RchiOBHm_Chr2g0130591

Sucrose-6-phosphate phosphohydrolase C-terminal

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Forward (+)
46677218 .. 46679590
2373 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 213 bp
ATGGATAGAAGAGCATTTGGACTAGCAGATGACATATGTGCAGCTGGGATCTTACAAGCCATTGGTAATTTTCATTTTGGTCCAAATGTATCGCCAAGAGATATCAAAGACTTCCAAAAGTGCAAAGTGAACATTTTCAGTCTCGCTTATGAAGTAGTAAAATTCTATCTGTTTTATGGGAAAGCAGCAGCTAAAAGCTGTGGAGGCCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

70

Amino Acids

7.7

Weight (kDa)

8.91

Isoelectric Point (pI)

36.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 56
AcsI RAATTY 1 cut(s) 161
AluBI AGCT 3 cut(s) 44, 191, 198
AluI AGCT 3 cut(s) 44, 191, 198
Alw26I GTCTC 1 cut(s) 146
AlwI GGATC 1 cut(s) 56
AoxI GGCC 1 cut(s) 205
ApeKI GCWGC 3 cut(s) 41, 185, 188
ApoI RAATTY 1 cut(s) 161
Asp700I GAANNNNTTC 1 cut(s) 134
AspS9I GGNCC 1 cut(s) 80
AvaII GGWCC 1 cut(s) 80
BbvI GCAGC 3 cut(s) 53, 197, 200
BcoDI GTCTC 1 cut(s) 146
BfaI CTAG 1 cut(s) 23
BisI GCNGC 3 cut(s) 42, 186, 189
BlsI GCNGC 3 cut(s) 43, 187, 190
Bme18I GGWCC 1 cut(s) 80
BmgT120I GGNCC 1 cut(s) 80
BseXI GCAGC 3 cut(s) 53, 197, 200
BseYI CCCAGC 1 cut(s) 44
BsgI GTGCAG 1 cut(s) 60
BshFI GGCC 1 cut(s) 207
BsmAI GTCTC 1 cut(s) 146
BsnI GGCC 1 cut(s) 207
Bsp143I GATC 1 cut(s) 48
BspANI GGCC 1 cut(s) 207
BspPI GGATC 1 cut(s) 56
BspQI GCTCTTC 1 cut(s) 4
BssMI GATC 1 cut(s) 48
Bst6I CTCTTC 1 cut(s) 4
BstKTI GATC 1 cut(s) 51
BstMAI GTCTC 1 cut(s) 146
BstMBI GATC 1 cut(s) 48
BstMWI GCNNNNNNNGC 1 cut(s) 204
BstV1I GCAGC 3 cut(s) 53, 197, 200
BstX2I RGATCY 1 cut(s) 48
BstYI RGATCY 1 cut(s) 48
BsuRI GGCC 1 cut(s) 207
Cfr13I GGNCC 1 cut(s) 80
CviJI RGCY 5 cut(s) 44, 59, 191, 198, 207
CviKI_1 RGCY 5 cut(s) 44, 59, 191, 198, 207
DpnI GATC 1 cut(s) 50
DpnII GATC 1 cut(s) 48
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
Eco32I GATATC 1 cut(s) 103
Eco47I GGWCC 1 cut(s) 80
EcoRV GATATC 1 cut(s) 103
FaiI YATR 4 cut(s) 35, 37, 150, 177
FauNDI CATATG 1 cut(s) 35
Fnu4HI GCNGC 3 cut(s) 42, 186, 189
Fsp4HI GCNGC 3 cut(s) 42, 186, 189
FspBI CTAG 1 cut(s) 23
GluI GCNGC 3 cut(s) 42, 186, 189
GsaI CCCAGC 1 cut(s) 48
HaeIII GGCC 1 cut(s) 207
Hpy166II GTNNAC 1 cut(s) 130
Hpy8I GTNNAC 1 cut(s) 130
HpyCH4V TGCA 2 cut(s) 41, 123
HpyF10VI GCNNNNNNNGC 1 cut(s) 204
Kzo9I GATC 1 cut(s) 48
LguI GCTCTTC 1 cut(s) 4
LpnPI CCDG 1 cut(s) 30
Lsp1109I GCAGC 3 cut(s) 53, 197, 200
MaeI CTAG 1 cut(s) 23
MalI GATC 1 cut(s) 50
MboI GATC 1 cut(s) 48
MboII GAAGA 1 cut(s) 21
MflI RGATCY 1 cut(s) 48
MluCI AATT 2 cut(s) 67, 161
MnlI CCTC 1 cut(s) 197
MroXI GAANNNNTTC 1 cut(s) 134
MseI TTAA 1 cut(s) 211
MspA1I CMGCKG 1 cut(s) 44
MwoI GCNNNNNNNGC 1 cut(s) 204
NdeI CATATG 1 cut(s) 35
NdeII GATC 1 cut(s) 48
PciSI GCTCTTC 1 cut(s) 4
PdmI GAANNNNTTC 1 cut(s) 134
PkrI GCNGC 3 cut(s) 43, 187, 190
PspFI CCCAGC 1 cut(s) 44
PspPI GGNCC 1 cut(s) 80
PsuI RGATCY 1 cut(s) 48
PvuII CAGCTG 1 cut(s) 44
SapI GCTCTTC 1 cut(s) 4
SaqAI TTAA 1 cut(s) 211
SatI GCNGC 3 cut(s) 42, 186, 189
Sau3AI GATC 1 cut(s) 48
Sau96I GGNCC 1 cut(s) 80
SetI ASST 3 cut(s) 46, 193, 200
SgeI CNNG 5 cut(s) 35, 57, 68, 108, 155
SinI GGWCC 1 cut(s) 80
Sse9I AATT 2 cut(s) 67, 161
SspMI CTAG 1 cut(s) 23
TasI AATT 2 cut(s) 67, 161
Tru1I TTAA 1 cut(s) 211
Tru9I TTAA 1 cut(s) 211
TseI GCWGC 3 cut(s) 41, 185, 188
TspDTI ATGAA 2 cut(s) 62, 165
VpaK11BI GGWCC 1 cut(s) 80
XapI RAATTY 1 cut(s) 161
XmnI GAANNNNTTC 1 cut(s) 134
XspI CTAG 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.