RchiOBHm_Chr2g0138431

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Forward (+)
56122022 .. 56124720
2699 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50912

Sequence Viewer

Length: 291 bp
ATGGCTCTGTATTTAGAGGAGTATTACGTAGTGGCCGTTTTGGAGCCATTAAGATGTCTGGGAAATTCCAAATCAAATGGACAAGATTTTGTGAGCAAAGTGGCTACAATTGGAAGGATTTACAATAGACTACCCCGTAAAGTGTCAAGAAAAGCACGGGGGACAATTGGATATATTGTGCCAGAGTTGTTCTACAAAAATATCGGAGGTGGCATGTATATAGTTGATGTGTATAGTTTTGGAATGTTGTTGATGGAAATGGCAAGTAGACGGAAAAATTTCAAAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

96

Amino Acids

11.0

Weight (kDa)

9.71

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 268
AcoI YGGCCR 1 cut(s) 33
AcsI RAATTY 2 cut(s) 64, 277
AgsI TTSAA 1 cut(s) 283
AoxI GGCC 1 cut(s) 33
ApoI RAATTY 2 cut(s) 64, 277
Asp700I GAANNNNTTC 1 cut(s) 278
BccI CCATC 1 cut(s) 247
BceAI ACGGC 1 cut(s) 20
BmiI GGNNCC 1 cut(s) 45
BsaAI YACGTR 1 cut(s) 28
BseRI GAGGAG 1 cut(s) 32
BshFI GGCC 1 cut(s) 35
BslFI GGGAC 1 cut(s) 175
BsmFI GGGAC 1 cut(s) 175
BsnI GGCC 1 cut(s) 35
BspANI GGCC 1 cut(s) 35
BspLI GGNNCC 1 cut(s) 45
BstBAI YACGTR 1 cut(s) 28
BstNSI RCATGY 1 cut(s) 217
BstSNI TACGTA 1 cut(s) 28
BsuRI GGCC 1 cut(s) 35
CviAII CATG 1 cut(s) 214
CviJI RGCY 4 cut(s) 5, 35, 46, 104
CviKI_1 RGCY 4 cut(s) 5, 35, 46, 104
EaeI YGGCCR 1 cut(s) 33
Eco105I TACGTA 1 cut(s) 28
FaeI CATG 1 cut(s) 217
FaiI YATR 5 cut(s) 174, 215, 219, 221, 234
FaqI GGGAC 1 cut(s) 175
FatI CATG 1 cut(s) 213
FblI GTMKAC 1 cut(s) 268
HaeIII GGCC 1 cut(s) 35
Hin1II CATG 1 cut(s) 217
Hpy166II GTNNAC 1 cut(s) 269
Hpy188I TCNGA 1 cut(s) 206
Hpy188III TCNNGA 1 cut(s) 147
Hpy8I GTNNAC 1 cut(s) 269
HpyAV CCTTC 1 cut(s) 108
HpyCH4IV ACGT 1 cut(s) 27
HpySE526I ACGT 1 cut(s) 27
Hsp92II CATG 1 cut(s) 217
LmnI GCTCC 1 cut(s) 43
LpnPI CCDG 2 cut(s) 44, 195
MaeII ACGT 1 cut(s) 27
MfeI CAATTG 2 cut(s) 108, 165
MluCI AATT 4 cut(s) 64, 108, 165, 277
MnlI CCTC 2 cut(s) 10, 200
MroXI GAANNNNTTC 1 cut(s) 278
MseI TTAA 1 cut(s) 50
MslI CAYNNNNRTG 1 cut(s) 52
MunI CAATTG 2 cut(s) 108, 165
NlaIII CATG 1 cut(s) 217
NlaIV GGNNCC 1 cut(s) 45
NspI RCATGY 1 cut(s) 217
PcsI WCGNNNNNNNCGW 1 cut(s) 33
PdmI GAANNNNTTC 1 cut(s) 278
Ppu21I YACGTR 1 cut(s) 28
PspN4I GGNNCC 1 cut(s) 45
RseI CAYNNNNRTG 1 cut(s) 52
SaqAI TTAA 1 cut(s) 50
SetI ASST 2 cut(s) 30, 211
SgeI CNNG 9 cut(s) 71, 95, 147, 159, 168, 170, 194, 226, 276
SmiMI CAYNNNNRTG 1 cut(s) 52
SnaBI TACGTA 1 cut(s) 28
Sse9I AATT 4 cut(s) 64, 108, 165, 277
TaiI ACGT 1 cut(s) 30
TasI AATT 4 cut(s) 64, 108, 165, 277
Tru1I TTAA 1 cut(s) 50
Tru9I TTAA 1 cut(s) 50
TspGWI ACGGA 1 cut(s) 286
XapI RAATTY 2 cut(s) 64, 277
XceI RCATGY 1 cut(s) 217
XmiI GTMKAC 1 cut(s) 268
XmnI GAANNNNTTC 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.