Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

50896123 .. 50898075

Gene Structure 1953 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 705 bp

ATGATTAGGCCGGCAGGGCGCTCCACTCTGAGGAGCGAGGTGTTGGGTTGGATGGACAAGCAGCCCAATGCCTCTGTGATTTACATTTCTTTTGGGAGCGGTGGGGTTCTGTCGGCTGATCAAATTACCGAGATGGCGTGGGGTATAGAGCTTAGAGCTCAGAGATTTATATGGGTAGTGCATCCACCAAGCAAAGATGGTGACAAAGGCAATGACATTTCAGACTACTTACCTGGAGAGTTCATGGGCTCATGGCTCGAACTCGTGACAAGGGCAGACCTGCTGCATCGCTGCTTGTGCGTTTTAGCGTGGGATTGTTTGATTTTGACTTCAGGGAATTGGAGTTGGCGTCTTGGCGAGTTGGTGCTCCCTGCAACTGATTCTGGATTTCTGGACAAGTCTATCATCCTGGATCCGCCACTGGTCGGAGGGTTCTTGTCACACTGTGGTTGGAACTCGTCGCTGGAGAGTACACTGAATGGTGTGCCAATGATCGCATGGCCGCTCTATGCGGAGCAGAAAATGATTGCTACGTTTTTCGTGGAGGAGCTGAAGGTGGCGATTCGACCTAAAGTTCTGCCGGCAAAGAGGATAGTAAGGAGGGAGGAGATTGAGATGATGGTGATGAGGAAGATTGTGGAGGAGAAAGAAGGAGATGAAATGAGGGCAAGAGCTAAAAAAGAGTGGGGAAGCAGCTTTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0006725 GO:0008150 GO:0008152 GO:0008194 GO:0009698 GO:0009808 GO:0009987 GO:0016740 GO:0016757 GO:0016758 GO:0019748 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044464 GO:0046527 GO:0047209 GO:0071704 GO:0080043 GO:0080044 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00940 map00940

Pfam Domains

Protein Families

UDPGT

Protein Analysis

234

Amino Acids

26.38

Weight (kDa)

5.56

Isoelectric Point (pI)

