RchiOBHm_Chr2g0154141

transferase activity, transferring hexosyl groups

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Reverse (-)
71370082 .. 71371336
1255 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 750 bp
ATGCTCTATGTACCATTCCCATGTCAAGGTCACATTAAGCCATTCCTCAAATTTGCAAAGCTCCTGCACCATAGAGACCGCAAATCACTTGATGGCTTGCCGGACATTCAGTTTGAAGCCATCCCAGATGGCTTACCACCTAATTCAGATTCAGATTCCATACAAGACATCACAGCTAATGTTGATTCCATTGATAAGAACTTCCTGTCTCCATTTTGTAACATCCTCGACAAAATCAATCCTGATGCAGCAAATTCCCACAGTACTTCTCAAGTTCTCATGCAACATGTCGTGGATGGTTTCACGAGCTTCTCCATCACAGCAGCTGAAGAACTTGGAATTCCTATTGTTATGTTCTTCACAATAGCAGCCTGTGGATTCATGGGCATCAAACAATTCCGTTCTCGGCTGGAAAAAGGTTATACACCAGTAAAGGAAACTGAGTGCCTCCAATGGCTCAAGTCCAAGGCACCAACACACAGTTGTTTATGTGAATTTTGCAGTGTAGTGGTCATGACACCACAACAGTTTGTGGAGTTTGGTTGGCGACTTGCAAATTCCAAGCTTCCCTTCTTGTGGATTATTAGGCGTGACCTGATTGTTGGAGAATCAGCGATTTTACCACCCACATTCGTGGCTGAAACAATGGAAAGAGGTGTAACAGCAAGTTGGTGCCCGCAAGAGGAGGTGCTCAACCACCCATCAGTTTGGAGGATTTTTAACTCACAGCGGGTGGAATTCAACCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

249

Amino Acids

28.16

Weight (kDa)

