RchiOBHm_Chr7g0238291

Receptor protein kinase-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Reverse (-)
63633864 .. 63638313
4450 bp
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UTR
Exon/CDS
Intron
PRQ21354

Sequence Viewer

Length: 4176 bp
ATGAGATCTTCACCTTATAATCACAAAGTATGCTCTCCAGCCTCCCTGATCTTCTATGTTCAGCTGCTTTCCTTGTTACCATACCTTGCTTTTGCTTCTGCTAATTCAACTGAAGCAGAAGGTCTTCTCAGATGGAAAGCCAGCTTTCTGAATCGAACTGAGAATAATAATCTCACCTCCTGGACTTACCTTCCTGGCGGAGTCACCAATTCATCAACCCCATGCAATGATTGGACTGGTATTTCATGCAACAGAGATGGATGGGTGAACCGGATAAACCTTACCAATTTTGGTATACAAGGTACGCTACATGAATTTCCATTCTTGTCCTTCCCTCATCTTGAATATGTTGACCTCAGCCTGAATGTATTCTTTGATACCATTCCACCTCAGATCAGTTCTCTCTCCAAACTCATCTATCTTGATATTTCTTCTAATCATCTGACTGGGACAATCCCACCAGAACTTAGTCTTCTATCAAATCTTAAAGTCCTGCACCTAAATGAAAATAAGTTAAATGGCTCAATTCCCAAAGAAATAGGCCAACTCAAGTCTCTTTACGAGCTTGATCTCAGCACCAACAATCTAGAAGGGTCTGTTCCAGCTTCTCTCGGTAATTTGACCAACATGACCCACTTGTATCTCTCTCAAAATCAGCTTTCTGGTGCCATTCCTCCAGAGATAGGAAATCTATCTAGCTTGATCCACCTGGTCATGGATGACAACCATTTGACTGGTCCCATCCCACATCTGATCAGTTCCATCTCCAAACTCATCCATCTTAATCTATCTTATAATATGATCAACGAGACAATCCCACCAGAAATTGGCCTTCTATCAAATCTTGAAACCCTGCACCTAGATGCAAATCAGTTAAATGGCTCAATTCCCAAAGAAATAGGCCAACTCAAGTATCTTTATGAGCTTAGTCTGGGCATCAACAATCTAGAAGGGTCTATTCCGGCTTCTCTGGGTAATTTCACCAACATGACCTACTTGTATCTCCATCAAAATCAGCTTTCTGGTGCCATTCCTCCAGAGATAGGAAATCTATCTAGTTTGATCCACCTGGTCATGTATGACAACCATTTGATAGGTCCCATCCCTCCAAGTTTTGGAAACTTGAAGAACTTAGTTTTACTGTTCTTGCGATTGAATCAACTGTCTGGCCTAATTCCCAGCGAGATTGGGAATCTGAAATCCATTCAGATGCTGTCATTCAATGAGAACAATTTAACAGGTCCAATACCTCCAAGTGTAGGAAACTTAAGAGGGCTAACCATATTGAACCTGTTCAACAATCATCTTTCTGGCCTCATTCCCAGTGAGATAGGGAATATAAAATCCCTTCAGGTGCTGGTGTTGAGTGACAACTATTTAACAGGTCCAATACCGCCAAGTGTTGGAAACTTAAGAGGGCTAACCACATTGTTCATGGACAACAATCAACTTTCTGGATCTATACCCTCAGAAATAGGAAATTTGAAGTCTCTAGAGAAATTAAGCTTTTCTAGTAACACTCTTCGATATTGGTATACAGATAGACTTGCTAGTTTTCATCTGAAAGAGAAAGGGAATGTGAAACTATCCTTGGCAATGAATCAGCTCAATGGTAATATGAGAGACCTTAACCCTATAAATAAGCTTTCAGGAACTATCCCTAGAGAGATAGGGCACTTGAGATCTCTTGTATACCTAGATTTGTCTGGTCATCGACTCCATGGTTCAATTCCAATATCATTTGGTGATCTGACAAATCTTACCTTTCTCGATCTCTCTGGAAATAAGCTTTCTGGTACTATTCCTAAAGAGATAGGGAACTTGAAATCTCTTCTCATTCTAGACTTCGTCCATAATCAACTAAATGGCTCAATCCCAACATCCTTAAGTAATGTGAGGAATCTTGAAATTCTCCGTCTATCTTCAAATAAGCTTTCTTGCACTATTCCCAAAGAGGTAGGCCACTTGAAATCCCTCACGACTGTGGAATTAAACTTCAATCAACTTAGTGGTTCCATTCCCACTTCATTTGGTGACCTGAGCAGCTTAAAAATCTTAAACCTCATGAGCAACCAACTCTCTGGCTCAATCCCTCAAGAAATAGGAATTCTCAAGAACTTAAGTGAACTACAACTGGGTGATAATCAGTTTGTTGGTTACTTACCCCAAAACCTTTGCCAAGGTGGATCTCTTAGCAATTTTTCTGTAACCAATAACTATTTGATTGGTCCAATCCCCAAAAGCTTGAAAAATTGTACGAGCTTAATCAGACTCCGTCTTGATGGGAACCAATTGGAAGGCAATATATCACAAGGCTTCAGCGTTTATCCGAATCTTGATTATTTAGATTTGAGCAAGAATAACTTCTATGGTGAAGTCTCACACAATTGGGGACAATGCCCACAGTTGAGAACCCTACTAATTGCAGGGAACAACCTTACTGGTAGCATACCACCTGATATTGGCAATGCAACCCAAATTCATGTACTCGATCTTTCTTCTAATTATTTGGATGGGACTATTCCAAAGGAAATTGGGAGGTTGACTTCTTTGGTGAAGTTGAGGGTGAATGAAAATCAACTTTCTGGTCCTATACCTTCCGAATTTAGATCATTGGCTAATCTTGAATATCTTGATCTATCCACAAACAGATTCAATGAGTCGATTATACGCTTTGTAGGTGACTTCCTCAAATTAAACCACTTGAATTTGAGCAACAACAAGTTTGGAGAAGGAATTCCATCTCGTTTGGGGATGTTAAATCATGTTTCCAAACTAGATTTAAGTCACAACTCACTTACTGGTAAGATACCATCAGAGATTAGTAATATGGGCAGTTTGGAGAAGCTGAATCTGTCCCACAATAATCTCTCTGGTTTCATTCCAGCGAGTTTTGAAGGCATGCACAGTTTGTCATCCGTCGACATTTCCTACAATGACTTGGAAGGTCCACTTCCTAACAGCAAAGCATTTCAAGATGCTCCCCTAGAAGCATTGCAAGGGAACAAGGGCTTGTGTGGCGAGGGTGGAGCTTTGCAACTCTGCAATAGACAAAGCTCTAGAAAGCACCAGAAACAGAAATTTCTAATCACATTCTCTCTTCTAGCAGCACTTGCACTTCTAGCTGCTATCTTCGCAATTGTCTTTGTGATTAGAAGAAAGAAGACGCACCGAAATGGGGAAGAAACCAATACGCATGAAGAAATTTGTTTTTCCATATTAGGTTATGATGGAAAGAAGATGTATGAGGAAATCATAAGGGCAACACAAGATTTTGATTCCATATACTGCATCGGAAAGGGAGGACATGGGAGTGTATACAGAGCAAATTTGTCATCCTCCAATATAGTTGCTGTGAAGAAACTCCATCTGCTATGCAGTGATGACAATAATGTTCAGAAGGAATTCTTGAATGAAATCAGGGCACTCACTGAGATGCGACATCGAAACATTGTGAAGCTTTATGGTTTCTGTTCACATAAGCGACACTCATTTTTGGTGTATGAGTATCTAGAAAGGGGTAGCGTGACTGCAATGCTGAGCAGTGATCATGAAGCTCATGAATTGGGATGGAGTAAGAGGCTTAATATTGTGAAAGATGTTGCTAATGCTTTGTGCTATATGCACCATGATTGCTTGCCACCAGTTGTACATCGGGACATATCGAGCAAAAACATTTTGCTGGATTCTGAATACAAGGCCTATGTTTCAGATTTTGGCACTGCTAAGTTCTTAAACCCAGACTCAGCTAATTGGACTGCCCTTGCAGGCACATATGGTTATATGGCACCAGAGCTCGCTTATACAATGGAAGTAAATGAGAAATGTGATGTCTATAGCTTTGGAGTATTAACATTGGAAATAATTATGGGAAGGCATCCAGGAGATATCTTCGCATCTTTATTACCACAGGCATCGTTGGTGTCATCATCATCATCAACTGCCCATCAAATGCCGGTTATGGAGTTTTTGGACCAGCGCATTTCCCCTCCTTCACATCAAGTTGCAGGGGAAGTGCTTTCTCATTTTAAGATAGCATTTGCATGCTTGAATTCCAGACCAGAATCTCGTCCAACAATGAAACAAGTTTCTCAACTCCTCTCAACTCAAAGTCTGCATTTGTCCAAGCCATTACGTATGATAACTTGTGGTGAATTGCTTGTTCTCAATGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1391

