RchiOBHm_Chr5g0036531

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
N/A
Physical Location & Seq
Forward (+)
30734895 .. 30736627
1733 bp
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UTR
Exon/CDS
Intron
PRQ31534

Sequence Viewer

Length: 156 bp
ATGCTGATGTATGAATACATACATTGCCAACAGAAGCGGGACTTCTTCATTTTTGAACTACTGTTACATTGGCCTAAACGTTTCCACATCATTTGTGGAATTGCTCGGGGTCTCCTCTATCTCCACCAAGATTTCAAGCTTAGGATTATACGTTGA

Protein Analysis

51

Amino Acids

6.46

Weight (kDa)

9.51

Isoelectric Point (pI)

35.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 37
AclI AACGTT 1 cut(s) 79
AgsI TTSAA 2 cut(s) 56, 136
AluBI AGCT 1 cut(s) 139
AluI AGCT 1 cut(s) 139
Alw26I GTCTC 1 cut(s) 116
Ama87I CYCGRG 1 cut(s) 105
AoxI GGCC 1 cut(s) 71
AvaI CYCGRG 1 cut(s) 105
BcoDI GTCTC 1 cut(s) 116
BmeT110I CYCGRG 1 cut(s) 105
Bpu10I CCTNAGC 1 cut(s) 140
BsaI GGTCTC 1 cut(s) 116
Bse3DI GCAATG 1 cut(s) 22
BseMI GCAATG 1 cut(s) 22
BseRI GAGGAG 1 cut(s) 104
BshFI GGCC 1 cut(s) 73
BsiHKCI CYCGRG 1 cut(s) 105
BslFI GGGAC 1 cut(s) 53
BsmAI GTCTC 1 cut(s) 116
BsmFI GGGAC 1 cut(s) 53
BsnI GGCC 1 cut(s) 73
Bso31I GGTCTC 1 cut(s) 116
BsoBI CYCGRG 1 cut(s) 105
BspACI CCGC 1 cut(s) 37
BspANI GGCC 1 cut(s) 73
BspTNI GGTCTC 1 cut(s) 116
BsrDI GCAATG 1 cut(s) 22
Bst4CI ACNGT 1 cut(s) 63
BstDEI CTNAG 1 cut(s) 140
BstMAI GTCTC 1 cut(s) 116
BsuRI GGCC 1 cut(s) 73
CspCI CAANNNNNGTGG 2 cut(s) 74, 109
CviJI RGCY 2 cut(s) 73, 139
CviKI_1 RGCY 2 cut(s) 73, 139
DdeI CTNAG 1 cut(s) 140
Eco31I GGTCTC 1 cut(s) 116
Eco88I CYCGRG 1 cut(s) 105
FaiI YATR 3 cut(s) 12, 20, 149
FalI AAGNNNNNCTT 2 cut(s) 26, 58
FaqI GGGAC 1 cut(s) 53
FauI CCCGC 1 cut(s) 30
HaeIII GGCC 1 cut(s) 73
HindIII AAGCTT 1 cut(s) 137
HpyCH4III ACNGT 1 cut(s) 63
HpyCH4IV ACGT 2 cut(s) 79, 151
HpyF3I CTNAG 1 cut(s) 140
HpySE526I ACGT 2 cut(s) 79, 151
MaeII ACGT 2 cut(s) 79, 151
MaeIII GTNAC 1 cut(s) 63
MboII GAAGA 1 cut(s) 37
MluCI AATT 1 cut(s) 99
MnlI CCTC 1 cut(s) 125
Psp1406I AACGTT 1 cut(s) 79
PsrI GAACNNNNNNTAC 2 cut(s) 48, 80
SetI ASST 3 cut(s) 82, 141, 154
SgeI CNNG 5 cut(s) 50, 117, 119, 140, 148
Sse9I AATT 1 cut(s) 99
SsiI CCGC 1 cut(s) 37
TaaI ACNGT 1 cut(s) 63
TaiI ACGT 2 cut(s) 82, 154
TasI AATT 1 cut(s) 99
TspDTI ATGAA 2 cut(s) 27, 37
XcmI CCANNNNNNNNNTGG 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.