RchiOBHm_Chr2g0145701

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Reverse (-)
63453709 .. 63453945
237 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 129 bp
ATGGTTTTTTTTTTTGACCAAGCCGACATTGGTCTTGTTATGGGTATTCAAGGTTCTGAGGTTGCCAAAGAGAGTTTTGATATCATTATCTTGGATGAAAATTTTGCTTCAGTTGTGAAGTGGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

42

Amino Acids

4.7

Weight (kDa)

4.05

Isoelectric Point (pI)

21.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 100
AcuI CTGAAG 1 cut(s) 93
AgsI TTSAA 1 cut(s) 50
ApoI RAATTY 1 cut(s) 100
BoxI GACNNNNGTC 1 cut(s) 30
BseGI GGATG 1 cut(s) 100
BseMII CTCAG 1 cut(s) 48
BspCNI CTCAG 1 cut(s) 49
BspHI TCATGA 1 cut(s) 125
BstDEI CTNAG 1 cut(s) 57
BstF5I GGATG 1 cut(s) 100
BstPAI GACNNNNGTC 1 cut(s) 30
BtsCI GGATG 1 cut(s) 100
CciI TCATGA 1 cut(s) 125
CviAII CATG 1 cut(s) 126
CviJI RGCY 1 cut(s) 23
CviKI_1 RGCY 1 cut(s) 23
DdeI CTNAG 1 cut(s) 57
Eco32I GATATC 1 cut(s) 82
Eco57I CTGAAG 1 cut(s) 93
EcoRV GATATC 1 cut(s) 82
FaeI CATG 1 cut(s) 129
FaiI YATR 2 cut(s) 41, 127
FatI CATG 1 cut(s) 125
FokI GGATG 1 cut(s) 107
Hin1II CATG 1 cut(s) 129
Hpy188I TCNGA 1 cut(s) 58
Hpy188III TCNNGA 1 cut(s) 126
HpyF3I CTNAG 1 cut(s) 57
Hsp92II CATG 1 cut(s) 129
MluCI AATT 1 cut(s) 100
MnlI CCTC 1 cut(s) 52
NlaIII CATG 1 cut(s) 129
PagI TCATGA 1 cut(s) 125
PshAI GACNNNNGTC 1 cut(s) 30
PsrI GAACNNNNNNTAC 2 cut(s) 37, 69
SetI ASST 2 cut(s) 55, 63
SgeI CNNG 4 cut(s) 32, 47, 62, 103
Sse9I AATT 1 cut(s) 100
TasI AATT 1 cut(s) 100
TspDTI ATGAA 1 cut(s) 111
XapI RAATTY 1 cut(s) 100
XcmI CCANNNNNNNNNTGG 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.