45.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	136 - 177	4.8e-08	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	288
AccBSI	CCGCTC	2 cut(s)	99, 505
AciI	CCGC	4 cut(s)	99, 416, 503, 512
AclWI	GGATC	2 cut(s)	407, 420
AcoI	YGGCCR	1 cut(s)	500
AcuI	CTGAAG	2 cut(s)	315, 572
AcyI	GRCGYC	1 cut(s)	349
AdeI	CACNNNGTG	1 cut(s)	446
AfaI	GTAC	1 cut(s)	472
AfiI	CCNNNNNNNGG	2 cut(s)	30, 425
AjnI	CCWGG	2 cut(s)	232, 408
AluBI	AGCT	5 cut(s)	151, 158, 550, 674, 696
AluI	AGCT	5 cut(s)	151, 158, 550, 674, 696
Alw21I	GWGCWC	2 cut(s)	160, 369
AlwI	GGATC	2 cut(s)	407, 420
AoxI	GGCC	2 cut(s)	8, 500
ApeKI	GCWGC	4 cut(s)	61, 283, 291, 693
AspLEI	GCGC	1 cut(s)	21
AsuHPI	GGTGA	2 cut(s)	212, 634
BamHI	GGATCC	1 cut(s)	412
BanII	GRGCYC	2 cut(s)	160, 251
BauI	CACGAG	1 cut(s)	263
Bbv12I	GWGCWC	2 cut(s)	160, 369
BbvI	GCAGC	3 cut(s)	73, 270, 278
BccI	CCATC	4 cut(s)	46, 127, 191, 613
BciT130I	CCWGG	2 cut(s)	234, 410
BclI	TGATCA	1 cut(s)	118
BfoI	RGCGCY	1 cut(s)	22
BfuAI	ACCTGC	1 cut(s)	288
BglI	GCCNNNNNGGC	1 cut(s)	16
BisI	GCNGC	5 cut(s)	62, 284, 292, 503, 694
BlsI	GCNGC	5 cut(s)	63, 285, 293, 504, 695
Bme1390I	CCNGG	2 cut(s)	234, 410
BmiI	GGNNCC	1 cut(s)	414
BmrFI	CCNGG	2 cut(s)	234, 410
BmsI	GCATC	2 cut(s)	190, 295
BpmI	CTGGAG	2 cut(s)	255, 485
BsaHI	GRCGYC	1 cut(s)	349
BsaXI	ACNNNNNCTCC	2 cut(s)	334, 364
Bsc4I	CCNNNNNNNGG	2 cut(s)	30, 425
Bse118I	RCCGGY	2 cut(s)	10, 580
Bse1I	ACTGG	1 cut(s)	426
Bse3DI	GCAATG	1 cut(s)	217
BseBI	CCWGG	2 cut(s)	234, 410
BseGI	GGATG	3 cut(s)	57, 181, 405
BseLI	CCNNNNNNNGG	2 cut(s)	30, 425
BseMI	GCAATG	1 cut(s)	217
BseMII	CTCAG	2 cut(s)	20, 173
BseNI	ACTGG	1 cut(s)	426
BseRI	GAGGAG	4 cut(s)	46, 560, 620, 656
BseXI	GCAGC	3 cut(s)	73, 270, 278
BshFI	GGCC	2 cut(s)	10, 502
BsiHKAI	GWGCWC	2 cut(s)	160, 369
BsiSI	CCGG	2 cut(s)	11, 581
BslI	CCNNNNNNNGG	2 cut(s)	30, 425
BsnI	GGCC	2 cut(s)	10, 502
Bsp1286I	GDGCHC	3 cut(s)	160, 251, 369
Bsp143I	GATC	3 cut(s)	118, 412, 492
BspACI	CCGC	4 cut(s)	99, 416, 503, 512
BspANI	GGCC	2 cut(s)	10, 502
BspCNI	CTCAG	2 cut(s)	21, 172
BspLI	GGNNCC	1 cut(s)	414
BspMI	ACCTGC	1 cut(s)	288
BspPI	GGATC	2 cut(s)	407, 420
BsrBI	CCGCTC	2 cut(s)	99, 505
BsrDI	GCAATG	1 cut(s)	217
BsrFI	RCCGGY	2 cut(s)	10, 580
BsrI	ACTGG	1 cut(s)	426
BssAI	RCCGGY	2 cut(s)	10, 580
BssMI	GATC	3 cut(s)	118, 412, 492
