RchiOBHm_Chr2g0131291

sugar phosphate phosphate translocator

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
47414821 .. 47416283
1463 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 225 bp
ATGACATGCTGTTCATCCCTGCGCAAATTTTTGTTGATGGCTGATTTGTTGCGTGCTTTATGCGTCTATGTATTTGGATTTGAAGAGATACTGATTGGTTTATGCATTTGTCAGGTTGCGGTCATTTACTTCCATGATGAATTTACTATGTTAAAAGGAGTTGGACTCTTCACAATTATTCTTGGTGTGAGTTTATTCAACTGGTACATAACTCTAAATCATTAG

Protein Analysis

74

Amino Acids

8.47

Weight (kDa)

5.99

Isoelectric Point (pI)

21.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029837)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0131291
rosa_rugosa Rorug02G0295800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 23
AciI CCGC 1 cut(s) 119
AcsI RAATTY 2 cut(s) 26, 140
AfaI GTAC 1 cut(s) 206
AgsI TTSAA 2 cut(s) 83, 199
ApoI RAATTY 2 cut(s) 26, 140
AspLEI GCGC 1 cut(s) 24
BccI CCATC 1 cut(s) 31
BplI GAGNNNNNCTC 2 cut(s) 150, 182
Bse1I ACTGG 1 cut(s) 206
BseGI GGATG 1 cut(s) 14
BseNI ACTGG 1 cut(s) 206
BspACI CCGC 1 cut(s) 119
BsrI ACTGG 1 cut(s) 206
Bst6I CTCTTC 2 cut(s) 78, 173
BstC8I GCNNGC 1 cut(s) 54
BstF5I GGATG 1 cut(s) 14
BstHHI GCGC 1 cut(s) 24
BstNSI RCATGY 1 cut(s) 9
BtsCI GGATG 1 cut(s) 14
Cac8I GCNNGC 1 cut(s) 54
CfoI GCGC 1 cut(s) 24
CseI GACGC 1 cut(s) 52
Csp6I GTAC 1 cut(s) 205
CviAII CATG 2 cut(s) 6, 134
CviJI RGCY 1 cut(s) 41
CviKI_1 RGCY 1 cut(s) 41
CviQI GTAC 1 cut(s) 205
Eam1104I CTCTTC 2 cut(s) 78, 173
EarI CTCTTC 2 cut(s) 78, 173
EcoT22I ATGCAT 1 cut(s) 107
FaeI CATG 2 cut(s) 9, 137
FaiI YATR 7 cut(s) 7, 61, 69, 103, 135, 149, 209
FatI CATG 2 cut(s) 5, 133
FspI TGCGCA 1 cut(s) 23
GlaI GCGC 1 cut(s) 23
HgaI GACGC 1 cut(s) 52
HhaI GCGC 1 cut(s) 24
Hin1II CATG 2 cut(s) 9, 137
Hin6I GCGC 1 cut(s) 22
HinP1I GCGC 1 cut(s) 22
HinfI GANTC 1 cut(s) 165
HpyCH4V TGCA 1 cut(s) 105
Hsp92II CATG 2 cut(s) 9, 137
HspAI GCGC 1 cut(s) 22
LpnPI CCDG 3 cut(s) 32, 98, 187
MboII GAAGA 2 cut(s) 95, 160
MluCI AATT 3 cut(s) 26, 140, 174
MlyI GAGTC 1 cut(s) 159
MmeI TCCRAC 1 cut(s) 142
Mph1103I ATGCAT 1 cut(s) 107
MseI TTAA 1 cut(s) 152
NlaIII CATG 2 cut(s) 9, 137
NsbI TGCGCA 1 cut(s) 23
NsiI ATGCAT 1 cut(s) 107
NspI RCATGY 1 cut(s) 9
PleI GAGTC 1 cut(s) 159
PpsI GAGTC 1 cut(s) 159
RsaI GTAC 1 cut(s) 206
RsaNI GTAC 1 cut(s) 205
SaqAI TTAA 1 cut(s) 152
SchI GAGTC 1 cut(s) 159
SetI ASST 1 cut(s) 117
SgeI CNNG 7 cut(s) 18, 31, 65, 125, 146, 194, 214
Sse9I AATT 3 cut(s) 26, 140, 174
SsiI CCGC 1 cut(s) 119
TasI AATT 3 cut(s) 26, 140, 174
Tru1I TTAA 1 cut(s) 152
Tru9I TTAA 1 cut(s) 152
TspDTI ATGAA 1 cut(s) 153
XapI RAATTY 2 cut(s) 26, 140
XceI RCATGY 1 cut(s) 9
Zsp2I ATGCAT 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.