RchiOBHm_Chr2g0160121

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
N/A
Physical Location & Seq
Reverse (-)
76085040 .. 76085331
292 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52860

Sequence Viewer

Length: 171 bp
ATGGGCAGAATATTTTCCAAAAAATCTGATGTCTACACTTTCGGAGTTTTGGTATTGGAGATTATTAGCAGTAAGAAGACTACCGGCTTTTATTTATCAACAGCTAGGCTTTCTAGCCTATGCATGGAAGTTGTGGAACAAAGGCAAGGGATTGCAGTTAGTAGATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

56

Amino Acids

6.22

Weight (kDa)

9.74

Isoelectric Point (pI)

46.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 33
AfiI CCNNNNNNNGG 1 cut(s) 124
AluBI AGCT 1 cut(s) 104
AluI AGCT 1 cut(s) 104
Asp700I GAANNNNTTC 1 cut(s) 13
BbsI GAAGAC 1 cut(s) 83
BfaI CTAG 2 cut(s) 105, 114
BpiI GAAGAC 1 cut(s) 83
BsaXI ACNNNNNCTCC 2 cut(s) 36, 66
Bsc4I CCNNNNNNNGG 1 cut(s) 124
Bse118I RCCGGY 1 cut(s) 83
BseLI CCNNNNNNNGG 1 cut(s) 124
BsiSI CCGG 1 cut(s) 84
BslI CCNNNNNNNGG 1 cut(s) 124
Bsp143I GATC 1 cut(s) 164
BspHI TCATGA 1 cut(s) 167
BsrFI RCCGGY 1 cut(s) 83
BssAI RCCGGY 1 cut(s) 83
BssMI GATC 1 cut(s) 164
BstKTI GATC 1 cut(s) 167
BstMBI GATC 1 cut(s) 164
BstV2I GAAGAC 1 cut(s) 83
CciI TCATGA 1 cut(s) 167
Cfr10I RCCGGY 1 cut(s) 83
CviAII CATG 2 cut(s) 124, 168
CviJI RGCY 4 cut(s) 87, 104, 109, 117
CviKI_1 RGCY 4 cut(s) 87, 104, 109, 117
DpnI GATC 1 cut(s) 166
DpnII GATC 1 cut(s) 164
EcoT22I ATGCAT 1 cut(s) 125
FaeI CATG 2 cut(s) 127, 171
FaiI YATR 3 cut(s) 121, 125, 169
FatI CATG 2 cut(s) 123, 167
FblI GTMKAC 1 cut(s) 33
FspBI CTAG 2 cut(s) 105, 114
HapII CCGG 1 cut(s) 84
Hin1II CATG 2 cut(s) 127, 171
HpaII CCGG 1 cut(s) 84
Hpy166II GTNNAC 1 cut(s) 34
Hpy188I TCNGA 2 cut(s) 28, 44
Hpy188III TCNNGA 1 cut(s) 168
Hpy8I GTNNAC 1 cut(s) 34
HpyCH4V TGCA 2 cut(s) 123, 155
Hsp92II CATG 2 cut(s) 127, 171
Kzo9I GATC 1 cut(s) 164
LpnPI CCDG 1 cut(s) 97
MaeI CTAG 2 cut(s) 105, 114
MalI GATC 1 cut(s) 166
MboI GATC 1 cut(s) 164
MboII GAAGA 1 cut(s) 88
Mph1103I ATGCAT 1 cut(s) 125
MroXI GAANNNNTTC 1 cut(s) 13
MspI CCGG 1 cut(s) 84
NdeII GATC 1 cut(s) 164
NlaIII CATG 2 cut(s) 127, 171
NsiI ATGCAT 1 cut(s) 125
PagI TCATGA 1 cut(s) 167
PdmI GAANNNNTTC 1 cut(s) 13
Sau3AI GATC 1 cut(s) 164
SetI ASST 1 cut(s) 106
SgeI CNNG 5 cut(s) 96, 117, 126, 136, 158
SspI AATATT 1 cut(s) 12
SspMI CTAG 2 cut(s) 105, 114
XmiI GTMKAC 1 cut(s) 33
XmnI GAANNNNTTC 1 cut(s) 13
XspI CTAG 2 cut(s) 105, 114
Zsp2I ATGCAT 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.