RchiOBHm_Chr1g0321191

ATP phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
N/A
Physical Location & Seq
Reverse (-)
8719697 .. 8723872
4176 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 285 bp
ATGGCTGCCGACACTCTCGATCTCCTCAAGGACTGCCAGTTTTCCATCAAGCAAGTCAATAATCCTCACCAGTACGTTGCTAAAATTCCTGAGCTGTCTAATTTGGAAGTGTGGTTTCAAAGGCCTAAGGACATTGTGAAGAAGTTGCTGTCTAGGGATTTGGACCTTGGCATTGCCGGTCTTGACACCGTTAGTGAATATGTACGGGTATTAACCATGCACTATCTACTTTTCTTTCTATTTATACTAGTTTTTGTTTTAGGGAGTAGAGTTATATATCTGTGA

Protein Analysis

94

Amino Acids

10.9

Weight (kDa)

6.71

Isoelectric Point (pI)

22.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 84
AfaI GTAC 2 cut(s) 74, 204
AgsI TTSAA 1 cut(s) 119
AhlI ACTAGT 1 cut(s) 247
AluBI AGCT 1 cut(s) 94
AluI AGCT 1 cut(s) 94
AoxI GGCC 1 cut(s) 122
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 84
AspS9I GGNCC 1 cut(s) 163
AsuHPI GGTGA 1 cut(s) 59
AvaII GGWCC 1 cut(s) 163
AxyI CCTNAGG 1 cut(s) 126
BccI CCATC 1 cut(s) 53
BcuI ACTAGT 1 cut(s) 247
BfaI CTAG 2 cut(s) 153, 248
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
Bme18I GGWCC 1 cut(s) 163
BmgT120I GGNCC 1 cut(s) 163
Bpu10I CCTNAGC 1 cut(s) 90
BpuEI CTTGAG 1 cut(s) 11
BsaJI CCNNGG 1 cut(s) 166
Bse118I RCCGGY 1 cut(s) 176
Bse1I ACTGG 2 cut(s) 37, 70
Bse21I CCTNAGG 1 cut(s) 126
Bse3DI GCAATG 1 cut(s) 171
BseDI CCNNGG 1 cut(s) 166
BseMI GCAATG 1 cut(s) 171
BseMII CTCAG 1 cut(s) 81
BseNI ACTGG 2 cut(s) 37, 70
BseRI GAGGAG 1 cut(s) 14
BshFI GGCC 1 cut(s) 124
BsiSI CCGG 1 cut(s) 177
BsnI GGCC 1 cut(s) 124
Bsp143I GATC 1 cut(s) 19
BspANI GGCC 1 cut(s) 124
BspCNI CTCAG 1 cut(s) 82
BsrDI GCAATG 1 cut(s) 171
BsrFI RCCGGY 1 cut(s) 176
BsrI ACTGG 2 cut(s) 37, 70
BssAI RCCGGY 1 cut(s) 176
BssECI CCNNGG 1 cut(s) 166
BssMI GATC 1 cut(s) 19
BssT1I CCWWGG 1 cut(s) 166
Bst4CI ACNGT 1 cut(s) 190
BstDEI CTNAG 2 cut(s) 90, 126
BstKTI GATC 1 cut(s) 22
BstMBI GATC 1 cut(s) 19
Bsu36I CCTNAGG 1 cut(s) 126
BsuRI GGCC 1 cut(s) 124
Cfr10I RCCGGY 1 cut(s) 176
Cfr13I GGNCC 1 cut(s) 163
Csp6I GTAC 2 cut(s) 73, 203
CviAII CATG 1 cut(s) 217
CviJI RGCY 3 cut(s) 5, 94, 124
CviKI_1 RGCY 3 cut(s) 5, 94, 124
CviQI GTAC 2 cut(s) 73, 203
DdeI CTNAG 2 cut(s) 90, 126
DpnI GATC 1 cut(s) 21
DpnII GATC 1 cut(s) 19
Eco130I CCWWGG 1 cut(s) 166
Eco147I AGGCCT 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 163
Eco81I CCTNAGG 1 cut(s) 126
EcoT14I CCWWGG 1 cut(s) 166
ErhI CCWWGG 1 cut(s) 166
FaeI CATG 1 cut(s) 220
FaiI YATR 5 cut(s) 201, 218, 245, 275, 277
FatI CATG 1 cut(s) 216
Fnu4HI GCNGC 1 cut(s) 6
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 2 cut(s) 153, 248
GluI GCNGC 1 cut(s) 6
HaeIII GGCC 1 cut(s) 124
HapII CCGG 1 cut(s) 177
Hin1II CATG 1 cut(s) 220
HpaII CCGG 1 cut(s) 177
HphI GGTGA 1 cut(s) 59
Hpy188III TCNNGA 3 cut(s) 17, 89, 182
HpyCH4III ACNGT 1 cut(s) 190
HpyCH4IV ACGT 1 cut(s) 75
HpyCH4V TGCA 1 cut(s) 220
HpyF3I CTNAG 2 cut(s) 90, 126
HpySE526I ACGT 1 cut(s) 75
Hsp92II CATG 1 cut(s) 220
Kzo9I GATC 1 cut(s) 19
LpnPI CCDG 4 cut(s) 50, 83, 102, 190
MaeI CTAG 2 cut(s) 153, 248
MaeII ACGT 1 cut(s) 75
MalI GATC 1 cut(s) 21
MboI GATC 1 cut(s) 19
MboII GAAGA 1 cut(s) 151
MluCI AATT 2 cut(s) 84, 100
MnlI CCTC 2 cut(s) 35, 75
MseI TTAA 1 cut(s) 212
MspI CCGG 1 cut(s) 177
NdeII GATC 1 cut(s) 19
NlaIII CATG 1 cut(s) 220
PceI AGGCCT 1 cut(s) 124
PkrI GCNGC 1 cut(s) 7
PspPI GGNCC 1 cut(s) 163
RsaI GTAC 2 cut(s) 74, 204
RsaNI GTAC 2 cut(s) 73, 203
SaqAI TTAA 1 cut(s) 212
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 19
Sau96I GGNCC 1 cut(s) 163
SetI ASST 3 cut(s) 78, 96, 168
SinI GGWCC 1 cut(s) 163
SmlI CTYRAG 1 cut(s) 26
SmoI CTYRAG 1 cut(s) 26
SpeI ACTAGT 1 cut(s) 247
Sse9I AATT 2 cut(s) 84, 100
SseBI AGGCCT 1 cut(s) 124
SspMI CTAG 2 cut(s) 153, 248
StuI AGGCCT 1 cut(s) 124
StyI CCWWGG 1 cut(s) 166
TaaI ACNGT 1 cut(s) 190
TaiI ACGT 1 cut(s) 78
TaqI TCGA 1 cut(s) 18
TasI AATT 2 cut(s) 84, 100
Tru1I TTAA 1 cut(s) 212
Tru9I TTAA 1 cut(s) 212
TseI GCWGC 1 cut(s) 5
VpaK11BI GGWCC 1 cut(s) 163
XapI RAATTY 1 cut(s) 84
XspI CTAG 2 cut(s) 153, 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.