RchiOBHm_Chr1g0319121

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
N/A
Physical Location & Seq
Reverse (-)
6812826 .. 6814749
1924 bp
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UTR
Exon/CDS
Intron
PRQ54937

Sequence Viewer

Length: 198 bp
ATGGTCCCAGTGAAATCTGATGCTTGTCGCTATATGTCTCCAGAGTATGCCATGGGAGGGATGTTTTCTGAAAAATCGGATGCATGGAACTTGTGGAATGAAGACAAGGGATTGGAGTTGGTAGATGAAACATTGGGCGATTCAAATTCCTCATTGAAAGTACTGAAATGCATGCATATCGGGCTTCTGTGTGTATAA

Protein Analysis

65

Amino Acids

7.24

Weight (kDa)

4.64

Isoelectric Point (pI)

79.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 145
AfaI GTAC 1 cut(s) 162
AfiI CCNNNNNNNGG 1 cut(s) 57
AgsI TTSAA 2 cut(s) 144, 157
Alw26I GTCTC 1 cut(s) 42
ApoI RAATTY 1 cut(s) 145
AspS9I GGNCC 1 cut(s) 4
AvaII GGWCC 1 cut(s) 4
BbsI GAAGAC 1 cut(s) 108
BcgI CGANNNNNNTGC 2 cut(s) 160, 194
BcoDI GTCTC 1 cut(s) 42
BmcAI AGTACT 1 cut(s) 162
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 6
BmsI GCATC 2 cut(s) 10, 70
BpiI GAAGAC 1 cut(s) 108
BpmI CTGGAG 1 cut(s) 24
BsaJI CCNNGG 1 cut(s) 51
Bsc4I CCNNNNNNNGG 1 cut(s) 57
Bse1I ACTGG 1 cut(s) 8
BseDI CCNNGG 1 cut(s) 51
BseGI GGATG 2 cut(s) 66, 85
BseLI CCNNNNNNNGG 1 cut(s) 57
BseNI ACTGG 1 cut(s) 8
BslI CCNNNNNNNGG 1 cut(s) 57
BsmAI GTCTC 1 cut(s) 42
Bsp19I CCATGG 1 cut(s) 51
BspLI GGNNCC 1 cut(s) 6
BsrI ACTGG 1 cut(s) 8
BssECI CCNNGG 1 cut(s) 51
BssT1I CCWWGG 1 cut(s) 51
BstC8I GCNNGC 1 cut(s) 173
BstDSI CCRYGG 1 cut(s) 51
BstF5I GGATG 2 cut(s) 66, 85
BstMAI GTCTC 1 cut(s) 42
BstMWI GCNNNNNNNGC 1 cut(s) 181
BstNSI RCATGY 1 cut(s) 175
BstV2I GAAGAC 1 cut(s) 108
BtgI CCRYGG 1 cut(s) 51
BtsCI GGATG 2 cut(s) 66, 85
BtsIMutI CAGTG 1 cut(s) 15
Cac8I GCNNGC 1 cut(s) 173
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 1 cut(s) 161
CviAII CATG 3 cut(s) 52, 84, 172
CviJI RGCY 1 cut(s) 184
CviKI_1 RGCY 1 cut(s) 184
CviQI GTAC 1 cut(s) 161
Eco130I CCWWGG 1 cut(s) 51
Eco47I GGWCC 1 cut(s) 4
EcoT14I CCWWGG 1 cut(s) 51
EcoT22I ATGCAT 3 cut(s) 85, 173, 177
ErhI CCWWGG 1 cut(s) 51
FaeI CATG 3 cut(s) 55, 87, 175
FaiI YATR 8 cut(s) 33, 35, 48, 53, 85, 173, 177, 196
FatI CATG 3 cut(s) 51, 83, 171
FokI GGATG 2 cut(s) 73, 92
GsuI CTGGAG 1 cut(s) 24
Hin1II CATG 3 cut(s) 55, 87, 175
HinfI GANTC 1 cut(s) 140
Hpy188I TCNGA 3 cut(s) 19, 70, 79
Hpy188III TCNNGA 1 cut(s) 41
HpyCH4V TGCA 3 cut(s) 83, 171, 175
HpyF10VI GCNNNNNNNGC 1 cut(s) 181
Hsp92II CATG 3 cut(s) 55, 87, 175
LpnPI CCDG 2 cut(s) 21, 54
LweI GCATC 2 cut(s) 10, 70
MboII GAAGA 1 cut(s) 113
MluCI AATT 1 cut(s) 145
MnlI CCTC 2 cut(s) 50, 160
Mph1103I ATGCAT 3 cut(s) 85, 173, 177
MwoI GCNNNNNNNGC 1 cut(s) 181
NcoI CCATGG 1 cut(s) 51
NlaIII CATG 3 cut(s) 55, 87, 175
NlaIV GGNNCC 1 cut(s) 6
NsiI ATGCAT 3 cut(s) 85, 173, 177
NspI RCATGY 1 cut(s) 175
PaeI GCATGC 1 cut(s) 175
PfeI GAWTC 1 cut(s) 140
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 1 cut(s) 4
RsaI GTAC 1 cut(s) 162
RsaNI GTAC 1 cut(s) 161
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 1 cut(s) 162
SfaNI GCATC 2 cut(s) 10, 70
SgeI CNNG 9 cut(s) 20, 36, 53, 64, 96, 103, 118, 184, 193
SinI GGWCC 1 cut(s) 4
SphI GCATGC 1 cut(s) 175
Sse9I AATT 1 cut(s) 145
StyI CCWWGG 1 cut(s) 51
TasI AATT 1 cut(s) 145
TatI WGTACW 1 cut(s) 160
TfiI GAWTC 1 cut(s) 140
TscAI CASTG 1 cut(s) 15
TspDTI ATGAA 2 cut(s) 114, 141
TspRI CASTG 1 cut(s) 15
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 1 cut(s) 145
XceI RCATGY 1 cut(s) 175
ZrmI AGTACT 1 cut(s) 162
Zsp2I ATGCAT 3 cut(s) 85, 173, 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.