RchiOBHm_Chr1g0355231

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
N/A
Physical Location & Seq
Reverse (-)
47913252 .. 47914101
850 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 471 bp
ATGTCAGAATCTCATCATTCTTCTTCTGTTGAACTTCCCATGCTAGACATCTCTCAGCCCTTGAACCCATTAGCTTCTGATTTGCCTTCTCTTTCTGAAGCCTTGAAAACATGGGGTTTCTTCCACATCACCAATCATGGGATCTCCAAAGATCTTTTCACAAAACTACAAAAACTTTCAAATCACCTCTTCAGCCTCCCTTCTGATACCAAACTCAAACTTGGTCCTTTCTCTTCTATAAAAAGTTATACCCCTCATTTCATAGCCTCCCCCTTCTTTGAAAGCCTCAGAGTTTCTGGCCCAAAGTTCTCTGAGTCTGCTCAAACTTCTGCGGATGTTCTCTTTGACCAACACAACTCTGAATTCAGTGAGGTATTACATGAATATGGGAGCAAGATGGCAGAATTGTCTCAAAAAATCATAAAGATTGCTTTGATGAGCTTGGGGAGGATTTTGAGAAAAATACTATGA

Protein Analysis

156

Amino Acids

17.42

Weight (kDa)

7.11

Isoelectric Point (pI)

45.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 12 - 85 1.1e-13 non-haem dioxygenase in morphine synthesis N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 332
AclWI GGATC 1 cut(s) 149
AcsI RAATTY 1 cut(s) 362
AcuI CTGAAG 2 cut(s) 117, 175
AfiI CCNNNNNNNGG 1 cut(s) 138
AgsI TTSAA 5 cut(s) 32, 64, 106, 180, 281
AjuI GAANNNNNNNTTGG 2 cut(s) 140, 172
AluBI AGCT 2 cut(s) 74, 441
AluI AGCT 2 cut(s) 74, 441
Alw26I GTCTC 1 cut(s) 414
AlwI GGATC 1 cut(s) 149
AoxI GGCC 1 cut(s) 298
ApoI RAATTY 1 cut(s) 362
AspS9I GGNCC 2 cut(s) 224, 299
AsuHPI GGTGA 2 cut(s) 121, 176
AvaII GGWCC 1 cut(s) 224
BccI CCATC 1 cut(s) 391
BcoDI GTCTC 1 cut(s) 414
BfaI CTAG 1 cut(s) 44
BglII AGATCT 1 cut(s) 151
Bme18I GGWCC 1 cut(s) 224
BmgT120I GGNCC 2 cut(s) 224, 299
Bsc4I CCNNNNNNNGG 1 cut(s) 138
BseGI GGATG 1 cut(s) 340
BseLI CCNNNNNNNGG 1 cut(s) 138
BseMII CTCAG 3 cut(s) 68, 301, 303
BshFI GGCC 1 cut(s) 300
BslI CCNNNNNNNGG 1 cut(s) 138
BsmAI GTCTC 1 cut(s) 414
BsnI GGCC 1 cut(s) 300
Bsp143I GATC 2 cut(s) 141, 151
BspACI CCGC 1 cut(s) 332
BspANI GGCC 1 cut(s) 300
BspCNI CTCAG 3 cut(s) 67, 300, 304
BspPI GGATC 1 cut(s) 149
BssMI GATC 2 cut(s) 141, 151
Bst6I CTCTTC 2 cut(s) 194, 238
BstDEI CTNAG 3 cut(s) 54, 287, 312
BstF5I GGATG 1 cut(s) 340
BstKTI GATC 2 cut(s) 144, 154
BstMAI GTCTC 1 cut(s) 414
BstMBI GATC 2 cut(s) 141, 151
BstX2I RGATCY 2 cut(s) 141, 151
BstYI RGATCY 2 cut(s) 141, 151
BsuRI GGCC 1 cut(s) 300
BtsCI GGATG 1 cut(s) 340
BtsIMutI CAGTG 1 cut(s) 373
Cfr13I GGNCC 2 cut(s) 224, 299
CviAII CATG 4 cut(s) 40, 111, 137, 380
CviJI RGCY 8 cut(s) 58, 74, 101, 195, 266, 285, 300, 441
CviKI_1 RGCY 8 cut(s) 58, 74, 101, 195, 266, 285, 300, 441
DdeI CTNAG 3 cut(s) 54, 287, 312
DpnI GATC 2 cut(s) 143, 153
DpnII GATC 2 cut(s) 141, 151
Eam1104I CTCTTC 2 cut(s) 194, 238
EarI CTCTTC 2 cut(s) 194, 238
Eco47I GGWCC 1 cut(s) 224
Eco57I CTGAAG 2 cut(s) 117, 175
EcoRI GAATTC 1 cut(s) 362
FaeI CATG 4 cut(s) 43, 114, 140, 383
FatI CATG 4 cut(s) 39, 110, 136, 379
FokI GGATG 1 cut(s) 347
FspBI CTAG 1 cut(s) 44
HaeIII GGCC 1 cut(s) 300
Hin1II CATG 4 cut(s) 43, 114, 140, 383
HinfI GANTC 2 cut(s) 8, 314
HphI GGTGA 2 cut(s) 121, 176
Hpy188I TCNGA 7 cut(s) 7, 79, 97, 205, 290, 313, 361
HpyAV CCTTC 3 cut(s) 96, 210, 283
HpyF3I CTNAG 3 cut(s) 54, 287, 312
Hsp92II CATG 4 cut(s) 43, 114, 140, 383
Kzo9I GATC 2 cut(s) 141, 151
LmnI GCTCC 1 cut(s) 390
LpnPI CCDG 1 cut(s) 282
MaeI CTAG 1 cut(s) 44
MalI GATC 2 cut(s) 143, 153
MboI GATC 2 cut(s) 141, 151
MboII GAAGA 5 cut(s) 12, 15, 112, 181, 225
MflI RGATCY 2 cut(s) 141, 151
MluCI AATT 2 cut(s) 362, 404
MlyI GAGTC 1 cut(s) 323
MnlI CCTC 7 cut(s) 197, 206, 264, 277, 296, 364, 441
MslI CAYNNNNRTG 1 cut(s) 384
NdeII GATC 2 cut(s) 141, 151
NlaIII CATG 4 cut(s) 43, 114, 140, 383
PfeI GAWTC 1 cut(s) 8
PleI GAGTC 1 cut(s) 322
PpsI GAGTC 1 cut(s) 322
PspPI GGNCC 2 cut(s) 224, 299
PsuI RGATCY 2 cut(s) 141, 151
RseI CAYNNNNRTG 1 cut(s) 384
Sau3AI GATC 2 cut(s) 141, 151
Sau96I GGNCC 2 cut(s) 224, 299
SchI GAGTC 1 cut(s) 323
SetI ASST 4 cut(s) 76, 189, 375, 443
SinI GGWCC 1 cut(s) 224
SmiMI CAYNNNNRTG 1 cut(s) 384
Sse9I AATT 2 cut(s) 362, 404
SsiI CCGC 1 cut(s) 332
SspMI CTAG 1 cut(s) 44
TasI AATT 2 cut(s) 362, 404
TfiI GAWTC 1 cut(s) 8
TscAI CASTG 1 cut(s) 373
TspDTI ATGAA 2 cut(s) 250, 396
TspRI CASTG 1 cut(s) 373
VpaK11BI GGWCC 1 cut(s) 224
XapI RAATTY 1 cut(s) 362
XspI CTAG 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.