RLG00000003036

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
N/A
Physical Location & Seq
Forward (+)
43461748 .. 43467803
6056 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003036

Sequence Viewer

Length: 1455 bp
ATGCCACATACGGATCAGTACGTACAACAACACCCTCTTCTGCAACTTTTTCTTGTGGGTCAGGACCTGGATGGTGTGAACAACTTATGTTTCAGACTTCAAAGCTTTAATTTCCACTATTTTAATCTGGGTCAGAATTACCTTGGTGGCTCAATTCCACCAGAACGGGGTTCTTCCAAGTTGGAATTTCTGGCCTTGGAAAGCAACTTATTTTCTGGAAGTATTTCGCCAAAGATGGGAAGATTGATTAACATGGAAGTCCTCTACCTTCGAGCTAACAATCTCACTGGACAGTTGCCTGTGGTTCTCACTAATATGACCAAATTAAAAACACTTTGGATTGGCAGTAACAACTTCACTGGAAAAATACTGAACTATTTTCTTAGTTGGAAAGAACTTCGGAGAGTAATCAGTGACTTAAGCAGAGAGAGCTCAGCTTTTCCAAACTTGTCGAAGATGAAAAACATGCAGAAATTGATGTTAAGGAGCCGCAATATGACAGGATCAATTCCAGGATATACCTCTAACACGACAAGCCTGCAATTATTAGGGTTGGCCACAATATATCTGACAAATAACTGTCTTACCGGGCTTCTGCAGTGGATAAAAAATAGAGATAGCCGCTATAATGTATTCAAAAGTTTTCCAGACAGAACAACTCGTAAAATTCTCTGCCATTGCCTCTATCCATGTTCAAGAGCACCATGGGAAGCCTCGGAAGGTGGAGCAAAGTTTTTTCAAGACACAGATAATTGGGGATTCAGTAGCACCGGTGATTCTGGGATTATGAATTTTGACCAAGCCTACATAGCAAACAATATTTCCGTACTTAAAATGAACAACTCGGAATTGTACAGAACTGCCCGACTTTCTTTTCTTTCTCTCGAAAAACTGGTATTGAAGGACTGTAATATTGAAAAGGAAGCACCGGGGGTTGTGATTGAAGTATTTAAAGCAGTTGTCAACGTTAGCACTTTAGAGATCCGTTTTTGTTGGGCTGGGAAAGGGACAACTAATGCCCCAATGCGAGGGACATATGGTTCTCTTACAGCAGCTATCTCAGTTGAGTCTGATTTCAAGCTGCCTGGTGATAGCAACAGGAAAATATTCATAGTGGTTGGAGTTGCTTTAGTCTTCTTCATGGGGGAATTATTAGATGGTACAACAATTGCTGTTAAGCAACTTTCTTCAAAATCAAAACAAGGAAATCGTGAGTTTGTGAATGAAATAGGGATGATTTCTGGTTCTGGTTTGCAACATCCAAATCTCGTCCACAAGAAGGCCCTTGTTCTGCAACAAAAAGAAAATCTGATGGAGCTAGTGGATCCAAAGTTGGGATCCGAGTTCAACAAGGAAGAAGCAATGAGAATGATGAAAGTAGCACTGCTCTGCACTAATCCATCTCCAGCACTGAGACCTACAATGTCTGCAGCACTAAGCATGCTTGAAGGCTAA

Protein Analysis

485

Amino Acids

54.06

Weight (kDa)

9.28

Isoelectric Point (pI)

