RchiOBHm_Chr5g0024991

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
N/A
Physical Location & Seq
Forward (+)
19012316 .. 19012574
259 bp
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UTR
Exon/CDS
Intron
PRQ30468

Sequence Viewer

Length: 174 bp
ATGTCTACAGTTTTGGAGTATTACTGCTTGAGAATTGAGATCATAAGTGGGAGGAAAAGCAATAGCTTCTACAATGATGATCATGTGCACAATATAGTAGGATATGCATGGAGATTATGGAACGAAGGTACATGGCTAGAACTAATGGATCCCAACATTAGGCGATTCATGTAA

Protein Analysis

57

Amino Acids

6.95

Weight (kDa)

6.02

Isoelectric Point (pI)

76.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 5
AclWI GGATC 2 cut(s) 143, 156
AfaI GTAC 1 cut(s) 130
AfiI CCNNNNNNNGG 1 cut(s) 159
AluBI AGCT 1 cut(s) 66
AluI AGCT 1 cut(s) 66
Alw21I GWGCWC 1 cut(s) 90
Alw44I GTGCAC 1 cut(s) 86
AlwI GGATC 2 cut(s) 143, 156
ApaLI GTGCAC 1 cut(s) 86
BaeGI GKGCMC 1 cut(s) 90
BamHI GGATCC 1 cut(s) 148
Bbv12I GWGCWC 1 cut(s) 90
BclI TGATCA 1 cut(s) 79
BfaI CTAG 1 cut(s) 137
BfmI CTRYAG 1 cut(s) 6
BmiI GGNNCC 1 cut(s) 150
BpuEI CTTGAG 1 cut(s) 49
Bsc4I CCNNNNNNNGG 1 cut(s) 159
BseLI CCNNNNNNNGG 1 cut(s) 159
BseSI GKGCMC 1 cut(s) 90
BsiHKAI GWGCWC 1 cut(s) 90
BslI CCNNNNNNNGG 1 cut(s) 159
Bsp1286I GDGCHC 1 cut(s) 90
Bsp143I GATC 3 cut(s) 39, 79, 148
BspLI GGNNCC 1 cut(s) 150
BspPI GGATC 2 cut(s) 143, 156
BssMI GATC 3 cut(s) 39, 79, 148
Bst4CI ACNGT 1 cut(s) 10
BstKTI GATC 3 cut(s) 42, 82, 151
BstMBI GATC 3 cut(s) 39, 79, 148
BstSFI CTRYAG 1 cut(s) 6
BstSLI GKGCMC 1 cut(s) 90
BstX2I RGATCY 1 cut(s) 148
BstYI RGATCY 1 cut(s) 148
Csp6I GTAC 1 cut(s) 129
CviAII CATG 4 cut(s) 83, 108, 132, 169
CviJI RGCY 2 cut(s) 66, 136
CviKI_1 RGCY 2 cut(s) 66, 136
CviQI GTAC 1 cut(s) 129
DpnI GATC 3 cut(s) 41, 81, 150
DpnII GATC 3 cut(s) 39, 79, 148
EcoT22I ATGCAT 1 cut(s) 109
FaeI CATG 4 cut(s) 86, 111, 135, 172
FaiI YATR 8 cut(s) 44, 84, 95, 105, 109, 118, 133, 170
FatI CATG 4 cut(s) 82, 107, 131, 168
FbaI TGATCA 1 cut(s) 79
FblI GTMKAC 1 cut(s) 5
FspBI CTAG 1 cut(s) 137
Hin1II CATG 4 cut(s) 86, 111, 135, 172
HinfI GANTC 1 cut(s) 165
Hpy166II GTNNAC 2 cut(s) 6, 88
Hpy8I GTNNAC 2 cut(s) 6, 88
HpyAV CCTTC 1 cut(s) 119
HpyCH4III ACNGT 1 cut(s) 10
HpyCH4V TGCA 2 cut(s) 88, 107
Hsp92II CATG 4 cut(s) 86, 111, 135, 172
Ksp22I TGATCA 1 cut(s) 79
Kzo9I GATC 3 cut(s) 39, 79, 148
MaeI CTAG 1 cut(s) 137
MalI GATC 3 cut(s) 41, 81, 150
MboI GATC 3 cut(s) 39, 79, 148
MflI RGATCY 1 cut(s) 148
MhlI GDGCHC 1 cut(s) 90
MluCI AATT 1 cut(s) 33
MnlI CCTC 1 cut(s) 45
Mph1103I ATGCAT 1 cut(s) 109
NdeII GATC 3 cut(s) 39, 79, 148
NlaIII CATG 4 cut(s) 86, 111, 135, 172
NlaIV GGNNCC 1 cut(s) 150
NsiI ATGCAT 1 cut(s) 109
PfeI GAWTC 1 cut(s) 165
PspN4I GGNNCC 1 cut(s) 150
PsuI RGATCY 1 cut(s) 148
RsaI GTAC 1 cut(s) 130
RsaNI GTAC 1 cut(s) 129
Sau3AI GATC 3 cut(s) 39, 79, 148
SduI GDGCHC 1 cut(s) 90
SetI ASST 2 cut(s) 68, 130
SfcI CTRYAG 1 cut(s) 6
SgeI CNNG 5 cut(s) 40, 95, 120, 144, 149
SmlI CTYRAG 1 cut(s) 28
SmoI CTYRAG 1 cut(s) 28
Sse9I AATT 1 cut(s) 33
SspMI CTAG 1 cut(s) 137
TaaI ACNGT 1 cut(s) 10
TasI AATT 1 cut(s) 33
TfiI GAWTC 1 cut(s) 165
TspDTI ATGAA 1 cut(s) 157
VneI GTGCAC 1 cut(s) 86
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 1 cut(s) 137
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.