Amino Acids

153.35

Weight (kDa)

6.61

Isoelectric Point (pI)

32.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 84 1.5e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 112 - 213 4.6e-09 Leucine-rich repeat region
LRR_14 PF23598 175 - 242 1.3e-07 Leucine-rich repeat region
LRR_8 PF13855 185 - 244 3.1e-06 Leucine rich repeat
LRR_14 PF23598 253 - 335 1.7e-06 Leucine-rich repeat region
LRR_14 PF23598 322 - 407 1.6e-08 Leucine-rich repeat region
LRR_14 PF23598 420 - 504 6.4e-12 Leucine-rich repeat region
LRR_8 PF13855 424 - 484 7.7e-06 Leucine rich repeat
LRR_14 PF23598 549 - 641 3.9e-10 Leucine-rich repeat region
LRR_8 PF13855 561 - 621 8.2e-06 Leucine rich repeat
LRR_14 PF23598 582 - 667 8.1e-09 Leucine-rich repeat region
LRR_14 PF23598 628 - 713 2.7e-07 Leucine-rich repeat region
LRR_8 PF13855 658 - 717 2.9e-07 Leucine rich repeat
LRR_14 PF23598 774 - 882 1.9e-07 Leucine-rich repeat region
LRR_8 PF13855 826 - 885 1.9e-06 Leucine rich repeat
LRR_8 PF13855 922 - 981 6.7e-11 Leucine rich repeat
Pkinase PF00069 1097 - 1365 2.1e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1098 - 1366 9.1e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 18, 795
AccB1I GGYRCC 3 cut(s) 665, 1025, 3787
AccB7I CCANNNNNTGG 3 cut(s) 827, 1115, 1403
AccI GTMKAC 5 cut(s) 295, 1535, 1692, 2922, 3318
AciI CCGC 2 cut(s) 198, 1394
AclWI GGATC 4 cut(s) 697, 1057, 1465, 2194
AcuI CTGAAG 3 cut(s) 132, 1334, 2302
AfaI GTAC 5 cut(s) 304, 1798, 2257, 2487, 3651
AfiI CCNNNNNNNGG 9 cut(s) 683, 715, 827, 1043, 1115, 1259, 1403, 2462, 3178
AflII CTTAAG 4 cut(s) 1267, 1411, 1885, 2119
AjnI CCWGG 5 cut(s) 179, 193, 708, 1068, 3880
AjuI GAANNNNNNNTTGG 2 cut(s) 1574, 1606
AleI CACNNNNGTG 1 cut(s) 1982
Alw21I GWGCWC 1 cut(s) 3798
Alw26I GTCTC 5 cut(s) 558, 803, 1494, 1617, 2383
AlwI GGATC 4 cut(s) 697, 1057, 1465, 2194
AlwNI CAGNNNCTG 2 cut(s) 1213, 1357
AoxI GGCC 7 cut(s) 541, 829, 901, 1168, 1312, 1960, 3699
ApeKI GCWGC 4 cut(s) 64, 2043, 3107, 3125
Asp700I GAANNNNTTC 6 cut(s) 123, 368, 1292, 2363, 2736, 3404
AspLEI GCGC 1 cut(s) 3981
AspS9I GGNCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
AvaII GGWCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
