RchiOBHm_Chr3g0481791

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
N/A
Physical Location & Seq
Reverse (-)
27886179 .. 27886400
222 bp
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UTR
Exon/CDS
Intron
PRQ44670

Sequence Viewer

Length: 222 bp
ATGCATGATGATGGGACTGAACGGCCTTCCATGAATGATGTTGTAAGAAGGCTTGAGATTGCATTGGACCTTCAACCAAGCGCACAGGGGAACGAAAACTGCACTGAAAGGATTGGTGAAACTGAAACAAGCATTAGCGAGCAAAGTTGTGCAACCAACAATTCCATTGTATGCATATCTGGGATAATCTTCTCTGAGGTCAACAATCCGAGTGGGAGATGA

Protein Analysis

73

Amino Acids

7.94

Weight (kDa)

4.34

Isoelectric Point (pI)

68.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 74
AoxI GGCC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 83
AspS9I GGNCC 1 cut(s) 67
AsuHPI GGTGA 1 cut(s) 128
AvaII GGWCC 1 cut(s) 67
BccI CCATC 1 cut(s) 5
BceAI ACGGC 1 cut(s) 38
Bme18I GGWCC 1 cut(s) 67
BmgT120I GGNCC 1 cut(s) 67
BpuEI CTTGAG 1 cut(s) 74
BseMII CTCAG 1 cut(s) 186
BsgI GTGCAG 1 cut(s) 85
BshFI GGCC 1 cut(s) 25
BslFI GGGAC 1 cut(s) 28
BsmFI GGGAC 1 cut(s) 28
BsnI GGCC 1 cut(s) 25
BspANI GGCC 1 cut(s) 25
BspCNI CTCAG 1 cut(s) 187
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 1 cut(s) 195
BstHHI GCGC 1 cut(s) 83
BsuRI GGCC 1 cut(s) 25
BtsIMutI CAGTG 1 cut(s) 102
Cac8I GCNNGC 1 cut(s) 140
CfoI GCGC 1 cut(s) 83
Cfr13I GGNCC 1 cut(s) 67
CspCI CAANNNNNGTGG 1 cut(s) 193
CviAII CATG 2 cut(s) 5, 31
CviJI RGCY 2 cut(s) 25, 52
CviKI_1 RGCY 2 cut(s) 25, 52
DdeI CTNAG 1 cut(s) 195
Eco47I GGWCC 1 cut(s) 67
EcoT22I ATGCAT 2 cut(s) 6, 176
FaeI CATG 2 cut(s) 8, 34
FaiI YATR 4 cut(s) 6, 32, 172, 176
FaqI GGGAC 1 cut(s) 28
FatI CATG 2 cut(s) 4, 30
GlaI GCGC 1 cut(s) 82
HaeIII GGCC 1 cut(s) 25
HhaI GCGC 1 cut(s) 83
Hin1II CATG 2 cut(s) 8, 34
Hin6I GCGC 1 cut(s) 81
HinP1I GCGC 1 cut(s) 81
HincII GTYRAC 1 cut(s) 202
HindII GTYRAC 1 cut(s) 202
HphI GGTGA 1 cut(s) 128
Hpy166II GTNNAC 1 cut(s) 202
Hpy188I TCNGA 2 cut(s) 196, 210
Hpy8I GTNNAC 1 cut(s) 202
HpyAV CCTTC 3 cut(s) 36, 42, 80
HpyCH4V TGCA 5 cut(s) 4, 62, 102, 152, 174
HpyF3I CTNAG 1 cut(s) 195
Hsp92II CATG 2 cut(s) 8, 34
HspAI GCGC 1 cut(s) 81
LpnPI CCDG 2 cut(s) 71, 165
MboII GAAGA 1 cut(s) 181
MluCI AATT 1 cut(s) 160
MnlI CCTC 1 cut(s) 190
Mph1103I ATGCAT 2 cut(s) 6, 176
MslI CAYNNNNRTG 1 cut(s) 9
NlaIII CATG 2 cut(s) 8, 34
NsiI ATGCAT 2 cut(s) 6, 176
PspPI GGNCC 1 cut(s) 67
RseI CAYNNNNRTG 1 cut(s) 9
Sau96I GGNCC 1 cut(s) 67
SetI ASST 2 cut(s) 72, 201
SgeI CNNG 8 cut(s) 17, 43, 65, 90, 98, 141, 151, 192
SinI GGWCC 1 cut(s) 67
SmiMI CAYNNNNRTG 1 cut(s) 9
SmlI CTYRAG 1 cut(s) 53
SmoI CTYRAG 1 cut(s) 53
Sse9I AATT 1 cut(s) 160
TasI AATT 1 cut(s) 160
TscAI CASTG 1 cut(s) 109
TspDTI ATGAA 1 cut(s) 47
TspRI CASTG 1 cut(s) 109
VpaK11BI GGWCC 1 cut(s) 67
Zsp2I ATGCAT 2 cut(s) 6, 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.