5.89

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 469, 672
AciI CCGC 3 cut(s) 79, 677, 730
AcsI RAATTY 6 cut(s) 50, 253, 339, 494, 556, 737
AcuI CTGAAG 1 cut(s) 348
AfaI GTAC 2 cut(s) 12, 265
AfiI CCNNNNNNNGG 3 cut(s) 26, 576, 682
AflIII ACRYGT 1 cut(s) 286
AgsI TTSAA 2 cut(s) 116, 742
AjuI GAANNNNNNNTTGG 2 cut(s) 554, 586
AleI CACNNNNGTG 1 cut(s) 632
AluBI AGCT 5 cut(s) 61, 176, 309, 326, 565
AluI AGCT 5 cut(s) 61, 176, 309, 326, 565
Alw21I GWGCWC 1 cut(s) 693
Alw26I GTCTC 2 cut(s) 69, 213
AlwNI CAGNNNCTG 1 cut(s) 326
ApeKI GCWGC 3 cut(s) 248, 323, 368
ApoI RAATTY 6 cut(s) 50, 253, 339, 494, 556, 737
ArsI GACNNNNNNTTYG 2 cut(s) 95, 127
BaeGI GKGCMC 1 cut(s) 677
BanI GGYRCC 2 cut(s) 469, 672
BauI CACGAG 1 cut(s) 304
Bbv12I GWGCWC 1 cut(s) 693
BbvI GCAGC 3 cut(s) 260, 335, 380
BccI CCATC 6 cut(s) 86, 122, 128, 290, 323, 709
BcoDI GTCTC 2 cut(s) 69, 213
BisI GCNGC 3 cut(s) 249, 324, 369
BlsI GCNGC 3 cut(s) 250, 325, 370
BmcAI AGTACT 1 cut(s) 265
BmiI GGNNCC 2 cut(s) 471, 674
BmsI GCATC 2 cut(s) 235, 396
BpuEI CTTGAG 2 cut(s) 255, 443
BsaI GGTCTC 1 cut(s) 69
BsaJI CCNNGG 1 cut(s) 465
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 576, 682
Bse1I ACTGG 1 cut(s) 428
BseDI CCNNGG 1 cut(s) 465
BseGI GGATG 3 cut(s) 120, 222, 301
BseLI CCNNNNNNNGG 3 cut(s) 26, 576, 682
BseMII CTCAG 1 cut(s) 432
BseNI ACTGG 1 cut(s) 428
BseRI GAGGAG 1 cut(s) 698
BseSI GKGCMC 1 cut(s) 677
BseXI GCAGC 3 cut(s) 260, 335, 380
BsgI GTGCAG 1 cut(s) 50
BshNI GGYRCC 2 cut(s) 469, 672
BsiHKAI GWGCWC 1 cut(s) 693
BsiSI CCGG 1 cut(s) 101
BslI CCNNNNNNNGG 3 cut(s) 26, 576, 682
BsmAI GTCTC 2 cut(s) 69, 213
Bso31I GGTCTC 1 cut(s) 69
Bsp1286I GDGCHC 2 cut(s) 677, 693
BspACI CCGC 3 cut(s) 79, 677, 730
BspCNI CTCAG 1 cut(s) 433
BspHI TCATGA 1 cut(s) 513
BspLI GGNNCC 2 cut(s) 471, 674
BspT107I GGYRCC 2 cut(s) 469, 672
BspTNI GGTCTC 1 cut(s) 69
BsrI ACTGG 1 cut(s) 428
BssECI CCNNGG 1 cut(s) 465
BssSI CACGAG 1 cut(s) 304
BssT1I CCWWGG 1 cut(s) 465
Bst2BI CACGAG 1 cut(s) 304
Bst4CI ACNGT 3 cut(s) 263, 482, 528
BstC8I GCNNGC 2 cut(s) 98, 677
BstDEI CTNAG 1 cut(s) 441
BstF5I GGATG 3 cut(s) 120, 222, 301
BstMAI GTCTC 2 cut(s) 69, 213
BstNSI RCATGY 1 cut(s) 290
BstSLI GKGCMC 1 cut(s) 677
BstV1I GCAGC 3 cut(s) 260, 335, 380
BstXI CCANNNNNNTGG 2 cut(s) 634, 708
BtsCI GGATG 3 cut(s) 120, 222, 301
BtsI GCAGTG 1 cut(s) 508
BtsIMutI CAGTG 1 cut(s) 508
Cac8I GCNNGC 2 cut(s) 98, 677
CaiI CAGNNNCTG 1 cut(s) 326
CciI TCATGA 1 cut(s) 513
Csp6I GTAC 2 cut(s) 11, 264
CviAII CATG 5 cut(s) 21, 280, 287, 382, 514
CviQI GTAC 2 cut(s) 11, 264
DdeI CTNAG 1 cut(s) 441
Eco130I CCWWGG 1 cut(s) 465
Eco31I GGTCTC 1 cut(s) 69
Eco57I CTGAAG 1 cut(s) 348
EcoRI GAATTC 2 cut(s) 339, 737
EcoT14I CCWWGG 1 cut(s) 465
