RchiOBHm_Chr2g0132831

Belongs to the protein-tyrosine phosphatase family. Non-receptor class myotubularin subfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Forward (+)
49419913 .. 49423702
3790 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 306 bp
ATGATAGAATGCTGCAATTCCTTTGGTTTCTCTATTGCTAGAGAGCTTAAACTGAAAATCAAGCCCAGTTATAACTATTTCGTTGCTACTCAACGCGCCGTTTCGCATTTGAAGTTGGATTGCTTGCTTGAAGGTGAGCAAGTTGAAGTTGAGGGATATGGCGTTGCTCTTATTAATACTGACGAGGCAGGTACCTTGATAGTCACCAATTTTCGGCTTCTTTTTCTGAGTGAGGAACTAGAAATGTTATTCCACTTGGCACAATACCTTTGGCAACAATTGAGAAGTTCAACAAAATGGTTGTAA

Protein Analysis

101

Amino Acids

11.66

Weight (kDa)

5.3

Isoelectric Point (pI)

25.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 72
Acc36I ACCTGC 1 cut(s) 179
Acc65I GGTACC 1 cut(s) 191
AccB1I GGYRCC 1 cut(s) 191
AccII CGCG 1 cut(s) 96
AfaI GTAC 1 cut(s) 193
AfiI CCNNNNNNNGG 1 cut(s) 213
AgsI TTSAA 4 cut(s) 112, 131, 146, 291
AluBI AGCT 1 cut(s) 46
AluI AGCT 1 cut(s) 46
ApeKI GCWGC 1 cut(s) 12
AseI ATTAAT 1 cut(s) 174
Asp718I GGTACC 1 cut(s) 191
AspLEI GCGC 1 cut(s) 98
AsuHPI GGTGA 2 cut(s) 146, 196
BanI GGYRCC 1 cut(s) 191
BceAI ACGGC 1 cut(s) 83
BfaI CTAG 2 cut(s) 39, 239
BfuAI ACCTGC 1 cut(s) 179
BisI GCNGC 1 cut(s) 13
BlsI GCNGC 1 cut(s) 14
BmiI GGNNCC 1 cut(s) 193
BmrI ACTGGG 1 cut(s) 60
BmuI ACTGGG 1 cut(s) 60
Bsc4I CCNNNNNNNGG 1 cut(s) 213
Bse1I ACTGG 1 cut(s) 66
BseLI CCNNNNNNNGG 1 cut(s) 213
BseMII CTCAG 1 cut(s) 218
BseNI ACTGG 1 cut(s) 66
Bsh1236I CGCG 1 cut(s) 96
BshNI GGYRCC 1 cut(s) 191
BslI CCNNNNNNNGG 1 cut(s) 213
BsmI GAATGC 1 cut(s) 14
BspCNI CTCAG 1 cut(s) 219
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 1 cut(s) 193
BspMI ACCTGC 1 cut(s) 179
BspT107I GGYRCC 1 cut(s) 191
BsrI ACTGG 1 cut(s) 66
BstC8I GCNNGC 1 cut(s) 125
BstDEI CTNAG 1 cut(s) 227
BstFNI CGCG 1 cut(s) 96
BstHHI GCGC 1 cut(s) 98
BstUI CGCG 1 cut(s) 96
BveI ACCTGC 1 cut(s) 179
Cac8I GCNNGC 1 cut(s) 125
CfoI GCGC 1 cut(s) 98
Csp6I GTAC 1 cut(s) 192
CviJI RGCY 3 cut(s) 46, 64, 217
CviKI_1 RGCY 3 cut(s) 46, 64, 217
CviQI GTAC 1 cut(s) 192
DdeI CTNAG 1 cut(s) 227
FaiI YATR 2 cut(s) 72, 159
Fnu4HI GCNGC 1 cut(s) 13
Fsp4HI GCNGC 1 cut(s) 13
FspBI CTAG 2 cut(s) 39, 239
GlaI GCGC 1 cut(s) 97
GluI GCNGC 1 cut(s) 13
HhaI GCGC 1 cut(s) 98
Hin6I GCGC 1 cut(s) 96
HinP1I GCGC 1 cut(s) 96
HphI GGTGA 2 cut(s) 146, 196
Hpy188I TCNGA 1 cut(s) 228
HpyAV CCTTC 1 cut(s) 125
HpyCH4V TGCA 1 cut(s) 15
HpyF3I CTNAG 1 cut(s) 227
HspAI GCGC 1 cut(s) 96
KpnI GGTACC 1 cut(s) 195
LpnPI CCDG 2 cut(s) 79, 174
MaeI CTAG 2 cut(s) 39, 239
MaeIII GTNAC 1 cut(s) 202
MfeI CAATTG 1 cut(s) 278
MluCI AATT 3 cut(s) 16, 208, 278
MmeI TCCRAC 1 cut(s) 96
MnlI CCTC 3 cut(s) 145, 178, 226
MseI TTAA 2 cut(s) 48, 174
MunI CAATTG 1 cut(s) 278
Mva1269I GAATGC 1 cut(s) 14
MvnI CGCG 1 cut(s) 96
NlaIV GGNNCC 1 cut(s) 193
NmuCI GTSAC 1 cut(s) 202
PctI GAATGC 1 cut(s) 14
PkrI GCNGC 1 cut(s) 14
PshBI ATTAAT 1 cut(s) 174
PsiI TTATAA 1 cut(s) 72
PspN4I GGNNCC 1 cut(s) 193
RsaI GTAC 1 cut(s) 193
RsaNI GTAC 1 cut(s) 192
SaqAI TTAA 2 cut(s) 48, 174
SatI GCNGC 1 cut(s) 13
SetI ASST 5 cut(s) 48, 136, 193, 197, 270
Sse9I AATT 3 cut(s) 16, 208, 278
SspMI CTAG 2 cut(s) 39, 239
TasI AATT 3 cut(s) 16, 208, 278
Tru1I TTAA 2 cut(s) 48, 174
Tru9I TTAA 2 cut(s) 48, 174
TseFI GTSAC 1 cut(s) 202
TseI GCWGC 1 cut(s) 12
Tsp45I GTSAC 1 cut(s) 202
VspI ATTAAT 1 cut(s) 174
XspI CTAG 2 cut(s) 39, 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.