BaeGI GKGCMC 2 cut(s) 1677, 3427
BaeI ACNNNNGTAYC 2 cut(s) 896, 929
BanI GGYRCC 3 cut(s) 665, 1025, 3787
BanII GRGCYC 1 cut(s) 3798
BbsI GAAGAC 3 cut(s) 116, 464, 3170
Bbv12I GWGCWC 1 cut(s) 3798
BbvCI CCTCAGC 1 cut(s) 356
BbvI GCAGC 4 cut(s) 51, 2055, 3112, 3119
BciT130I CCWGG 5 cut(s) 181, 195, 710, 1070, 3882
BclI TGATCA 3 cut(s) 753, 801, 3547
BcoDI GTCTC 5 cut(s) 558, 803, 1494, 1617, 2383
BfmI CTRYAG 1 cut(s) 3835
BfrI CTTAAG 4 cut(s) 1267, 1411, 1885, 2119
BglII AGATCT 2 cut(s) 5, 1682
BisI GCNGC 4 cut(s) 65, 2044, 3108, 3126
BlpI GCTNAGC 1 cut(s) 3539
BlsI GCNGC 4 cut(s) 66, 2045, 3109, 3127
Bme1390I CCNGG 5 cut(s) 181, 195, 710, 1070, 3882
Bme18I GGWCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
BmgT120I GGNCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
BmiI GGNNCC 7 cut(s) 667, 739, 1027, 1099, 2014, 2288, 3789
BmrFI CCNGG 5 cut(s) 181, 195, 710, 1070, 3882
BmrI ACTGGG 3 cut(s) 456, 1317, 2144
BmsI GCATC 9 cut(s) 853, 945, 1200, 2968, 3300, 3426, 3886, 3905, 3923
BmuI ACTGGG 3 cut(s) 456, 1317, 2144
BpiI GAAGAC 3 cut(s) 116, 464, 3170
BpmI CTGGAG 3 cut(s) 21, 660, 1020
Bpu10I CCTNAGC 2 cut(s) 356, 2039
Bpu1102I GCTNAGC 1 cut(s) 3539
BpuEI CTTGAG 5 cut(s) 533, 893, 1699, 2079, 2096
BsaAI YACGTR 1 cut(s) 4136
BsaBI GATNNNNATC 1 cut(s) 867
BsaI GGTCTC 1 cut(s) 1617
BsaJI CCNNGG 3 cut(s) 1590, 1720, 2179
BsaWI WCCGGW 1 cut(s) 270
Bsc4I CCNNNNNNNGG 9 cut(s) 683, 715, 827, 1043, 1115, 1259, 1403, 2462, 3178
Bse118I RCCGGY 1 cut(s) 3955
Bse1I ACTGG 8 cut(s) 241, 451, 739, 1323, 2139, 2446, 2806, 3644
Bse3DI GCAATG 5 cut(s) 232, 1602, 2473, 2993, 3540
Bse8I GATNNNNATC 1 cut(s) 867
BseBI CCWGG 5 cut(s) 181, 195, 710, 1070, 3882
BseDI CCNNGG 3 cut(s) 1590, 1720, 2179
BseJI GATNNNNATC 1 cut(s) 867
BseLI CCNNNNNNNGG 9 cut(s) 683, 715, 827, 1043, 1115, 1259, 1403, 2462, 3178
BseMI GCAATG 5 cut(s) 232, 1602, 2473, 2993, 3540
BseNI ACTGG 8 cut(s) 241, 451, 739, 1323, 2139, 2446, 2806, 3644
BseRI GAGGAG 1 cut(s) 4088
BseSI GKGCMC 2 cut(s) 1677, 3427
BseXI GCAGC 4 cut(s) 51, 2055, 3112, 3119
BseYI CCCAGC 1 cut(s) 1178
BsgI GTGCAG 2 cut(s) 479, 839
BshFI GGCC 7 cut(s) 543, 831, 903, 1170, 1314, 1962, 3701
BshNI GGYRCC 3 cut(s) 665, 1025, 3787
BsiHKAI GWGCWC 1 cut(s) 3798
