RchiOBHm_Chr2g0131251

response to heat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Reverse (-)
47371344 .. 47373570
2227 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 186 bp
ATGCGGTATTTTAATAGAATTGTAATTGGATTTCTTGCATATGGATGTGGTTTTGATCTTTGTTCTCTCACTCCATTTGCAGCTATGGAGCATGGGGTTCTCAATGTGACTGTTCCTAAGGCAAAGGTGAAGATGCCTGATGTCAAACCCATTGAAATCTGGGTTTTGTTCTTTACCTTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

61

Amino Acids

6.91

Weight (kDa)

8.74

Isoelectric Point (pI)

27.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 4
AgsI TTSAA 1 cut(s) 155
AluBI AGCT 1 cut(s) 83
AluI AGCT 1 cut(s) 83
ApeKI GCWGC 1 cut(s) 80
AsuHPI GGTGA 1 cut(s) 139
AxyI CCTNAGG 1 cut(s) 117
BbvI GCAGC 1 cut(s) 92
BisI GCNGC 1 cut(s) 81
BlsI GCNGC 1 cut(s) 82
BmsI GCATC 1 cut(s) 123
Bse21I CCTNAGG 1 cut(s) 117
BseGI GGATG 1 cut(s) 50
BseXI GCAGC 1 cut(s) 92
Bsp143I GATC 1 cut(s) 55
BspACI CCGC 1 cut(s) 4
BssMI GATC 1 cut(s) 55
Bst4CI ACNGT 1 cut(s) 112
BstDEI CTNAG 1 cut(s) 117
BstF5I GGATG 1 cut(s) 50
BstKTI GATC 1 cut(s) 58
BstMBI GATC 1 cut(s) 55
BstV1I GCAGC 1 cut(s) 92
Bsu36I CCTNAGG 1 cut(s) 117
BtsCI GGATG 1 cut(s) 50
CviAII CATG 1 cut(s) 92
CviJI RGCY 1 cut(s) 83
CviKI_1 RGCY 1 cut(s) 83
DdeI CTNAG 1 cut(s) 117
DpnI GATC 1 cut(s) 57
DpnII GATC 1 cut(s) 55
Eco81I CCTNAGG 1 cut(s) 117
FaeI CATG 1 cut(s) 95
FaiI YATR 4 cut(s) 40, 42, 86, 93
FatI CATG 1 cut(s) 91
FauNDI CATATG 1 cut(s) 40
Fnu4HI GCNGC 1 cut(s) 81
FokI GGATG 1 cut(s) 57
Fsp4HI GCNGC 1 cut(s) 81
GluI GCNGC 1 cut(s) 81
Hin1II CATG 1 cut(s) 95
HphI GGTGA 1 cut(s) 139
HpyCH4III ACNGT 1 cut(s) 112
HpyCH4V TGCA 2 cut(s) 38, 80
HpyF3I CTNAG 1 cut(s) 117
Hsp92II CATG 1 cut(s) 95
Kzo9I GATC 1 cut(s) 55
LmnI GCTCC 1 cut(s) 88
LpnPI CCDG 2 cut(s) 145, 150
Lsp1109I GCAGC 1 cut(s) 92
LweI GCATC 1 cut(s) 123
MaeIII GTNAC 1 cut(s) 106
MalI GATC 1 cut(s) 57
MboI GATC 1 cut(s) 55
MboII GAAGA 1 cut(s) 142
MluCI AATT 2 cut(s) 18, 24
MseI TTAA 1 cut(s) 12
MslI CAYNNNNRTG 1 cut(s) 43
NdeI CATATG 1 cut(s) 40
NdeII GATC 1 cut(s) 55
NlaIII CATG 1 cut(s) 95
NmuCI GTSAC 1 cut(s) 106
PkrI GCNGC 1 cut(s) 82
RseI CAYNNNNRTG 1 cut(s) 43
SaqAI TTAA 1 cut(s) 12
SatI GCNGC 1 cut(s) 81
Sau3AI GATC 1 cut(s) 55
SetI ASST 3 cut(s) 85, 129, 179
SfaNI GCATC 1 cut(s) 123
SgeI CNNG 4 cut(s) 47, 104, 149, 172
SmiMI CAYNNNNRTG 1 cut(s) 43
Sse9I AATT 2 cut(s) 18, 24
SsiI CCGC 1 cut(s) 4
TaaI ACNGT 1 cut(s) 112
TasI AATT 2 cut(s) 18, 24
Tru1I TTAA 1 cut(s) 12
Tru9I TTAA 1 cut(s) 12
TseFI GTSAC 1 cut(s) 106
TseI GCWGC 1 cut(s) 80
Tsp45I GTSAC 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.