 cut(s) 321
ZraI GACGTC 2 cut(s) 339, 757
ZrmI AGTACT 1 cut(s) 841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.