RchiOBHm_Chr1g0315731

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
N/A
Physical Location & Seq
Reverse (-)
2765041 .. 2765468
428 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 228 bp
ATGATGACAATTGAAGATGTGGTTGAGGAATGCAAGATGTTCTACCTTGCTGGCCAAGAAACAACCTCAAGCTTGTTAACATGGACCATGATTGTCTTGGCTATGCACCCAGACGGGCAAGAAAAGGCAAGAGAAGAAGTCCTAAGAGTCTGTGGAAAAAAGGAATCCAATTTTGGGGTGTTGGGTTCAATTTGGGGTGTTGGGTTCAAACAGAACAAGTCATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.48

Weight (kDa)

5.27

Isoelectric Point (pI)

53.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 55 2.9e-12 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 52
AfiI CCNNNNNNNGG 1 cut(s) 174
AgsI TTSAA 3 cut(s) 14, 189, 208
AjuI GAANNNNNNNTTGG 2 cut(s) 156, 188
AluBI AGCT 1 cut(s) 72
AluI AGCT 1 cut(s) 72
AoxI GGCC 1 cut(s) 52
AspS9I GGNCC 1 cut(s) 84
AvaII GGWCC 1 cut(s) 84
BalI TGGCCA 1 cut(s) 54
Bme18I GGWCC 1 cut(s) 84
BmgT120I GGNCC 1 cut(s) 84
BpuEI CTTGAG 1 cut(s) 52
Bsc4I CCNNNNNNNGG 1 cut(s) 174
BseLI CCNNNNNNNGG 1 cut(s) 174
BshFI GGCC 1 cut(s) 54
BslI CCNNNNNNNGG 1 cut(s) 174
BsmI GAATGC 1 cut(s) 35
BsnI GGCC 1 cut(s) 54
BspANI GGCC 1 cut(s) 54
BstC8I GCNNGC 1 cut(s) 52
BstDEI CTNAG 1 cut(s) 143
BsuRI GGCC 1 cut(s) 54
Cac8I GCNNGC 1 cut(s) 52
Cfr13I GGNCC 1 cut(s) 84
CviAII CATG 2 cut(s) 81, 88
CviJI RGCY 3 cut(s) 54, 72, 101
CviKI_1 RGCY 3 cut(s) 54, 72, 101
DdeI CTNAG 1 cut(s) 143
EaeI YGGCCR 1 cut(s) 52
Eco47I GGWCC 1 cut(s) 84
FaeI CATG 2 cut(s) 84, 91
FaiI YATR 4 cut(s) 82, 89, 104, 223
FatI CATG 2 cut(s) 80, 87
HaeIII GGCC 1 cut(s) 54
Hin1II CATG 2 cut(s) 84, 91
HincII GTYRAC 1 cut(s) 78
HindII GTYRAC 1 cut(s) 78
HindIII AAGCTT 1 cut(s) 70
HinfI GANTC 2 cut(s) 147, 164
HpaI GTTAAC 1 cut(s) 78
Hpy166II GTNNAC 1 cut(s) 78
Hpy8I GTNNAC 1 cut(s) 78
HpyCH4V TGCA 2 cut(s) 33, 106
HpyF3I CTNAG 1 cut(s) 143
Hsp92II CATG 2 cut(s) 84, 91
KspAI GTTAAC 1 cut(s) 78
LpnPI CCDG 2 cut(s) 36, 123
MboII GAAGA 2 cut(s) 26, 146
MfeI CAATTG 1 cut(s) 9
MlsI TGGCCA 1 cut(s) 54
MluCI AATT 3 cut(s) 9, 169, 189
MluNI TGGCCA 1 cut(s) 54
MlyI GAGTC 1 cut(s) 156
MnlI CCTC 2 cut(s) 19, 76
Mox20I TGGCCA 1 cut(s) 54
MscI TGGCCA 1 cut(s) 54
MseI TTAA 1 cut(s) 77
Msp20I TGGCCA 1 cut(s) 54
MunI CAATTG 1 cut(s) 9
Mva1269I GAATGC 1 cut(s) 35
NlaIII CATG 2 cut(s) 84, 91
PctI GAATGC 1 cut(s) 35
PfeI GAWTC 1 cut(s) 164
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
PspPI GGNCC 1 cut(s) 84
SaqAI TTAA 1 cut(s) 77
Sau96I GGNCC 1 cut(s) 84
SchI GAGTC 1 cut(s) 156
SetI ASST 3 cut(s) 48, 68, 74
SinI GGWCC 1 cut(s) 84
SmlI CTYRAG 1 cut(s) 67
SmoI CTYRAG 1 cut(s) 67
Sse9I AATT 3 cut(s) 9, 169, 189
TasI AATT 3 cut(s) 9, 169, 189
TfiI GAWTC 1 cut(s) 164
Tru1I TTAA 1 cut(s) 77
Tru9I TTAA 1 cut(s) 77
VpaK11BI GGWCC 1 cut(s) 84
XcmI CCANNNNNNNNNTGG 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.