RchiOBHm_Chr7g0209701
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Reverse (-)
27154062 .. 27154325
264 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18766

Sequence Viewer

Length: 264 bp
ATGAGCATGGTTGGATTTTATATTGGCAATGAGAGTGGCACTGTAGCCATGGTAAGGGGGAGCAGTATTGATATTGTCCTCAATGATGAGTCTAAACAACAAACTCCGACTGTAGTTTGTTTTGGAGACGAGCAGCAAGTCATTGGATCAGGAGAGGCTGCAGCTTCATCTATTATGACTCCCAACTCAATCTCTCAGATTAACCGCTCAATTGGGATCCTGTGTTGCAGAGTGATCTCAAGTCGCTACCTTTATTGTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

9.35

Weight (kDa)

4.72

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 4 - 73 1.1e-09 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 207
AciI CCGC 1 cut(s) 205
AclWI GGATC 3 cut(s) 154, 211, 224
AfiI CCNNNNNNNGG 1 cut(s) 54
AluBI AGCT 1 cut(s) 164
AluI AGCT 1 cut(s) 164
Alw26I GTCTC 1 cut(s) 120
AlwI GGATC 3 cut(s) 154, 211, 224
ApeKI GCWGC 3 cut(s) 133, 158, 161
BamHI GGATCC 1 cut(s) 216
BbvI GCAGC 3 cut(s) 145, 145, 173
BcoDI GTCTC 1 cut(s) 120
BfmI CTRYAG 3 cut(s) 42, 111, 159
BisI GCNGC 3 cut(s) 134, 159, 162
BlsI GCNGC 3 cut(s) 135, 160, 163
BmiI GGNNCC 1 cut(s) 218
BpuEI CTTGAG 1 cut(s) 223
BsaJI CCNNGG 1 cut(s) 48
Bsc4I CCNNNNNNNGG 1 cut(s) 54
Bse3DI GCAATG 1 cut(s) 34
BseDI CCNNGG 1 cut(s) 48
BseLI CCNNNNNNNGG 1 cut(s) 54
BseMI GCAATG 1 cut(s) 34
BseMII CTCAG 1 cut(s) 209
BseXI GCAGC 3 cut(s) 145, 145, 173
BslI CCNNNNNNNGG 1 cut(s) 54
BsmAI GTCTC 1 cut(s) 120
BsmBI CGTCTC 1 cut(s) 120
Bsp143I GATC 3 cut(s) 146, 216, 234
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 1 cut(s) 205
BspCNI CTCAG 1 cut(s) 208
BspLI GGNNCC 1 cut(s) 218
BspMAI CTGCAG 1 cut(s) 163
BspPI GGATC 3 cut(s) 154, 211, 224
BsrBI CCGCTC 1 cut(s) 207
BsrDI GCAATG 1 cut(s) 34
BssECI CCNNGG 1 cut(s) 48
BssMI GATC 3 cut(s) 146, 216, 234
BssT1I CCWWGG 1 cut(s) 48
Bst4CI ACNGT 2 cut(s) 43, 112
BstDEI CTNAG 1 cut(s) 195
BstDSI CCRYGG 1 cut(s) 48
BstKTI GATC 3 cut(s) 149, 219, 237
BstMAI GTCTC 1 cut(s) 120
BstMBI GATC 3 cut(s) 146, 216, 234
BstSFI CTRYAG 3 cut(s) 42, 111, 159
BstV1I GCAGC 3 cut(s) 145, 145, 173
BstX2I RGATCY 1 cut(s) 216
BstYI RGATCY 1 cut(s) 216
BtgI CCRYGG 1 cut(s) 48
BtsIMutI CAGTG 1 cut(s) 39
CspCI CAANNNNNGTGG 2 cut(s) 16, 51
CviAII CATG 2 cut(s) 7, 49
CviJI RGCY 3 cut(s) 47, 158, 164
CviKI_1 RGCY 3 cut(s) 47, 158, 164
DdeI CTNAG 1 cut(s) 195
DpnI GATC 3 cut(s) 148, 218, 236
DpnII GATC 3 cut(s) 146, 216, 234
Eco130I CCWWGG 1 cut(s) 48
EcoT14I CCWWGG 1 cut(s) 48
ErhI CCWWGG 1 cut(s) 48
Esp3I CGTCTC 1 cut(s) 120
FaeI CATG 2 cut(s) 10, 52
FaiI YATR 4 cut(s) 8, 21, 50, 176
FatI CATG 2 cut(s) 6, 48
Fnu4HI GCNGC 3 cut(s) 134, 159, 162
Fsp4HI GCNGC 3 cut(s) 134, 159, 162
GluI GCNGC 3 cut(s) 134, 159, 162
Hin1II CATG 2 cut(s) 10, 52
HinfI GANTC 2 cut(s) 89, 178
Hpy188I TCNGA 2 cut(s) 108, 198
Hpy188III TCNNGA 1 cut(s) 150
HpyCH4III ACNGT 2 cut(s) 43, 112
HpyCH4V TGCA 2 cut(s) 161, 228
HpyF3I CTNAG 1 cut(s) 195
Hsp92II CATG 2 cut(s) 10, 52
Kzo9I GATC 3 cut(s) 146, 216, 234
LmnI GCTCC 1 cut(s) 60
LpnPI CCDG 2 cut(s) 135, 233
Lsp1109I GCAGC 3 cut(s) 145, 145, 173
MaeIII GTNAC 1 cut(s) 257
MalI GATC 3 cut(s) 148, 218, 236
MbiI CCGCTC 1 cut(s) 207
MboI GATC 3 cut(s) 146, 216, 234
MfeI CAATTG 1 cut(s) 210
MflI RGATCY 1 cut(s) 216
MluCI AATT 1 cut(s) 210
MlyI GAGTC 2 cut(s) 98, 172
MmeI TCCRAC 1 cut(s) 131
MnlI CCTC 2 cut(s) 89, 148
MseI TTAA 1 cut(s) 201
MunI CAATTG 1 cut(s) 210
NcoI CCATGG 1 cut(s) 48
NdeII GATC 3 cut(s) 146, 216, 234
NlaIII CATG 2 cut(s) 10, 52
NlaIV GGNNCC 1 cut(s) 218
PkrI GCNGC 3 cut(s) 135, 160, 163
PleI GAGTC 2 cut(s) 97, 172
PpsI GAGTC 2 cut(s) 97, 172
PspN4I GGNNCC 1 cut(s) 218
PstI CTGCAG 1 cut(s) 163
PsuI RGATCY 1 cut(s) 216
SaqAI TTAA 1 cut(s) 201
SatI GCNGC 3 cut(s) 134, 159, 162
Sau3AI GATC 3 cut(s) 146, 216, 234
SchI GAGTC 2 cut(s) 98, 172
SetI ASST 2 cut(s) 166, 252
SfcI CTRYAG 3 cut(s) 42, 111, 159
SgeI CNNG 7 cut(s) 19, 61, 142, 149, 162, 232, 252
SmlI CTYRAG 1 cut(s) 238
SmoI CTYRAG 1 cut(s) 238
Sse9I AATT 1 cut(s) 210
SsiI CCGC 1 cut(s) 205
StyI CCWWGG 1 cut(s) 48
TaaI ACNGT 2 cut(s) 43, 112
TasI AATT 1 cut(s) 210
Tru1I TTAA 1 cut(s) 201
Tru9I TTAA 1 cut(s) 201
TscAI CASTG 1 cut(s) 46
TseI GCWGC 3 cut(s) 133, 158, 161
TspDTI ATGAA 1 cut(s) 156
TspRI CASTG 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.