RchiOBHm_Chr7g0201451
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Reverse (-)
19020031 .. 19020207
177 bp
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UTR
Exon/CDS
Intron
PRQ18032

Sequence Viewer

Length: 177 bp
ATGTTAATGGCTATGGGCGTGTTGAAATTGATCTTCATAGAAATTGATCTTGGAACAACTTACTCATGCGTTGGTGTTTGGCAACATGGGCGTGTTGAAATCATAACCAATGATCAGGGCAATAGAATAACACCATCCATATGCTGCTTTTACAAACACTGGGCGTTTAATTGGTGA
Functional Annotation

Protein Analysis

58

Amino Acids

6.72

Weight (kDa)

6.69

Isoelectric Point (pI)

22.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 13 - 52 1.8e-13 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 25, 98
AjuI GAANNNNNNNTTGG 2 cut(s) 33, 65
ApeKI GCWGC 1 cut(s) 144
BbvI GCAGC 1 cut(s) 131
BccI CCATC 1 cut(s) 142
BclI TGATCA 1 cut(s) 112
BisI GCNGC 1 cut(s) 145
BlsI GCNGC 1 cut(s) 146
BmrI ACTGGG 1 cut(s) 169
BmuI ACTGGG 1 cut(s) 169
Bse1I ACTGG 1 cut(s) 164
BseGI GGATG 1 cut(s) 134
BseNI ACTGG 1 cut(s) 164
BseXI GCAGC 1 cut(s) 131
Bsp143I GATC 3 cut(s) 30, 46, 112
BsrI ACTGG 1 cut(s) 164
BssMI GATC 3 cut(s) 30, 46, 112
BstF5I GGATG 1 cut(s) 134
BstKTI GATC 3 cut(s) 33, 49, 115
BstMBI GATC 3 cut(s) 30, 46, 112
BstMWI GCNNNNNNNGC 1 cut(s) 88
BstV1I GCAGC 1 cut(s) 131
BtsCI GGATG 1 cut(s) 134
BtsIMutI CAGTG 1 cut(s) 157
CviAII CATG 2 cut(s) 66, 86
CviJI RGCY 1 cut(s) 11
CviKI_1 RGCY 1 cut(s) 11
DpnI GATC 3 cut(s) 32, 48, 114
DpnII GATC 3 cut(s) 30, 46, 112
FaeI CATG 2 cut(s) 69, 89
FaiI YATR 7 cut(s) 14, 38, 67, 87, 104, 140, 142
FatI CATG 2 cut(s) 65, 85
FauNDI CATATG 1 cut(s) 140
FbaI TGATCA 1 cut(s) 112
Fnu4HI GCNGC 1 cut(s) 145
FokI GGATG 1 cut(s) 121
Fsp4HI GCNGC 1 cut(s) 145
GluI GCNGC 1 cut(s) 145
Hin1II CATG 2 cut(s) 69, 89
HpyF10VI GCNNNNNNNGC 1 cut(s) 88
Hsp92II CATG 2 cut(s) 69, 89
Ksp22I TGATCA 1 cut(s) 112
Kzo9I GATC 3 cut(s) 30, 46, 112
LpnPI CCDG 2 cut(s) 101, 145
Lsp1109I GCAGC 1 cut(s) 131
MalI GATC 3 cut(s) 32, 48, 114
MboI GATC 3 cut(s) 30, 46, 112
MboII GAAGA 1 cut(s) 25
MluCI AATT 3 cut(s) 26, 42, 169
MseI TTAA 2 cut(s) 5, 168
MslI CAYNNNNRTG 2 cut(s) 90, 139
MwoI GCNNNNNNNGC 1 cut(s) 88
NdeI CATATG 1 cut(s) 140
NdeII GATC 3 cut(s) 30, 46, 112
NlaIII CATG 2 cut(s) 69, 89
PkrI GCNGC 1 cut(s) 146
RseI CAYNNNNRTG 2 cut(s) 90, 139
SaqAI TTAA 2 cut(s) 5, 168
SatI GCNGC 1 cut(s) 145
Sau3AI GATC 3 cut(s) 30, 46, 112
SgeI CNNG 7 cut(s) 31, 62, 78, 98, 104, 128, 172
SmiMI CAYNNNNRTG 2 cut(s) 90, 139
Sse9I AATT 3 cut(s) 26, 42, 169
TasI AATT 3 cut(s) 26, 42, 169
Tru1I TTAA 2 cut(s) 5, 168
Tru9I TTAA 2 cut(s) 5, 168
TscAI CASTG 1 cut(s) 164
TseI GCWGC 1 cut(s) 144
TspDTI ATGAA 1 cut(s) 25
TspRI CASTG 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.