RchiOBHm_Chr5g0073731

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
N/A
Physical Location & Seq
Forward (+)
79777295 .. 79780063
2769 bp
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UTR
Exon/CDS
Intron
PRQ34861

Sequence Viewer

Length: 144 bp
ATGATAACCCTTGAACAAAAGAAAATTGCAAAGAGAAGACTAATTCTTGCCAAACGGCTCCTTGTCTATGAGTATCTGGAGAATAAGAGTCTTGATCAAGCATTATTTGGTATGAGAATACCATTATCAATTTATTTCTTCTAG

Protein Analysis

47

Amino Acids

5.68

Weight (kDa)

9.99

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 14
BbsI GAAGAC 1 cut(s) 43
BceAI ACGGC 1 cut(s) 71
BclI TGATCA 1 cut(s) 94
BfaI CTAG 1 cut(s) 142
BmiI GGNNCC 1 cut(s) 59
BpiI GAAGAC 1 cut(s) 43
BpmI CTGGAG 1 cut(s) 98
Bsp143I GATC 1 cut(s) 94
BspLI GGNNCC 1 cut(s) 59
BssMI GATC 1 cut(s) 94
BstKTI GATC 1 cut(s) 97
BstMBI GATC 1 cut(s) 94
BstV2I GAAGAC 1 cut(s) 43
CviJI RGCY 1 cut(s) 58
CviKI_1 RGCY 1 cut(s) 58
DpnI GATC 1 cut(s) 96
DpnII GATC 1 cut(s) 94
FaiI YATR 2 cut(s) 69, 113
FbaI TGATCA 1 cut(s) 94
FspBI CTAG 1 cut(s) 142
FspEI CC 8 cut(s) 22, 23, 40, 62, 64, 74, 93, 135
GsuI CTGGAG 1 cut(s) 98
HinfI GANTC 1 cut(s) 88
Hpy188III TCNNGA 2 cut(s) 77, 92
HpyCH4V TGCA 1 cut(s) 29
Ksp22I TGATCA 1 cut(s) 94
Kzo9I GATC 1 cut(s) 94
LmnI GCTCC 1 cut(s) 63
LpnPI CCDG 1 cut(s) 62
MaeI CTAG 1 cut(s) 142
MalI GATC 1 cut(s) 96
MboI GATC 1 cut(s) 94
MboII GAAGA 2 cut(s) 48, 130
MluCI AATT 3 cut(s) 24, 42, 129
MlyI GAGTC 1 cut(s) 97
NdeII GATC 1 cut(s) 94
NlaIV GGNNCC 1 cut(s) 59
PleI GAGTC 1 cut(s) 96
PpsI GAGTC 1 cut(s) 96
PspN4I GGNNCC 1 cut(s) 59
Sau3AI GATC 1 cut(s) 94
SchI GAGTC 1 cut(s) 97
SgeI CNNG 6 cut(s) 23, 59, 74, 89, 104, 110
Sse9I AATT 3 cut(s) 24, 42, 129
SspMI CTAG 1 cut(s) 142
TasI AATT 3 cut(s) 24, 42, 129
XspI CTAG 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.