ErhI CCWWGG 1 cut(s) 465
FaeI CATG 5 cut(s) 24, 283, 290, 385, 517
FalI AAGNNNNNCTT 2 cut(s) 554, 586
FatI CATG 5 cut(s) 20, 279, 286, 381, 513
FauI CCCGC 2 cut(s) 684, 723
Fnu4HI GCNGC 3 cut(s) 249, 324, 369
FokI GGATG 3 cut(s) 107, 209, 308
Fsp4HI GCNGC 3 cut(s) 249, 324, 369
GluI GCNGC 3 cut(s) 249, 324, 369
HapII CCGG 1 cut(s) 101
Hin1II CATG 5 cut(s) 24, 283, 290, 385, 517
HindIII AAGCTT 1 cut(s) 563
HinfI GANTC 5 cut(s) 149, 155, 185, 378, 608
HpaII CCGG 1 cut(s) 101
Hpy188I TCNGA 2 cut(s) 148, 154
Hpy188III TCNNGA 3 cut(s) 242, 304, 514
HpyAV CCTTC 1 cut(s) 580
HpyCH4III ACNGT 3 cut(s) 263, 482, 528
HpyCH4V TGCA 6 cut(s) 56, 67, 248, 283, 501, 554
HpyF3I CTNAG 1 cut(s) 441
Hsp92II CATG 5 cut(s) 24, 283, 290, 385, 517
LmnI GCTCC 1 cut(s) 66
LpnPI CCDG 9 cut(s) 77, 114, 138, 218, 255, 385, 395, 441, 608
Lsp1109I GCAGC 3 cut(s) 260, 335, 380
LweI GCATC 2 cut(s) 235, 396
MaeIII GTNAC 4 cut(s) 29, 218, 590, 658
MboII GAAGA 2 cut(s) 341, 349
MhlI GDGCHC 2 cut(s) 677, 693
MluCI AATT 8 cut(s) 50, 142, 253, 339, 395, 494, 556, 737
MmeI TCCRAC 1 cut(s) 583
MnlI CCTC 7 cut(s) 56, 236, 458, 647, 676, 679, 705
MseI TTAA 2 cut(s) 36, 720
MslI CAYNNNNRTG 2 cut(s) 19, 632
MspA1I CMGCKG 2 cut(s) 326, 730
MspI CCGG 1 cut(s) 101
NlaIII CATG 5 cut(s) 24, 283, 290, 385, 517
NlaIV GGNNCC 2 cut(s) 471, 674
NmeAIII GCCGAG 1 cut(s) 385
NmuCI GTSAC 2 cut(s) 29, 590
NspI RCATGY 1 cut(s) 290
OliI CACNNNNGTG 1 cut(s) 632
PagI TCATGA 1 cut(s) 513
PciI ACATGT 1 cut(s) 286
PfeI GAWTC 5 cut(s) 149, 155, 185, 378, 608
PkrI GCNGC 3 cut(s) 250, 325, 370
PscI ACATGT 1 cut(s) 286
PspN4I GGNNCC 2 cut(s) 471, 674
PstNI CAGNNNCTG 1 cut(s) 326
PvuII CAGCTG 1 cut(s) 326
RsaI GTAC 2 cut(s) 12, 265
RsaNI GTAC 2 cut(s) 11, 264
RseI CAYNNNNRTG 2 cut(s) 19, 632
SaqAI TTAA 2 cut(s) 36, 720
SatI GCNGC 3 cut(s) 249, 324, 369
ScaI AGTACT 1 cut(s) 265
SduI GDGCHC 2 cut(s) 677, 693
SfaNI GCATC 2 cut(s) 235, 396
SmiMI CAYNNNNRTG 2 cut(s) 19, 632
SmlI CTYRAG 2 cut(s) 270, 458
SmoI CTYRAG 2 cut(s) 270, 458
Sse9I AATT 8 cut(s) 50, 142, 253, 339, 395, 494, 556, 737
SsiI CCGC 3 cut(s) 79, 677, 730
StyI CCWWGG 1 cut(s) 465
TaaI ACNGT 3 cut(s) 263, 482, 528
TaqI TCGA 1 cut(s) 228
TasI AATT 8 cut(s) 50, 142, 253, 339, 395, 494, 556, 737
TatI WGTACW 1 cut(s) 263
TfiI GAWTC 5 cut(s) 149, 155, 185, 378, 608
Tru1I TTAA 2 cut(s) 36, 720
Tru9I TTAA 2 cut(s) 36, 720
TscAI CASTG 1 cut(s) 508
TseFI GTSAC 2 cut(s) 29, 590
TseI GCWGC 3 cut(s) 248, 323, 368
Tsp45I GTSAC 2 cut(s) 29, 590
TspDTI ATGAA 1 cut(s) 370
TspGWI ACGGA 1 cut(s) 389
TspRI CASTG 1 cut(s) 508
XapI RAATTY 6 cut(s) 50, 253, 339, 494, 556, 737
XceI RCATGY 1 cut(s) 290
ZrmI AGTACT 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.