BsiSI CCGG 3 cut(s) 271, 962, 3956
BslFI GGGAC 7 cut(s) 463, 723, 1083, 2406, 2530, 2842, 3671
BslI CCNNNNNNNGG 9 cut(s) 683, 715, 827, 1043, 1115, 1259, 1403, 2462, 3178
BsmAI GTCTC 5 cut(s) 558, 803, 1494, 1617, 2383
BsmFI GGGAC 7 cut(s) 463, 723, 1083, 2406, 2530, 2842, 3671
BsnI GGCC 7 cut(s) 543, 831, 903, 1170, 1314, 1962, 3701
Bso31I GGTCTC 1 cut(s) 1617
Bsp1286I GDGCHC 3 cut(s) 1677, 3427, 3798
Bsp1407I TGTACA 1 cut(s) 3649
Bsp1720I GCTNAGC 1 cut(s) 3539
Bsp19I CCATGG 1 cut(s) 1720
BspACI CCGC 2 cut(s) 198, 1394
BspANI GGCC 7 cut(s) 543, 831, 903, 1170, 1314, 1962, 3701
BspHI TCATGA 3 cut(s) 2064, 3550, 3559
BspLI GGNNCC 7 cut(s) 667, 739, 1027, 1099, 2014, 2288, 3789
BspPI GGATC 4 cut(s) 697, 1057, 1465, 2194
BspT107I GGYRCC 3 cut(s) 665, 1025, 3787
BspTI CTTAAG 4 cut(s) 1267, 1411, 1885, 2119
BspTNI GGTCTC 1 cut(s) 1617
BsrDI GCAATG 5 cut(s) 232, 1602, 2473, 2993, 3540
BsrFI RCCGGY 1 cut(s) 3955
BsrGI TGTACA 1 cut(s) 3649
BsrI ACTGG 8 cut(s) 241, 451, 739, 1323, 2139, 2446, 2806, 3644
BssAI RCCGGY 1 cut(s) 3955
BssECI CCNNGG 3 cut(s) 1590, 1720, 2179
BssNAI GTATAC 4 cut(s) 296, 1536, 1693, 3319
BssT1I CCWWGG 3 cut(s) 1590, 1720, 2179
Bst1107I GTATAC 4 cut(s) 296, 1536, 1693, 3319
Bst2UI CCWGG 5 cut(s) 181, 195, 710, 1070, 3882
Bst4CI ACNGT 5 cut(s) 1143, 1164, 1984, 2406, 2909
Bst6I CTCTTC 3 cut(s) 1527, 1836, 3105
BstAFI CTTAAG 4 cut(s) 1267, 1411, 1885, 2119
BstAPI GCANNNNNTGC 1 cut(s) 3113
BstAUI TGTACA 1 cut(s) 3649
BstBAI YACGTR 1 cut(s) 4136
BstC8I GCNNGC 6 cut(s) 142, 2903, 3638, 3769, 3798, 4045
BstDSI CCRYGG 1 cut(s) 1720
BstEII GGTNACC 1 cut(s) 2033
BstHHI GCGC 1 cut(s) 3981
BstMAI GTCTC 5 cut(s) 558, 803, 1494, 1617, 2383
BstMWI GCNNNNNNNGC 4 cut(s) 3018, 3113, 3122, 3134
BstNI CCWGG 5 cut(s) 181, 195, 710, 1070, 3882
BstNSI RCATGY 2 cut(s) 2905, 4047
BstPI GGTNACC 1 cut(s) 2033
BstSCI CCNGG 5 cut(s) 179, 193, 708, 1068, 3880
BstSFI CTRYAG 1 cut(s) 3835
BstSLI GKGCMC 2 cut(s) 1677, 3427
BstSNI TACGTA 1 cut(s) 4136
BstV1I GCAGC 4 cut(s) 51, 2055, 3112, 3119
BstV2I GAAGAC 3 cut(s) 116, 464, 3170
BstX2I RGATCY 4 cut(s) 5, 1457, 1682, 2186
BstXI CCANNNNNNTGG 2 cut(s) 734, 2081
BstYI RGATCY 4 cut(s) 5, 1457, 1682, 2186
BstZ17I GTATAC 4 cut(s) 296, 1536, 1693, 3319