37.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 490, 622
AclI AACGTT 1 cut(s) 966
AclWI GGATC 7 cut(s) 21, 511, 976, 1319, 1332, 1332, 1345
AcoI YGGCCR 1 cut(s) 555
AcsI RAATTY 3 cut(s) 185, 666, 790
AfaI GTAC 5 cut(s) 20, 24, 828, 854, 1162
AfiI CCNNNNNNNGG 5 cut(s) 167, 236, 1028, 1279, 1334
AflII CTTAAG 1 cut(s) 418
AgeI ACCGGT 1 cut(s) 770
AjnI CCWGG 3 cut(s) 66, 511, 1084
AloI GAACNNNNNNTCC 2 cut(s) 1024, 1056
AluBI AGCT 7 cut(s) 105, 275, 432, 437, 1055, 1081, 1318
AluI AGCT 7 cut(s) 105, 275, 432, 437, 1055, 1081, 1318
Alw21I GWGCWC 2 cut(s) 434, 703
Alw26I GTCTC 1 cut(s) 1408
AlwI GGATC 7 cut(s) 21, 511, 976, 1319, 1332, 1332, 1345
AlwNI CAGNNNCTG 1 cut(s) 67
AoxI GGCC 3 cut(s) 192, 555, 1281
ApeKI GCWGC 3 cut(s) 1052, 1081, 1430
ApoI RAATTY 3 cut(s) 185, 666, 790
AsiGI ACCGGT 1 cut(s) 770
Asp700I GAANNNNTTC 2 cut(s) 223, 1106
AspS9I GGNCC 2 cut(s) 64, 1282
AsuC2I CCSGG 2 cut(s) 589, 930
AsuHPI GGTGA 2 cut(s) 785, 1100
AvaII GGWCC 1 cut(s) 64
BalI TGGCCA 1 cut(s) 557
BamHI GGATCC 2 cut(s) 1324, 1337
BanII GRGCYC 1 cut(s) 434
BbsI GAAGAC 1 cut(s) 1126
Bbv12I GWGCWC 2 cut(s) 434, 703
BbvI GCAGC 3 cut(s) 1064, 1068, 1442
BccI CCATC 5 cut(s) 65, 229, 1151, 1306, 1408
BcgI CGANNNNNNTGC 2 cut(s) 520, 554
BciT130I CCWGG 3 cut(s) 68, 513, 1086
BcnI CCSGG 2 cut(s) 589, 930
BcoDI GTCTC 1 cut(s) 1408
BfaI CTAG 1 cut(s) 1319
BfmI CTRYAG 2 cut(s) 596, 1428
BfrI CTTAAG 1 cut(s) 418
BisI GCNGC 5 cut(s) 490, 622, 1053, 1082, 1431
BlpI GCTNAGC 1 cut(s) 433
BlsI GCNGC 5 cut(s) 491, 623, 1054, 1083, 1432
Bme1390I CCNGG 5 cut(s) 68, 513, 589, 930, 1086
Bme18I GGWCC 1 cut(s) 64
BmgT120I GGNCC 2 cut(s) 64, 1282
BmiI GGNNCC 3 cut(s) 488, 1326, 1339
BmrFI CCNGG 5 cut(s) 68, 513, 589, 930, 1086
BpiI GAAGAC 1 cut(s) 1126
BpmI CTGGAG 1 cut(s) 1389
Bpu1102I GCTNAGC 1 cut(s) 433
BpuMI CCSGG 2 cut(s) 589, 930
BsaAI YACGTR 1 cut(s) 22
BsaI GGTCTC 1 cut(s) 1408
BsaJI CCNNGG 5 cut(s) 142, 195, 704, 714, 929
BsaWI WCCGGW 1 cut(s) 770
Bsc4I CCNNNNNNNGG 5 cut(s) 167, 236, 1028, 1279, 1334
Bse118I RCCGGY 1 cut(s) 770
Bse1I ACTGG 3 cut(s) 292, 364, 897
Bse3DI GCAATG 2 cut(s) 676, 1368
BseBI CCWGG 3 cut(s) 68, 513, 1086
BseDI CCNNGG 5 cut(s) 142, 195, 704, 714, 929
BseGI GGATG 3 cut(s) 76, 1239, 1258
BseLI CCNNNNNNNGG 5 cut(s) 167, 236, 1028, 1279, 1334
BseMI GCAATG 2 cut(s) 676, 1368
BseMII CTCAG 3 cut(s) 447, 1074, 1403
BseNI ACTGG 3 cut(s) 292, 364, 897
BseXI GCAGC 3 cut(s) 1064, 1068, 1442
BseYI CCCAGC 1 cut(s) 998
BsgI GTGCAG 1 cut(s) 1375
BshFI GGCC 3 cut(s) 194, 557, 1283
BshTI ACCGGT 1 cut(s) 770
BsiHKAI GWGCWC 2 cut(s) 434, 703
BsiSI CCGG 3 cut(s) 588, 771, 929
BslFI GGGAC 2 cut(s) 1021, 1045
