RchiOBHm_Chr2g0121711

SAL1 phosphatase-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Forward (+)
34640925 .. 34641315
391 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 252 bp
ATGGCTATAAATTGCTTGAGAGCAATACCCAAAATTCCGCATTCTTCAAACCCCAAAATCACCAGCTCATTCTCCAACTCTTTCCTTTTCTCTTCCAACTCCAAACCCAAAAGGGTCTTTTCATCAATTCGAGCTTCAATGTCTTACGAGAAGGAGCTCGCTGCTGCCAAGAAAGCTGCCTCCGTCGCCGCTCGCCTCTGCCAGGCATTACTCTCTCTTTCTCTCTTCCAACCTTTTTTGCTTCGAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

83

Amino Acids

9.09

Weight (kDa)

10.74

Isoelectric Point (pI)

36.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 191
AciI CCGC 2 cut(s) 38, 189
AcsI RAATTY 1 cut(s) 33
AfiI CCNNNNNNNGG 1 cut(s) 202
AgsI TTSAA 2 cut(s) 48, 138
AjnI CCWGG 1 cut(s) 201
AluBI AGCT 4 cut(s) 66, 134, 157, 176
AluI AGCT 4 cut(s) 66, 134, 157, 176
Alw21I GWGCWC 1 cut(s) 159
ApeKI GCWGC 3 cut(s) 161, 164, 176
ApoI RAATTY 1 cut(s) 33
AsuHPI GGTGA 1 cut(s) 52
AsuII TTCGAA 1 cut(s) 244
BanII GRGCYC 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 159
BbvI GCAGC 3 cut(s) 148, 151, 163
BciT130I CCWGG 1 cut(s) 203
BisI GCNGC 4 cut(s) 162, 165, 177, 189
BlsI GCNGC 4 cut(s) 163, 166, 178, 190
Bme1390I CCNGG 1 cut(s) 203
BmrFI CCNGG 1 cut(s) 203
Bpu14I TTCGAA 1 cut(s) 244
BpuEI CTTGAG 1 cut(s) 37
Bsc4I CCNNNNNNNGG 1 cut(s) 202
BseBI CCWGG 1 cut(s) 203
BseLI CCNNNNNNNGG 1 cut(s) 202
BseXI GCAGC 3 cut(s) 148, 151, 163
BsiHKAI GWGCWC 1 cut(s) 159
BslI CCNNNNNNNGG 1 cut(s) 202
BsmI GAATGC 1 cut(s) 40
Bsp119I TTCGAA 1 cut(s) 244
Bsp1286I GDGCHC 1 cut(s) 159
BspACI CCGC 2 cut(s) 38, 189
BspT104I TTCGAA 1 cut(s) 244
BsrBI CCGCTC 1 cut(s) 191
Bst2UI CCWGG 1 cut(s) 203
Bst6I CTCTTC 2 cut(s) 97, 230
BstBI TTCGAA 1 cut(s) 244
BstC8I GCNNGC 2 cut(s) 159, 193
BstENI CCTNNNNNAGG 1 cut(s) 200
BstMWI GCNNNNNNNGC 2 cut(s) 173, 185
BstNI CCWGG 1 cut(s) 203
BstSCI CCNGG 1 cut(s) 201
BstV1I GCAGC 3 cut(s) 148, 151, 163
Cac8I GCNNGC 2 cut(s) 159, 193
CviJI RGCY 5 cut(s) 5, 66, 134, 157, 176
CviKI_1 RGCY 5 cut(s) 5, 66, 134, 157, 176
Eam1104I CTCTTC 2 cut(s) 97, 230
EarI CTCTTC 2 cut(s) 97, 230
Ecl136II GAGCTC 1 cut(s) 157
Eco24I GRGCYC 1 cut(s) 159
Eco53kI GAGCTC 1 cut(s) 157
EcoICRI GAGCTC 1 cut(s) 157
EcoNI CCTNNNNNAGG 1 cut(s) 200
EcoRII CCWGG 1 cut(s) 201
EcoT38I GRGCYC 1 cut(s) 159
FaiI YATR 1 cut(s) 8
Fnu4HI GCNGC 4 cut(s) 162, 165, 177, 189
FriOI GRGCYC 1 cut(s) 159
Fsp4HI GCNGC 4 cut(s) 162, 165, 177, 189
GluI GCNGC 4 cut(s) 162, 165, 177, 189
HphI GGTGA 1 cut(s) 52
Hpy99I CGWCG 1 cut(s) 188
HpyAV CCTTC 1 cut(s) 145
HpyF10VI GCNNNNNNNGC 2 cut(s) 173, 185
LmnI GCTCC 1 cut(s) 154
LpnPI CCDG 3 cut(s) 76, 188, 215
Lsp1109I GCAGC 3 cut(s) 148, 151, 163
MbiI CCGCTC 1 cut(s) 191
MboII GAAGA 3 cut(s) 36, 84, 217
MhlI GDGCHC 1 cut(s) 159
MluCI AATT 4 cut(s) 10, 33, 126, 247
MmeI TCCRAC 2 cut(s) 99, 120
MnlI CCTC 2 cut(s) 190, 206
MspR9I CCNGG 1 cut(s) 203
Mva1269I GAATGC 1 cut(s) 40
MvaI CCWGG 1 cut(s) 203
MwoI GCNNNNNNNGC 2 cut(s) 173, 185
NspV TTCGAA 1 cut(s) 244
PctI GAATGC 1 cut(s) 40
PkrI GCNGC 4 cut(s) 163, 166, 178, 190
Psp124BI GAGCTC 1 cut(s) 159
Psp6I CCWGG 1 cut(s) 201
PspGI CCWGG 1 cut(s) 201
SacI GAGCTC 1 cut(s) 159
SatI GCNGC 4 cut(s) 162, 165, 177, 189
ScrFI CCNGG 1 cut(s) 203
SduI GDGCHC 1 cut(s) 159
SetI ASST 5 cut(s) 68, 136, 159, 178, 235
SfuI TTCGAA 1 cut(s) 244
SgeI CNNG 9 cut(s) 28, 75, 143, 160, 170, 181, 204, 214, 215
SmlI CTYRAG 1 cut(s) 16
SmoI CTYRAG 1 cut(s) 16
Sse9I AATT 4 cut(s) 10, 33, 126, 247
SsiI CCGC 2 cut(s) 38, 189
SstI GAGCTC 1 cut(s) 159
StyD4I CCNGG 1 cut(s) 201
TaqI TCGA 2 cut(s) 130, 244
TasI AATT 4 cut(s) 10, 33, 126, 247
TauI GCSGC 1 cut(s) 191
TseI GCWGC 3 cut(s) 161, 164, 176
TspDTI ATGAA 1 cut(s) 111
TspGWI ACGGA 1 cut(s) 172
XagI CCTNNNNNAGG 1 cut(s) 200
XapI RAATTY 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.