BsuRI GGCC 7 cut(s) 543, 831, 903, 1170, 1314, 1962, 3701
BtgI CCRYGG 1 cut(s) 1720
BtsI GCAGTG 3 cut(s) 3385, 3550, 3720
BtsIMutI CAGTG 5 cut(s) 1330, 3385, 3429, 3550, 3720
Cac8I GCNNGC 6 cut(s) 142, 2903, 3638, 3769, 3798, 4045
CaiI CAGNNNCTG 2 cut(s) 1213, 1357
CciI TCATGA 3 cut(s) 2064, 3550, 3559
CfoI GCGC 1 cut(s) 3981
Cfr10I RCCGGY 1 cut(s) 3955
Cfr13I GGNCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
CseI GACGC 1 cut(s) 3175
CsiI ACCWGGT 2 cut(s) 708, 1068
Csp6I GTAC 5 cut(s) 303, 1797, 2256, 2486, 3650
CspCI CAANNNNNGTGG 2 cut(s) 2011, 2046
CviQI GTAC 5 cut(s) 303, 1797, 2256, 2486, 3650
Eam1104I CTCTTC 3 cut(s) 1527, 1836, 3105
EarI CTCTTC 3 cut(s) 1527, 1836, 3105
EciI GGCGGA 1 cut(s) 213
Ecl136II GAGCTC 1 cut(s) 3796
Eco105I TACGTA 1 cut(s) 4136
Eco130I CCWWGG 3 cut(s) 1590, 1720, 2179
Eco147I AGGCCT 1 cut(s) 3701
Eco24I GRGCYC 1 cut(s) 3798
Eco31I GGTCTC 1 cut(s) 1617
Eco32I GATATC 1 cut(s) 3889
Eco47I GGWCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
Eco53kI GAGCTC 1 cut(s) 3796
Eco57I CTGAAG 3 cut(s) 132, 1334, 2302
Eco91I GGTNACC 1 cut(s) 2033
EcoICRI GAGCTC 1 cut(s) 3796
EcoO109I RGGNCCY 1 cut(s) 1097
EcoO65I GGTNACC 1 cut(s) 2033
EcoRI GAATTC 4 cut(s) 2106, 2736, 3404, 4051
EcoRII CCWGG 5 cut(s) 179, 193, 708, 1068, 3880
EcoRV GATATC 1 cut(s) 3889
EcoT14I CCWWGG 3 cut(s) 1590, 1720, 2179
EcoT38I GRGCYC 1 cut(s) 3798
ErhI CCWWGG 3 cut(s) 1590, 1720, 2179
FalI AAGNNNNNCTT 6 cut(s) 2348, 2380, 2937, 2969, 3392, 3424
FaqI GGGAC 7 cut(s) 463, 723, 1083, 2406, 2530, 2842, 3671
FauNDI CATATG 1 cut(s) 3775
FbaI TGATCA 3 cut(s) 753, 801, 3547
FblI GTMKAC 5 cut(s) 295, 1535, 1692, 2922, 3318
Fnu4HI GCNGC 4 cut(s) 65, 2044, 3108, 3126
FriOI GRGCYC 1 cut(s) 3798
Fsp4HI GCNGC 4 cut(s) 65, 2044, 3108, 3126
GlaI GCGC 1 cut(s) 3980
GluI GCNGC 4 cut(s) 65, 2044, 3108, 3126
GsaI CCCAGC 1 cut(s) 1182
GsuI CTGGAG 3 cut(s) 21, 660, 1020
HaeIII GGCC 7 cut(s) 543, 831, 903, 1170, 1314, 1962, 3701
HapII CCGG 3 cut(s) 271, 962, 3956
HgaI GACGC 1 cut(s) 3175
HhaI GCGC 1 cut(s) 3981
Hin6I GCGC 1 cut(s) 3979
HinP1I GCGC 1 cut(s) 3979
HincII GTYRAC 3 cut(s) 352, 2544, 2923
HindII GTYRAC 3 cut(s) 352, 2544, 2923
HindIII AAGCTT 6 cut(s) 1504, 1643, 1787, 1931, 2242, 3458