BssNI	GRCGYC	1 cut(s)	349
BssSI	CACGAG	1 cut(s)	263
Bst2BI	CACGAG	1 cut(s)	263
Bst2UI	CCWGG	2 cut(s)	234, 410
Bst4CI	ACNGT	1 cut(s)	446
BstACI	GRCGYC	1 cut(s)	349
BstC8I	GCNNGC	2 cut(s)	12, 582
BstDEI	CTNAG	3 cut(s)	29, 152, 159
BstF5I	GGATG	3 cut(s)	57, 181, 405
BstH2I	RGCGCY	1 cut(s)	22
BstHHI	GCGC	1 cut(s)	21
BstKTI	GATC	3 cut(s)	121, 415, 495
BstMBI	GATC	3 cut(s)	118, 412, 492
BstMWI	GCNNNNNNNGC	2 cut(s)	16, 297
BstNI	CCWGG	2 cut(s)	234, 410
BstSCI	CCNGG	2 cut(s)	232, 408
BstV1I	GCAGC	3 cut(s)	73, 270, 278
BstX2I	RGATCY	1 cut(s)	412
BstYI	RGATCY	1 cut(s)	412
BsuRI	GGCC	2 cut(s)	10, 502
BtgZI	GCGATG	1 cut(s)	272
BtsCI	GGATG	3 cut(s)	57, 181, 405
BtsIMutI	CAGTG	3 cut(s)	419, 442, 473
BveI	ACCTGC	1 cut(s)	288
Cac8I	GCNNGC	2 cut(s)	12, 582
CfoI	GCGC	1 cut(s)	21
Cfr10I	RCCGGY	2 cut(s)	10, 580
CseI	GACGC	1 cut(s)	338
Csp6I	GTAC	1 cut(s)	471
CviAII	CATG	3 cut(s)	244, 252, 498
CviQI	GTAC	1 cut(s)	471
DdeI	CTNAG	3 cut(s)	29, 152, 159
DpnI	GATC	3 cut(s)	120, 414, 494
DpnII	GATC	3 cut(s)	118, 412, 492
DraIII	CACNNNGTG	1 cut(s)	446
EaeI	YGGCCR	1 cut(s)	500
EciI	GGCGGA	1 cut(s)	405
Ecl136II	GAGCTC	1 cut(s)	158
Eco24I	GRGCYC	2 cut(s)	160, 251
Eco53kI	GAGCTC	1 cut(s)	158
Eco57I	CTGAAG	2 cut(s)	315, 572
EcoICRI	GAGCTC	1 cut(s)	158
EcoRII	CCWGG	2 cut(s)	232, 408
EcoT38I	GRGCYC	2 cut(s)	160, 251
FaeI	CATG	3 cut(s)	247, 255, 501
FaiI	YATR	7 cut(s)	146, 170, 172, 245, 253, 499, 510
FatI	CATG	3 cut(s)	243, 251, 497
FbaI	TGATCA	1 cut(s)	118
Fnu4HI	GCNGC	5 cut(s)	62, 284, 292, 503, 694
FokI	GGATG	3 cut(s)	64, 168, 392
FriOI	GRGCYC	2 cut(s)	160, 251
Fsp4HI	GCNGC	5 cut(s)	62, 284, 292, 503, 694
GlaI	GCGC	1 cut(s)	20
GluI	GCNGC	5 cut(s)	62, 284, 292, 503, 694
GsuI	CTGGAG	2 cut(s)	255, 485
HaeII	RGCGCY	1 cut(s)	22
HaeIII	GGCC	2 cut(s)	10, 502
HapII	CCGG	2 cut(s)	11, 581
HgaI	GACGC	1 cut(s)	338
HhaI	GCGC	1 cut(s)	21
Hin1I	GRCGYC	1 cut(s)	349
Hin1II	CATG	3 cut(s)	247, 255, 501
Hin6I	GCGC	1 cut(s)	19
HinP1I	GCGC	1 cut(s)	19
HinfI	GANTC	2 cut(s)	380, 562
HpaII	CCGG	2 cut(s)	11, 581
HphI	GGTGA	2 cut(s)	212, 634
Hpy166II	GTNNAC	1 cut(s)	473
Hpy188I	TCNGA	4 cut(s)	30, 162, 223, 428
Hpy188III	TCNNGA	3 cut(s)	265, 384, 392
Hpy8I	GTNNAC	1 cut(s)	473
Hpy99I	CGWCG	1 cut(s)	463
HpyAV	CCTTC	2 cut(s)	547, 644
HpyCH4III	ACNGT	1 cut(s)	446