BslI CCNNNNNNNGG 5 cut(s) 167, 236, 1028, 1279, 1334
BsmAI GTCTC 1 cut(s) 1408
BsmFI GGGAC 2 cut(s) 1021, 1045
BsnI GGCC 3 cut(s) 194, 557, 1283
Bso31I GGTCTC 1 cut(s) 1408
Bsp1286I GDGCHC 2 cut(s) 434, 703
Bsp1407I TGTACA 1 cut(s) 852
Bsp143I GATC 5 cut(s) 13, 503, 981, 1324, 1337
Bsp1720I GCTNAGC 1 cut(s) 433
Bsp19I CCATGG 1 cut(s) 704
BspACI CCGC 2 cut(s) 490, 622
BspANI GGCC 3 cut(s) 194, 557, 1283
BspCNI CTCAG 3 cut(s) 446, 1073, 1404
BspLI GGNNCC 3 cut(s) 488, 1326, 1339
BspMAI CTGCAG 2 cut(s) 600, 1432
BspPI GGATC 7 cut(s) 21, 511, 976, 1319, 1332, 1332, 1345
BspTI CTTAAG 1 cut(s) 418
BspTNI GGTCTC 1 cut(s) 1408
BsrDI GCAATG 2 cut(s) 676, 1368
BsrFI RCCGGY 1 cut(s) 770
BsrGI TGTACA 1 cut(s) 852
BsrI ACTGG 3 cut(s) 292, 364, 897
BssAI RCCGGY 1 cut(s) 770
BssECI CCNNGG 5 cut(s) 142, 195, 704, 714, 929
BssMI GATC 5 cut(s) 13, 503, 981, 1324, 1337
BssT1I CCWWGG 3 cut(s) 142, 195, 704
Bst2UI CCWGG 3 cut(s) 68, 513, 1086
Bst4CI ACNGT 3 cut(s) 294, 581, 908
Bst6I CTCTTC 1 cut(s) 42
BstAFI CTTAAG 1 cut(s) 418
BstAUI TGTACA 1 cut(s) 852
BstBAI YACGTR 1 cut(s) 22
BstC8I GCNNGC 2 cut(s) 539, 1442
BstDEI CTNAG 5 cut(s) 383, 433, 1060, 1412, 1436
BstDSI CCRYGG 1 cut(s) 704
BstF5I GGATG 3 cut(s) 76, 1239, 1258
BstKTI GATC 5 cut(s) 16, 506, 984, 1327, 1340
BstMAI GTCTC 1 cut(s) 1408
BstMBI GATC 5 cut(s) 13, 503, 981, 1324, 1337
BstMWI GCNNNNNNNGC 2 cut(s) 429, 809
BstNI CCWGG 3 cut(s) 68, 513, 1086
BstNSI RCATGY 2 cut(s) 469, 1444
BstSCI CCNGG 5 cut(s) 66, 511, 587, 928, 1084
BstSFI CTRYAG 2 cut(s) 596, 1428
BstSNI TACGTA 1 cut(s) 22
BstV1I GCAGC 3 cut(s) 1064, 1068, 1442
BstV2I GAAGAC 1 cut(s) 1126
BstX2I RGATCY 3 cut(s) 981, 1324, 1337
BstYI RGATCY 3 cut(s) 981, 1324, 1337
BsuRI GGCC 3 cut(s) 194, 557, 1283
BtgI CCRYGG 1 cut(s) 704
BtsCI GGATG 3 cut(s) 76, 1239, 1258
BtsI GCAGTG 2 cut(s) 605, 1382
BtsIMutI CAGTG 6 cut(s) 285, 357, 418, 605, 1382, 1409
Cac8I GCNNGC 2 cut(s) 539, 1442
CaiI CAGNNNCTG 1 cut(s) 67
Cfr10I RCCGGY 1 cut(s) 770
Cfr13I GGNCC 2 cut(s) 64, 1282
Csp6I GTAC 5 cut(s) 19, 23, 827, 853, 1161
CspAI ACCGGT 1 cut(s) 770
CviAII CATG 6 cut(s) 253, 466, 690, 705, 1141, 1441
CviQI GTAC 5 cut(s) 19, 23, 827, 853, 1161
DdeI CTNAG 5 cut(s) 383, 433, 1060, 1412, 1436
DpnI GATC 5 cut(s) 15, 505, 983, 1326, 1339
DpnII GATC 5 cut(s) 13, 503, 981, 1324, 1337
DraI TTTAAA 1 cut(s) 952
EaeI YGGCCR 1 cut(s) 555
Eam1104I CTCTTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 42
Ecl136II GAGCTC 1 cut(s) 432
Eco105I TACGTA 1 cut(s) 22
Eco130I CCWWGG 3 cut(s) 142, 195, 704
Eco24I GRGCYC 1 cut(s) 434
Eco31I GGTCTC 1 cut(s) 1408
Eco47I GGWCC 1 cut(s) 64