HpaII CCGG 3 cut(s) 271, 962, 3956
Hpy99I CGWCG 1 cut(s) 2924
HpyCH4III ACNGT 5 cut(s) 1143, 1164, 1984, 2406, 2909
HpyCH4IV ACGT 1 cut(s) 4135
HpyF10VI GCNNNNNNNGC 4 cut(s) 3018, 3113, 3122, 3134
HpySE526I ACGT 1 cut(s) 4135
HspAI GCGC 1 cut(s) 3979
Ksp22I TGATCA 3 cut(s) 753, 801, 3547
LmnI GCTCC 2 cut(s) 2986, 3029
Lsp1109I GCAGC 4 cut(s) 51, 2055, 3112, 3119
LweI GCATC 9 cut(s) 853, 945, 1200, 2968, 3300, 3426, 3886, 3905, 3923
MabI ACCWGGT 2 cut(s) 708, 1068
MaeII ACGT 1 cut(s) 4135
MfeI CAATTG 3 cut(s) 2291, 2386, 3138
MflI RGATCY 4 cut(s) 5, 1457, 1682, 2186
MhlI GDGCHC 3 cut(s) 1677, 3427, 3798
MlyI GAGTC 5 cut(s) 210, 1710, 2265, 2669, 3737
MmeI TCCRAC 2 cut(s) 1384, 4097
MroXI GAANNNNTTC 6 cut(s) 123, 368, 1292, 2363, 2736, 3404
MslI CAYNNNNRTG 9 cut(s) 501, 861, 986, 1208, 1982, 3174, 3312, 3434, 4042
MspA1I CMGCKG 1 cut(s) 64
MspCI CTTAAG 4 cut(s) 1267, 1411, 1885, 2119
MspI CCGG 3 cut(s) 271, 962, 3956
MspR9I CCNGG 5 cut(s) 181, 195, 710, 1070, 3882
MunI CAATTG 3 cut(s) 2291, 2386, 3138
MvaI CCWGG 5 cut(s) 181, 195, 710, 1070, 3882
MwoI GCNNNNNNNGC 4 cut(s) 3018, 3113, 3122, 3134
NcoI CCATGG 1 cut(s) 1720
NdeI CATATG 1 cut(s) 3775
NlaIV GGNNCC 7 cut(s) 667, 739, 1027, 1099, 2014, 2288, 3789
NmuCI GTSAC 6 cut(s) 202, 1367, 2033, 2681, 2786, 3526
NspI RCATGY 2 cut(s) 2905, 4047
OliI CACNNNNGTG 1 cut(s) 1982
PaeI GCATGC 2 cut(s) 2905, 4047
PagI TCATGA 3 cut(s) 2064, 3550, 3559
PceI AGGCCT 1 cut(s) 3701
PdmI GAANNNNTTC 6 cut(s) 123, 368, 1292, 2363, 2736, 3404
PflFI GACNNNGTC 2 cut(s) 1847, 2274
PflMI CCANNNNNTGG 3 cut(s) 827, 1115, 1403
PfoI TCCNGGA 2 cut(s) 179, 3880
PkrI GCNGC 4 cut(s) 66, 2045, 3109, 3127
PleI GAGTC 5 cut(s) 209, 1710, 2265, 2668, 3737
PpsI GAGTC 5 cut(s) 209, 1710, 2265, 2668, 3737
Ppu21I YACGTR 1 cut(s) 4136
PpuMI RGGWCCY 1 cut(s) 1097
PsiI TTATAA 2 cut(s) 18, 795
Psp124BI GAGCTC 1 cut(s) 3798
Psp5II RGGWCCY 1 cut(s) 1097
Psp6I CCWGG 5 cut(s) 179, 193, 708, 1068, 3880
PspEI GGTNACC 1 cut(s) 2033
PspFI CCCAGC 1 cut(s) 1178
PspGI CCWGG 5 cut(s) 179, 193, 708, 1068, 3880
PspN4I GGNNCC 7 cut(s) 667, 739, 1027, 1099, 2014, 2288, 3789
PspPI GGNCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
PspPPI RGGWCCY 1 cut(s) 1097
PstNI CAGNNNCTG 2 cut(s) 1213, 1357
