RchiOBHm_Chr6g0299031

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Reverse (-)
60260839 .. 60261036
198 bp
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UTR
Exon/CDS
Intron
PRQ26848

Sequence Viewer

Length: 198 bp
ATGGAAAGCTTTCAATCATGTTTATTAAAGTCGAACTTTTTATCGTTCTTGATATGTACCGGATATATGGCTCCAGACTACGTAATGCGTGGACACTTTTCTGTTAAATTCGATGTCTACAATTTTGGCGTGTTGGTTTTACAGATTGTAAGTGGAGAGAGAAATAATTCTCTGTCACGGAAAGCAATGATCTTATAA

Protein Analysis

65

Amino Acids

7.42

Weight (kDa)

8.74

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 196
AccI GTMKAC 1 cut(s) 117
AcsI RAATTY 1 cut(s) 107
AfaI GTAC 1 cut(s) 58
AgsI TTSAA 1 cut(s) 14
AluBI AGCT 1 cut(s) 9
AluI AGCT 1 cut(s) 9
ApoI RAATTY 1 cut(s) 107
Asp700I GAANNNNTTC 2 cut(s) 9, 166
BmiI GGNNCC 1 cut(s) 72
BpmI CTGGAG 1 cut(s) 57
BsaAI YACGTR 1 cut(s) 82
BsaWI WCCGGW 1 cut(s) 59
Bse3DI GCAATG 1 cut(s) 192
BseMI GCAATG 1 cut(s) 192
BsiSI CCGG 1 cut(s) 60
Bsp143I GATC 1 cut(s) 189
BspLI GGNNCC 1 cut(s) 72
BsrDI GCAATG 1 cut(s) 192
BssMI GATC 1 cut(s) 189
BstBAI YACGTR 1 cut(s) 82
BstKTI GATC 1 cut(s) 192
BstMBI GATC 1 cut(s) 189
BstSNI TACGTA 1 cut(s) 82
Csp6I GTAC 1 cut(s) 57
CviAII CATG 1 cut(s) 18
CviJI RGCY 2 cut(s) 9, 71
CviKI_1 RGCY 2 cut(s) 9, 71
CviQI GTAC 1 cut(s) 57
DpnI GATC 1 cut(s) 191
DpnII GATC 1 cut(s) 189
Eco105I TACGTA 1 cut(s) 82
FaeI CATG 1 cut(s) 21
FaiI YATR 5 cut(s) 19, 55, 66, 68, 196
FalI AAGNNNNNCTT 2 cut(s) 20, 52
FatI CATG 1 cut(s) 17
FblI GTMKAC 1 cut(s) 117
FspEI CC 9 cut(s) 45, 53, 73, 75, 87, 111, 119, 138, 163
GsuI CTGGAG 1 cut(s) 57
HapII CCGG 1 cut(s) 60
Hin1II CATG 1 cut(s) 21
HindIII AAGCTT 1 cut(s) 7
HpaII CCGG 1 cut(s) 60
Hpy166II GTNNAC 2 cut(s) 92, 118
Hpy188III TCNNGA 2 cut(s) 49, 74
Hpy8I GTNNAC 2 cut(s) 92, 118
HpyCH4IV ACGT 1 cut(s) 81
HpySE526I ACGT 1 cut(s) 81
Hsp92II CATG 1 cut(s) 21
Kzo9I GATC 1 cut(s) 189
LmnI GCTCC 1 cut(s) 76
LpnPI CCDG 2 cut(s) 73, 87
MaeII ACGT 1 cut(s) 81
MaeIII GTNAC 1 cut(s) 174
MalI GATC 1 cut(s) 191
MboI GATC 1 cut(s) 189
MluCI AATT 3 cut(s) 107, 121, 166
MroXI GAANNNNTTC 2 cut(s) 9, 166
MseI TTAA 2 cut(s) 26, 105
MspI CCGG 1 cut(s) 60
NdeII GATC 1 cut(s) 189
NlaIII CATG 1 cut(s) 21
NlaIV GGNNCC 1 cut(s) 72
NmuCI GTSAC 1 cut(s) 174
PdmI GAANNNNTTC 2 cut(s) 9, 166
Ppu21I YACGTR 1 cut(s) 82
PsiI TTATAA 1 cut(s) 196
PspN4I GGNNCC 1 cut(s) 72
RsaI GTAC 1 cut(s) 58
RsaNI GTAC 1 cut(s) 57
SaqAI TTAA 2 cut(s) 26, 105
Sau3AI GATC 1 cut(s) 189
SetI ASST 2 cut(s) 11, 84
SgeI CNNG 7 cut(s) 30, 61, 72, 86, 101, 142, 189
SnaBI TACGTA 1 cut(s) 82
Sse9I AATT 3 cut(s) 107, 121, 166
TaiI ACGT 1 cut(s) 84
TaqI TCGA 2 cut(s) 32, 111
TasI AATT 3 cut(s) 107, 121, 166
Tru1I TTAA 2 cut(s) 26, 105
Tru9I TTAA 2 cut(s) 26, 105
TseFI GTSAC 1 cut(s) 174
Tsp45I GTSAC 1 cut(s) 174
TspGWI ACGGA 1 cut(s) 193
XapI RAATTY 1 cut(s) 107
XmiI GTMKAC 1 cut(s) 117
XmnI GAANNNNTTC 2 cut(s) 9, 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.