TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TAF10 | PF03540 | 8 - 75 | 6.3e-21 | Transcription initiation factor TFIID 23-30kDa subunit |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 245 |
| AcyI | GRCGYC | 1 cut(s) | 198 |
| AfaI | GTAC | 1 cut(s) | 194 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 242 |
| AluBI | AGCT | 1 cut(s) | 35 |
| AluI | AGCT | 1 cut(s) | 35 |
| AlwI | GGATC | 1 cut(s) | 245 |
| ApeKI | GCWGC | 1 cut(s) | 104 |
| AspLEI | GCGC | 1 cut(s) | 150 |
| AsuHPI | GGTGA | 1 cut(s) | 124 |
| BbvCI | CCTCAGC | 1 cut(s) | 60 |
| BbvI | GCAGC | 1 cut(s) | 116 |
| BceAI | ACGGC | 1 cut(s) | 211 |
| BfmI | CTRYAG | 2 cut(s) | 80, 162 |
| BfoI | RGCGCY | 1 cut(s) | 151 |
| BglII | AGATCT | 1 cut(s) | 169 |
| BisI | GCNGC | 1 cut(s) | 105 |
| BlsI | GCNGC | 1 cut(s) | 106 |
| BmrI | ACTGGG | 1 cut(s) | 252 |
| BmsI | GCATC | 2 cut(s) | 64, 266 |
| BmuI | ACTGGG | 1 cut(s) | 252 |
| Bpu10I | CCTNAGC | 1 cut(s) | 60 |
| BsaHI | GRCGYC | 1 cut(s) | 198 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 242 |
| Bse1I | ACTGG | 1 cut(s) | 247 |
| Bse3DI | GCAATG | 2 cut(s) | 92, 182 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 242 |
| BseMI | GCAATG | 2 cut(s) | 92, 182 |
| BseMII | CTCAG | 1 cut(s) | 51 |
| BseNI | ACTGG | 1 cut(s) | 247 |
| BseXI | GCAGC | 1 cut(s) | 116 |
| BslFI | GGGAC | 1 cut(s) | 140 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 242 |
| BsmFI | GGGAC | 1 cut(s) | 140 |
| Bsp143I | GATC | 2 cut(s) | 169, 250 |
| BspCNI | CTCAG | 1 cut(s) | 52 |
| BspPI | GGATC | 1 cut(s) | 245 |
| BsrDI | GCAATG | 2 cut(s) | 92, 182 |
| BsrI | ACTGG | 1 cut(s) | 247 |
| BssMI | GATC | 2 cut(s) | 169, 250 |
| BssNI | GRCGYC | 1 cut(s) | 198 |
| BstACI | GRCGYC | 1 cut(s) | 198 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 74 |
| BstDEI | CTNAG | 1 cut(s) | 60 |
| BstH2I | RGCGCY | 1 cut(s) | 151 |
| BstHHI | GCGC | 1 cut(s) | 150 |
| BstKTI | GATC | 2 cut(s) | 172, 253 |
| BstMBI | GATC | 2 cut(s) | 169, 250 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 65, 74, 101 |
| BstSFI | CTRYAG | 2 cut(s) | 80, 162 |
| BstV1I | GCAGC | 1 cut(s) | 116 |
| BstX2I | RGATCY | 2 cut(s) | 169, 250 |
| BstYI | RGATCY | 2 cut(s) | 169, 250 |
| BtsI | GCAGTG | 1 cut(s) | 114 |
| BtsIMutI | CAGTG | 1 cut(s) | 114 |
| CfoI | GCGC | 1 cut(s) | 150 |
