TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 3 - 40 | 3.4e-09 | Disease resistance protein Roq1-like, winged-helix domain |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 168 |
| AgsI | TTSAA | 2 cut(s) | 224, 247 |
| Ama87I | CYCGRG | 1 cut(s) | 131 |
| ApeKI | GCWGC | 1 cut(s) | 141 |
| AseI | ATTAAT | 1 cut(s) | 203 |
| AsuC2I | CCSGG | 2 cut(s) | 132, 133 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 111 |
| AvaI | CYCGRG | 1 cut(s) | 131 |
| BbvI | GCAGC | 1 cut(s) | 153 |
| BcnI | CCSGG | 2 cut(s) | 132, 133 |
| BisI | GCNGC | 1 cut(s) | 142 |
| BlsI | GCNGC | 1 cut(s) | 143 |
| Bme1390I | CCNGG | 2 cut(s) | 132, 133 |
| BmeT110I | CYCGRG | 1 cut(s) | 131 |
| BmrFI | CCNGG | 2 cut(s) | 132, 133 |
| BmsI | GCATC | 1 cut(s) | 60 |
| BpuMI | CCSGG | 2 cut(s) | 132, 133 |
| BsaJI | CCNNGG | 1 cut(s) | 131 |
| BseDI | CCNNGG | 1 cut(s) | 131 |
| BseGI | GGATG | 1 cut(s) | 75 |
| BseXI | GCAGC | 1 cut(s) | 153 |
| BsiHKCI | CYCGRG | 1 cut(s) | 131 |
| BsiSI | CCGG | 1 cut(s) | 132 |
| BsoBI | CYCGRG | 1 cut(s) | 131 |
| BssECI | CCNNGG | 1 cut(s) | 131 |
| Bst4CI | ACNGT | 1 cut(s) | 193 |
| BstF5I | GGATG | 1 cut(s) | 75 |
| BstSCI | CCNGG | 2 cut(s) | 130, 131 |
| BstV1I | GCAGC | 1 cut(s) | 153 |
| BtsCI | GGATG | 1 cut(s) | 75 |
| Cfr9I | CCCGGG | 1 cut(s) | 131 |
| CviAII | CATG | 1 cut(s) | 74 |
| CviJI | RGCY | 1 cut(s) | 35 |
| CviKI_1 | RGCY | 1 cut(s) | 35 |
| Eco88I | CYCGRG | 1 cut(s) | 131 |
| EcoT22I | ATGCAT | 1 cut(s) | 75 |
| FaeI | CATG | 1 cut(s) | 77 |
| FaiI | YATR | 5 cut(s) | 75, 104, 200, 242, 251 |
| FatI | CATG | 1 cut(s) | 73 |
| FblI | GTMKAC | 1 cut(s) | 168 |
| Fnu4HI | GCNGC | 1 cut(s) | 142 |
| FokI | GGATG | 1 cut(s) | 82 |
| Fsp4HI | GCNGC | 1 cut(s) | 142 |
| GluI | GCNGC | 1 cut(s) | 142 |
| HapII | CCGG | 1 cut(s) | 132 |
| Hin1II | CATG | 1 cut(s) | 77 |
| HinfI | GANTC | 1 cut(s) | 116 |
| HpaII | CCGG | 1 cut(s) | 132 |
| HphI | GGTGA | 2 cut(s) | 16, 111 |
| Hpy166II | GTNNAC | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 1 cut(s) | 230 |
| Hpy188III | TCNNGA | 1 cut(s) | 113 |
| Hpy8I | GTNNAC | 1 cut(s) | 169 |
| HpyCH4III | ACNGT | 1 cut(s) | 193 |
| HpyCH4IV | ACGT | 1 cut(s) | 174 |
| HpyCH4V | TGCA | 3 cut(s) | 17, 25, 73 |
| HpySE526I | ACGT | 1 cut(s) | 174 |
| Hsp92II | CATG | 1 cut(s) | 77 |
| LpnPI | CCDG | 3 cut(s) | 98, 135, 145 |
| Lsp1109I | GCAGC | 1 cut(s) | 153 |
| LweI | GCATC | 1 cut(s) | 60 |
| MaeII | ACGT | 1 cut(s) | 174 |
| MaeIII | GTNAC | 1 cut(s) | 117 |
| MboII | GAAGA | 3 cut(s) | 98, 170, 173 |
| MluCI | AATT | 3 cut(s) | 45, 224, 252 |
| MlyI | GAGTC | 1 cut(s) | 125 |
| Mph1103I | ATGCAT | 1 cut(s) | 75 |
| MseI | TTAA | 1 cut(s) | 203 |
| MspI | CCGG | 1 cut(s) | 132 |
| MspR9I | CCNGG | 2 cut(s) | 132, 133 |
| NciI | CCSGG | 2 cut(s) | 132, 133 |
| NlaIII | CATG | 1 cut(s) | 77 |
| NmuCI | GTSAC | 1 cut(s) | 117 |
| NsiI | ATGCAT | 1 cut(s) | 75 |
| PkrI | GCNGC | 1 cut(s) | 143 |
| PleI | GAGTC | 1 cut(s) | 124 |
| PpsI | GAGTC | 1 cut(s) | 124 |
| PshBI | ATTAAT | 1 cut(s) | 203 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 159, 191 |
| SaqAI | TTAA | 1 cut(s) | 203 |
| SatI | GCNGC | 1 cut(s) | 142 |
| SchI | GAGTC | 1 cut(s) | 125 |
| ScrFI | CCNGG | 2 cut(s) | 132, 133 |
| SetI | ASST | 2 cut(s) | 124, 177 |
| SfaNI | GCATC | 1 cut(s) | 60 |
| SgeI | CNNG | 9 cut(s) | 38, 49, 86, 91, 125, 134, 143, 144, 145 |
| SmaI | CCCGGG | 1 cut(s) | 133 |
| Sse9I | AATT | 3 cut(s) | 45, 224, 252 |
| StyD4I | CCNGG | 2 cut(s) | 130, 131 |
| TaaI | ACNGT | 1 cut(s) | 193 |
| TaiI | ACGT | 1 cut(s) | 177 |
| TasI | AATT | 3 cut(s) | 45, 224, 252 |
| Tru1I | TTAA | 1 cut(s) | 203 |
| Tru9I | TTAA | 1 cut(s) | 203 |
| TseFI | GTSAC | 1 cut(s) | 117 |
| TseI | GCWGC | 1 cut(s) | 141 |
| Tsp45I | GTSAC | 1 cut(s) | 117 |
| TspDTI | ATGAA | 1 cut(s) | 141 |
| TspMI | CCCGGG | 1 cut(s) | 131 |
| VspI | ATTAAT | 1 cut(s) | 203 |
| XmaI | CCCGGG | 1 cut(s) | 131 |
| XmiI | GTMKAC | 1 cut(s) | 168 |
| Zsp2I | ATGCAT | 1 cut(s) | 75 |