RchiOBHm_Chr1g0325291

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
N/A
Physical Location & Seq
Reverse (-)
13258099 .. 13260791
2693 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 228 bp
ATGGGTTTGGTCGAGTGGGTGGCAGAGTGGGTGACAGATGTCACCATTTTGTGGTCTCTTCTAATCACATCATCTTCAACCCACATTCACAGCCATGCTGGTTATGGGATTGTGACACTTGTCCAATTAGATGTAGTTGAAGGCCTTGAAAGTGCTCCATCGGCCCTGATTGGACTCTTTACAGGTCGCAATGTCGGAAAGCAGGTTGTTGTTGTTTCCCGAGAATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.07

Weight (kDa)

5.11

Isoelectric Point (pI)

24.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 193
AccB7I CCANNNNNTGG 1 cut(s) 51
AfiI CCNNNNNNNGG 1 cut(s) 51
AgsI TTSAA 3 cut(s) 78, 140, 149
Alw21I GWGCWC 1 cut(s) 157
Alw26I GTCTC 1 cut(s) 60
Ama87I CYCGRG 1 cut(s) 219
AoxI GGCC 2 cut(s) 142, 162
AspS9I GGNCC 1 cut(s) 163
AsuHPI GGTGA 2 cut(s) 34, 43
AvaI CYCGRG 1 cut(s) 219
Bbv12I GWGCWC 1 cut(s) 157
BccI CCATC 1 cut(s) 166
BcoDI GTCTC 1 cut(s) 60
BfuAI ACCTGC 1 cut(s) 193
BmeT110I CYCGRG 1 cut(s) 219
BmgT120I GGNCC 1 cut(s) 163
BoxI GACNNNNGTC 2 cut(s) 38, 119
BsaI GGTCTC 1 cut(s) 60
Bsc4I CCNNNNNNNGG 1 cut(s) 51
Bse3DI GCAATG 1 cut(s) 196
BseLI CCNNNNNNNGG 1 cut(s) 51
BseMI GCAATG 1 cut(s) 196
BshFI GGCC 2 cut(s) 144, 164
BsiHKAI GWGCWC 1 cut(s) 157
BsiHKCI CYCGRG 1 cut(s) 219
BslI CCNNNNNNNGG 1 cut(s) 51
BsmAI GTCTC 1 cut(s) 60
BsnI GGCC 2 cut(s) 144, 164
Bso31I GGTCTC 1 cut(s) 60
BsoBI CYCGRG 1 cut(s) 219
Bsp1286I GDGCHC 1 cut(s) 157
BspANI GGCC 2 cut(s) 144, 164
BspMI ACCTGC 1 cut(s) 193
BspTNI GGTCTC 1 cut(s) 60
BsrDI GCAATG 1 cut(s) 196
Bst6I CTCTTC 1 cut(s) 63
BstMAI GTCTC 1 cut(s) 60
BstMWI GCNNNNNNNGC 1 cut(s) 161
BstPAI GACNNNNGTC 2 cut(s) 38, 119
BsuRI GGCC 2 cut(s) 144, 164
BveI ACCTGC 1 cut(s) 193
Cfr13I GGNCC 1 cut(s) 163
CviAII CATG 1 cut(s) 95
CviJI RGCY 3 cut(s) 93, 144, 164
CviKI_1 RGCY 3 cut(s) 93, 144, 164
Eam1104I CTCTTC 1 cut(s) 63
EarI CTCTTC 1 cut(s) 63
Eco147I AGGCCT 1 cut(s) 144
Eco31I GGTCTC 1 cut(s) 60
Eco88I CYCGRG 1 cut(s) 219
FaeI CATG 1 cut(s) 98
FaiI YATR 2 cut(s) 96, 105
FatI CATG 1 cut(s) 94
HaeIII GGCC 2 cut(s) 144, 164
Hin1II CATG 1 cut(s) 98
HinfI GANTC 1 cut(s) 174
HphI GGTGA 2 cut(s) 34, 43
Hpy188I TCNGA 1 cut(s) 197
Hpy188III TCNNGA 1 cut(s) 219
HpyAV CCTTC 1 cut(s) 134
HpyF10VI GCNNNNNNNGC 1 cut(s) 161
Hsp92II CATG 1 cut(s) 98
LmnI GCTCC 1 cut(s) 160
LpnPI CCDG 4 cut(s) 84, 168, 179, 188
MaeIII GTNAC 3 cut(s) 31, 40, 112
MboII GAAGA 2 cut(s) 50, 66
MhlI GDGCHC 1 cut(s) 157
MluCI AATT 1 cut(s) 125
MlyI GAGTC 1 cut(s) 168
MmeI TCCRAC 1 cut(s) 175
MslI CAYNNNNRTG 1 cut(s) 93
MwoI GCNNNNNNNGC 1 cut(s) 161
NlaIII CATG 1 cut(s) 98
NmuCI GTSAC 3 cut(s) 31, 40, 112
PceI AGGCCT 1 cut(s) 144
PflMI CCANNNNNTGG 1 cut(s) 51
PleI GAGTC 1 cut(s) 168
PpsI GAGTC 1 cut(s) 168
PshAI GACNNNNGTC 2 cut(s) 38, 119
PspPI GGNCC 1 cut(s) 163
RseI CAYNNNNRTG 1 cut(s) 93
Sau96I GGNCC 1 cut(s) 163
SchI GAGTC 1 cut(s) 168
SduI GDGCHC 1 cut(s) 157
SetI ASST 2 cut(s) 187, 207
SgeI CNNG 8 cut(s) 25, 107, 111, 131, 158, 178, 195, 215
SmiMI CAYNNNNRTG 1 cut(s) 93
Sse9I AATT 1 cut(s) 125
SseBI AGGCCT 1 cut(s) 144
StuI AGGCCT 1 cut(s) 144
TaqI TCGA 1 cut(s) 12
TasI AATT 1 cut(s) 125
TseFI GTSAC 3 cut(s) 31, 40, 112
Tsp45I GTSAC 3 cut(s) 31, 40, 112
Van91I CCANNNNNTGG 1 cut(s) 51
XcmI CCANNNNNNNNNTGG 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.