| CseI | GACGC | 1 cut(s) | 187 |
| Csp6I | GTAC | 1 cut(s) | 193 |
| CviAII | CATG | 1 cut(s) | 188 |
| CviJI | RGCY | 3 cut(s) | 28, 35, 234 |
| CviKI_1 | RGCY | 3 cut(s) | 28, 35, 234 |
| CviQI | GTAC | 1 cut(s) | 193 |
| DdeI | CTNAG | 1 cut(s) | 60 |
| DpnI | GATC | 2 cut(s) | 171, 252 |
| DpnII | GATC | 2 cut(s) | 169, 250 |
| FaeI | CATG | 1 cut(s) | 191 |
| FaiI | YATR | 3 cut(s) | 155, 164, 189 |
| FaqI | GGGAC | 1 cut(s) | 140 |
| FatI | CATG | 1 cut(s) | 187 |
| Fnu4HI | GCNGC | 1 cut(s) | 105 |
| Fsp4HI | GCNGC | 1 cut(s) | 105 |
| GlaI | GCGC | 1 cut(s) | 149 |
| GluI | GCNGC | 1 cut(s) | 105 |
| HaeII | RGCGCY | 1 cut(s) | 151 |
| HgaI | GACGC | 1 cut(s) | 187 |
| HhaI | GCGC | 1 cut(s) | 150 |
| Hin1I | GRCGYC | 1 cut(s) | 198 |
| Hin1II | CATG | 1 cut(s) | 191 |
| Hin6I | GCGC | 1 cut(s) | 148 |
| HinP1I | GCGC | 1 cut(s) | 148 |
| HphI | GGTGA | 1 cut(s) | 124 |
| Hpy188I | TCNGA | 1 cut(s) | 20 |
| Hpy188III | TCNNGA | 1 cut(s) | 261 |
| HpyCH4V | TGCA | 4 cut(s) | 68, 90, 187, 257 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 65, 74, 101 |
| HpyF3I | CTNAG | 1 cut(s) | 60 |
| Hsp92I | GRCGYC | 1 cut(s) | 198 |
| Hsp92II | CATG | 1 cut(s) | 191 |
| HspAI | GCGC | 1 cut(s) | 148 |
| Kzo9I | GATC | 2 cut(s) | 169, 250 |
| LpnPI | CCDG | 4 cut(s) | 14, 86, 228, 267 |
| Lsp1109I | GCAGC | 1 cut(s) | 116 |
| LweI | GCATC | 2 cut(s) | 64, 266 |
| MalI | GATC | 2 cut(s) | 171, 252 |
| MboI | GATC | 2 cut(s) | 169, 250 |
| MboII | GAAGA | 1 cut(s) | 179 |
| MflI | RGATCY | 2 cut(s) | 169, 250 |
| MluCI | AATT | 1 cut(s) | 21 |
| MnlI | CCTC | 2 cut(s) | 55, 259 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 65, 74, 101 |
| NdeII | GATC | 2 cut(s) | 169, 250 |
| NlaIII | CATG | 1 cut(s) | 191 |
| PkrI | GCNGC | 1 cut(s) | 106 |
| PsuI | RGATCY | 2 cut(s) | 169, 250 |
| RsaI | GTAC | 1 cut(s) | 194 |
| RsaNI | GTAC | 1 cut(s) | 193 |
| SatI | GCNGC | 1 cut(s) | 105 |
| Sau3AI | GATC | 2 cut(s) | 169, 250 |
| SetI | ASST | 2 cut(s) | 37, 66 |
| SfaNI | GCATC | 2 cut(s) | 64, 266 |
| SfcI | CTRYAG | 2 cut(s) | 80, 162 |
| SgeI | CNNG | 8 cut(s) | 19, 41, 108, 113, 200, 227, 255, 266 |
| Sse9I | AATT | 1 cut(s) | 21 |
| SspI | AATATT | 1 cut(s) | 221 |
| TasI | AATT | 1 cut(s) | 21 |
| TscAI | CASTG | 1 cut(s) | 114 |
| TseI | GCWGC | 1 cut(s) | 104 |
| TspRI | CASTG | 1 cut(s) | 114 |