RchiOBHm_Chr2g0119281

Phosphatidylinositol 4-kinase gamma

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Forward (+)
31598838 .. 31599156
319 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 186 bp
ATGCATTTGGTTCTTAGGCTGTCTGATCTTCAGGAGATTAATGTTCGAACTAATTGTGGGAAAGAGTTTACGTTCCATGTGGAGCGTGGGAAAGATGTTGGGTATGTAAAGCAGAAGATTGCGAAGAATAGTAAAGAGTTTGTTGATCTAGAGGAGCAAGAAGTTGTGTTGGATGGGAAGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

61

Amino Acids

7.12

Weight (kDa)

6.72

Isoelectric Point (pI)

41.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ubiquitin PF00240 13 - 61 8.3e-06 Ubiquitin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 181
AcuI CTGAAG 1 cut(s) 14
AseI ATTAAT 1 cut(s) 39
AsuII TTCGAA 1 cut(s) 46
BccI CCATC 1 cut(s) 167
BfaI CTAG 1 cut(s) 149
Bpu14I TTCGAA 1 cut(s) 46
BseGI GGATG 1 cut(s) 178
BseRI GAGGAG 1 cut(s) 167
Bsp119I TTCGAA 1 cut(s) 46
Bsp143I GATC 2 cut(s) 25, 145
BspACI CCGC 1 cut(s) 181
BspT104I TTCGAA 1 cut(s) 46
BssMI GATC 2 cut(s) 25, 145
BstBI TTCGAA 1 cut(s) 46
BstDEI CTNAG 1 cut(s) 14
BstF5I GGATG 1 cut(s) 178
BstKTI GATC 2 cut(s) 28, 148
BstMBI GATC 2 cut(s) 25, 145
BtsCI GGATG 1 cut(s) 178
CviAII CATG 1 cut(s) 77
CviJI RGCY 1 cut(s) 19
CviKI_1 RGCY 1 cut(s) 19
DdeI CTNAG 1 cut(s) 14
DpnI GATC 2 cut(s) 27, 147
DpnII GATC 2 cut(s) 25, 145
Eco57I CTGAAG 1 cut(s) 14
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 1 cut(s) 80
FaiI YATR 2 cut(s) 78, 105
FatI CATG 1 cut(s) 76
FspBI CTAG 1 cut(s) 149
Hin1II CATG 1 cut(s) 80
Hpy166II GTNNAC 1 cut(s) 69
Hpy188I TCNGA 1 cut(s) 25
Hpy188III TCNNGA 2 cut(s) 32, 149
Hpy8I GTNNAC 1 cut(s) 69
HpyCH4IV ACGT 1 cut(s) 71
HpyCH4V TGCA 1 cut(s) 4
HpyF3I CTNAG 1 cut(s) 14
HpySE526I ACGT 1 cut(s) 71
Hsp92II CATG 1 cut(s) 80
Kzo9I GATC 2 cut(s) 25, 145
LmnI GCTCC 2 cut(s) 82, 154
LpnPI CCDG 1 cut(s) 17
MaeI CTAG 1 cut(s) 149
MaeII ACGT 1 cut(s) 71
MalI GATC 2 cut(s) 27, 147
MboI GATC 2 cut(s) 25, 145
MboII GAAGA 3 cut(s) 20, 127, 136
MluCI AATT 1 cut(s) 52
MmeI TCCRAC 1 cut(s) 150
MnlI CCTC 1 cut(s) 145
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 1 cut(s) 39
NdeII GATC 2 cut(s) 25, 145
NlaIII CATG 1 cut(s) 80
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 46
PshBI ATTAAT 1 cut(s) 39
SaqAI TTAA 1 cut(s) 39
Sau3AI GATC 2 cut(s) 25, 145
SetI ASST 1 cut(s) 74
SfuI TTCGAA 1 cut(s) 46
SgeI CNNG 5 cut(s) 44, 89, 98, 161, 170
Sse9I AATT 1 cut(s) 52
SsiI CCGC 1 cut(s) 181
SspMI CTAG 1 cut(s) 149
TaiI ACGT 1 cut(s) 74
TaqI TCGA 1 cut(s) 46
TasI AATT 1 cut(s) 52
Tru1I TTAA 1 cut(s) 39
Tru9I TTAA 1 cut(s) 39
VspI ATTAAT 1 cut(s) 39
XbaI TCTAGA 1 cut(s) 148
XcmI CCANNNNNNNNNTGG 1 cut(s) 83
XspI CTAG 1 cut(s) 149
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.