RchiOBHm_Chr5g0079871

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
N/A
Physical Location & Seq
Reverse (-)
85674797 .. 85675279
483 bp
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UTR
Exon/CDS
Intron
PRQ35422

Sequence Viewer

Length: 141 bp
ATGCAGTCTTTGGGAAGTCTCTTCACATGTGATGCAGCGCAATGTCTTTTTCAGTCGGAAGAGCTTTGGGTAGAGAAATGCCCTTTGTTGGAAAGAGTAATTGAAACAAGCAAGGAAACAAGCAAGCTAGGAAACAGTTAA

Protein Analysis

46

Amino Acids

5.15

Weight (kDa)

4.55

Isoelectric Point (pI)

58.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 88
AflIII ACRYGT 1 cut(s) 26
AgsI TTSAA 1 cut(s) 104
AluBI AGCT 2 cut(s) 64, 127
AluI AGCT 2 cut(s) 64, 127
Alw26I GTCTC 1 cut(s) 23
ApeKI GCWGC 1 cut(s) 35
AspLEI GCGC 1 cut(s) 40
BbvI GCAGC 1 cut(s) 47
BcoDI GTCTC 1 cut(s) 23
BfaI CTAG 1 cut(s) 128
BisI GCNGC 1 cut(s) 36
BlsI GCNGC 1 cut(s) 37
BmsI GCATC 1 cut(s) 22
Bsc4I CCNNNNNNNGG 1 cut(s) 88
Bse3DI GCAATG 1 cut(s) 47
BseLI CCNNNNNNNGG 1 cut(s) 88
BseMI GCAATG 1 cut(s) 47
BseXI GCAGC 1 cut(s) 47
BslI CCNNNNNNNGG 1 cut(s) 88
BsmAI GTCTC 1 cut(s) 23
BspQI GCTCTTC 1 cut(s) 54
BsrDI GCAATG 1 cut(s) 47
Bst4CI ACNGT 1 cut(s) 137
Bst6I CTCTTC 2 cut(s) 26, 54
BstC8I GCNNGC 1 cut(s) 125
BstHHI GCGC 1 cut(s) 40
BstMAI GTCTC 1 cut(s) 23
BstNSI RCATGY 1 cut(s) 30
BstV1I GCAGC 1 cut(s) 47
Cac8I GCNNGC 1 cut(s) 125
CfoI GCGC 1 cut(s) 40
CviAII CATG 1 cut(s) 27
CviJI RGCY 2 cut(s) 64, 127
CviKI_1 RGCY 2 cut(s) 64, 127
Eam1104I CTCTTC 2 cut(s) 26, 54
EarI CTCTTC 2 cut(s) 26, 54
FaeI CATG 1 cut(s) 30
FaiI YATR 1 cut(s) 28
FatI CATG 1 cut(s) 26
Fnu4HI GCNGC 1 cut(s) 36
Fsp4HI GCNGC 1 cut(s) 36
FspBI CTAG 1 cut(s) 128
FspEI CC 8 cut(s) 41, 52, 53, 74, 95, 96, 98, 114
GlaI GCGC 1 cut(s) 39
GluI GCNGC 1 cut(s) 36
HhaI GCGC 1 cut(s) 40
Hin1II CATG 1 cut(s) 30
Hin6I GCGC 1 cut(s) 38
HinP1I GCGC 1 cut(s) 38
Hpy188I TCNGA 1 cut(s) 58
HpyCH4III ACNGT 1 cut(s) 137
HpyCH4V TGCA 2 cut(s) 4, 35
Hsp92II CATG 1 cut(s) 30
HspAI GCGC 1 cut(s) 38
LguI GCTCTTC 1 cut(s) 54
Lsp1109I GCAGC 1 cut(s) 47
LweI GCATC 1 cut(s) 22
MaeI CTAG 1 cut(s) 128
MboII GAAGA 2 cut(s) 13, 71
MluCI AATT 1 cut(s) 99
MmeI TCCRAC 2 cut(s) 36, 69
MseI TTAA 1 cut(s) 139
NlaIII CATG 1 cut(s) 30
NspI RCATGY 1 cut(s) 30
PciI ACATGT 1 cut(s) 26
PciSI GCTCTTC 1 cut(s) 54
PkrI GCNGC 1 cut(s) 37
PscI ACATGT 1 cut(s) 26
SapI GCTCTTC 1 cut(s) 54
SaqAI TTAA 1 cut(s) 139
SatI GCNGC 1 cut(s) 36
SetI ASST 2 cut(s) 66, 129
SfaNI GCATC 1 cut(s) 22
SgeI CNNG 5 cut(s) 39, 120, 124, 132, 136
Sse9I AATT 1 cut(s) 99
SspMI CTAG 1 cut(s) 128
TaaI ACNGT 1 cut(s) 137
TasI AATT 1 cut(s) 99
Tru1I TTAA 1 cut(s) 139
Tru9I TTAA 1 cut(s) 139
TseI GCWGC 1 cut(s) 35
XceI RCATGY 1 cut(s) 30
XspI CTAG 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.