HpyCH4IV	ACGT	1 cut(s)	533
HpyCH4V	TGCA	3 cut(s)	181, 286, 374
HpyF10VI	GCNNNNNNNGC	2 cut(s)	16, 297
HpyF3I	CTNAG	3 cut(s)	29, 152, 159
HpySE526I	ACGT	1 cut(s)	533
Hsp92I	GRCGYC	1 cut(s)	349
Hsp92II	CATG	3 cut(s)	247, 255, 501
HspAI	GCGC	1 cut(s)	19
KroI	GCCGGC	2 cut(s)	10, 580
KroNI	GCCGGC	2 cut(s)	12, 582
Ksp22I	TGATCA	1 cut(s)	118
Kzo9I	GATC	3 cut(s)	118, 412, 492
LmnI	GCTCC	6 cut(s)	26, 33, 96, 372, 514, 547
Lsp1109I	GCAGC	3 cut(s)	73, 270, 278
LweI	GCATC	2 cut(s)	190, 295
MaeII	ACGT	1 cut(s)	533
MaeIII	GTNAC	3 cut(s)	200, 265, 438
MalI	GATC	3 cut(s)	120, 414, 494
MbiI	CCGCTC	2 cut(s)	99, 505
MboI	GATC	3 cut(s)	118, 412, 492
MboII	GAAGA	1 cut(s)	643
MflI	RGATCY	1 cut(s)	412
MhlI	GDGCHC	3 cut(s)	160, 251, 369
MluCI	AATT	2 cut(s)	123, 337
MmeI	TCCRAC	3 cut(s)	29, 406, 431
MroNI	GCCGGC	2 cut(s)	10, 580
MspI	CCGG	2 cut(s)	11, 581
MspR9I	CCNGG	2 cut(s)	234, 410
MvaI	CCWGG	2 cut(s)	234, 410
MwoI	GCNNNNNNNGC	2 cut(s)	16, 297
NaeI	GCCGGC	2 cut(s)	12, 582
NdeII	GATC	3 cut(s)	118, 412, 492
NgoMIV	GCCGGC	2 cut(s)	10, 580
NlaIII	CATG	3 cut(s)	247, 255, 501
NlaIV	GGNNCC	1 cut(s)	414
NmuCI	GTSAC	3 cut(s)	200, 265, 438
PdiI	GCCGGC	2 cut(s)	12, 582
PfeI	GAWTC	2 cut(s)	380, 562
PfoI	TCCNGGA	1 cut(s)	408
PkrI	GCNGC	5 cut(s)	63, 285, 293, 504, 695
Psp124BI	GAGCTC	1 cut(s)	160
Psp6I	CCWGG	2 cut(s)	232, 408
PspGI	CCWGG	2 cut(s)	232, 408
PspN4I	GGNNCC	1 cut(s)	414
PsuI	RGATCY	1 cut(s)	412
RsaI	GTAC	1 cut(s)	472
RsaNI	GTAC	1 cut(s)	471
SacI	GAGCTC	1 cut(s)	160
SatI	GCNGC	5 cut(s)	62, 284, 292, 503, 694
Sau3AI	GATC	3 cut(s)	118, 412, 492
ScrFI	CCNGG	2 cut(s)	234, 410
SduI	GDGCHC	3 cut(s)	160, 251, 369
SfaNI	GCATC	2 cut(s)	190, 295
Sse9I	AATT	2 cut(s)	123, 337
SsiI	CCGC	4 cut(s)	99, 416, 503, 512
SstI	GAGCTC	1 cut(s)	160
StyD4I	CCNGG	2 cut(s)	232, 408
TaaI	ACNGT	1 cut(s)	446
TaiI	ACGT	1 cut(s)	536
TaqI	TCGA	2 cut(s)	258, 565
TasI	AATT	2 cut(s)	123, 337
TatI	WGTACW	1 cut(s)	470
TauI	GCSGC	1 cut(s)	505
TfiI	GAWTC	2 cut(s)	380, 562
TscAI	CASTG	3 cut(s)	426, 449, 480
TseFI	GTSAC	3 cut(s)	200, 265, 438
TseI	GCWGC	4 cut(s)	61, 283, 291, 693
Tsp45I	GTSAC	3 cut(s)	200, 265, 438
TspDTI	ATGAA	2 cut(s)	232, 672
TspRI	CASTG	3 cut(s)	426, 449, 480
XcmI	CCANNNNNNNNNTGG	1 cut(s)	495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.