PsuI RGATCY 4 cut(s) 5, 1457, 1682, 2186
PsyI GACNNNGTC 2 cut(s) 1847, 2274
PvuII CAGCTG 1 cut(s) 64
RsaI GTAC 5 cut(s) 304, 1798, 2257, 2487, 3651
RsaNI GTAC 5 cut(s) 303, 1797, 2256, 2486, 3650
RseI CAYNNNNRTG 9 cut(s) 501, 861, 986, 1208, 1982, 3174, 3312, 3434, 4042
SacI GAGCTC 1 cut(s) 3798
SalI GTCGAC 1 cut(s) 2921
SatI GCNGC 4 cut(s) 65, 2044, 3108, 3126
Sau96I GGNCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
SchI GAGTC 5 cut(s) 210, 1710, 2265, 2669, 3737
ScrFI CCNGG 5 cut(s) 181, 195, 710, 1070, 3882
SduI GDGCHC 3 cut(s) 1677, 3427, 3798
SexAI ACCWGGT 2 cut(s) 708, 1068
SfaNI GCATC 9 cut(s) 853, 945, 1200, 2968, 3300, 3426, 3886, 3905, 3923
SfcI CTRYAG 1 cut(s) 3835
SinI GGWCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
SmiMI CAYNNNNRTG 9 cut(s) 501, 861, 986, 1208, 1982, 3174, 3312, 3434, 4042
SmlI CTYRAG 9 cut(s) 548, 908, 1267, 1411, 1678, 1885, 2094, 2111, 2119
SmoI CTYRAG 9 cut(s) 548, 908, 1267, 1411, 1678, 1885, 2094, 2111, 2119
SnaBI TACGTA 1 cut(s) 4136
SphI GCATGC 2 cut(s) 2905, 4047
SseBI AGGCCT 1 cut(s) 3701
SsiI CCGC 2 cut(s) 198, 1394
SspI AATATT 1 cut(s) 3589
SstI GAGCTC 1 cut(s) 3798
StuI AGGCCT 1 cut(s) 3701
StyD4I CCNGG 5 cut(s) 179, 193, 708, 1068, 3880
StyI CCWWGG 3 cut(s) 1590, 1720, 2179
TaaI ACNGT 5 cut(s) 1143, 1164, 1984, 2406, 2909
TaiI ACGT 1 cut(s) 4138
TaqI TCGA 9 cut(s) 154, 1525, 1714, 1770, 2490, 2663, 2922, 3445, 3665
TatI WGTACW 2 cut(s) 2485, 3649
TscAI CASTG 5 cut(s) 1330, 3385, 3436, 3550, 3727
TseFI GTSAC 6 cut(s) 202, 1367, 2033, 2681, 2786, 3526
TseI GCWGC 4 cut(s) 64, 2043, 3107, 3125
Tsp45I GTSAC 6 cut(s) 202, 1367, 2033, 2681, 2786, 3526
TspGWI ACGGA 3 cut(s) 1904, 2264, 2908
TspRI CASTG 5 cut(s) 1330, 3385, 3436, 3550, 3727
Tth111I GACNNNGTC 2 cut(s) 1847, 2274
Van91I CCANNNNNTGG 3 cut(s) 827, 1115, 1403
Vha464I CTTAAG 4 cut(s) 1267, 1411, 1885, 2119
VpaK11BI GGWCC 8 cut(s) 737, 1097, 1241, 1385, 2228, 2588, 2948, 3973
XbaI TCTAGA 6 cut(s) 586, 946, 1492, 1840, 3059, 3511
XceI RCATGY 2 cut(s) 2905, 4047
XcmI CCANNNNNNNNNTGG 2 cut(s) 228, 1432
XmiI GTMKAC 5 cut(s) 295, 1535, 1692, 2922, 3318
XmnI GAANNNNTTC 6 cut(s) 123, 368, 1292, 2363, 2736, 3404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.