Eco53kI GAGCTC 1 cut(s) 432
EcoICRI GAGCTC 1 cut(s) 432
EcoO109I RGGNCCY 2 cut(s) 64, 1282
EcoRII CCWGG 3 cut(s) 66, 511, 1084
EcoT14I CCWWGG 3 cut(s) 142, 195, 704
EcoT38I GRGCYC 1 cut(s) 434
ErhI CCWWGG 3 cut(s) 142, 195, 704
FaeI CATG 6 cut(s) 256, 469, 693, 708, 1144, 1444
FaqI GGGAC 2 cut(s) 1021, 1045
FatI CATG 6 cut(s) 252, 465, 689, 704, 1140, 1440
FauNDI CATATG 1 cut(s) 1036
Fnu4HI GCNGC 5 cut(s) 490, 622, 1053, 1082, 1431
FokI GGATG 3 cut(s) 83, 1245, 1246
FriOI GRGCYC 1 cut(s) 434
Fsp4HI GCNGC 5 cut(s) 490, 622, 1053, 1082, 1431
FspBI CTAG 1 cut(s) 1319
GluI GCNGC 5 cut(s) 490, 622, 1053, 1082, 1431
GsaI CCCAGC 1 cut(s) 1002
GsuI CTGGAG 1 cut(s) 1389
HaeIII GGCC 3 cut(s) 194, 557, 1283
HapII CCGG 3 cut(s) 588, 771, 929
Hin1II CATG 6 cut(s) 256, 469, 693, 708, 1144, 1444
HincII GTYRAC 1 cut(s) 964
HindII GTYRAC 1 cut(s) 964
HindIII AAGCTT 1 cut(s) 103
HinfI GANTC 3 cut(s) 759, 776, 1067
HpaII CCGG 3 cut(s) 588, 771, 929
HphI GGTGA 2 cut(s) 785, 1100
Hpy166II GTNNAC 3 cut(s) 79, 964, 1273
Hpy188I TCNGA 9 cut(s) 95, 135, 402, 570, 718, 847, 1072, 1311, 1342
Hpy188III TCNNGA 7 cut(s) 62, 216, 647, 696, 740, 884, 1211
Hpy8I GTNNAC 3 cut(s) 79, 964, 1273
HpyAV CCTTC 5 cut(s) 278, 713, 895, 1273, 1442
HpyCH4III ACNGT 3 cut(s) 294, 581, 908
HpyCH4IV ACGT 2 cut(s) 21, 966
HpyCH4V TGCA 8 cut(s) 43, 469, 541, 598, 1255, 1294, 1392, 1430
HpyF10VI GCNNNNNNNGC 2 cut(s) 429, 809
HpyF3I CTNAG 5 cut(s) 383, 433, 1060, 1412, 1436
HpySE526I ACGT 2 cut(s) 21, 966
Hsp92II CATG 6 cut(s) 256, 469, 693, 708, 1144, 1444
Kzo9I GATC 5 cut(s) 13, 503, 981, 1324, 1337
LmnI GCTCC 3 cut(s) 486, 725, 1315
Lsp1109I GCAGC 3 cut(s) 1064, 1068, 1442
MaeI CTAG 1 cut(s) 1319
MaeII ACGT 2 cut(s) 21, 966
MaeIII GTNAC 2 cut(s) 347, 413
MalI GATC 5 cut(s) 15, 505, 983, 1326, 1339
MboI GATC 5 cut(s) 13, 503, 981, 1324, 1337
MboII GAAGA 8 cut(s) 29, 165, 252, 466, 1126, 1129, 1179, 1367
MfeI CAATTG 1 cut(s) 1167
MflI RGATCY 3 cut(s) 981, 1324, 1337
MhlI GDGCHC 2 cut(s) 434, 703
MlsI TGGCCA 1 cut(s) 557
MluNI TGGCCA 1 cut(s) 557
MlyI GAGTC 1 cut(s) 1076
MmeI TCCRAC 3 cut(s) 162, 368, 1099
MnlI CCTC 6 cut(s) 45, 272, 532, 692, 724, 1022
Mox20I TGGCCA 1 cut(s) 557
MroXI GAANNNNTTC 2 cut(s) 223, 1106
MscI TGGCCA 1 cut(s) 557
MseI TTAA 9 cut(s) 108, 123, 249, 326, 419, 482, 831, 951, 1176
MslI CAYNNNNRTG 1 cut(s) 314
Msp20I TGGCCA 1 cut(s) 557
MspCI CTTAAG 1 cut(s) 418
MspI CCGG 3 cut(s) 588, 771, 929
MspR9I CCNGG 5 cut(s) 68, 513, 589, 930, 1086
MunI CAATTG 1 cut(s) 1167
MvaI CCWGG 3 cut(s) 68, 513, 1086
MwoI GCNNNNNNNGC 2 cut(s) 429, 809
NciI CCSGG 2 cut(s) 589, 930
NcoI CCATGG 1 cut(s) 704
NdeI CATATG 1 cut(s) 1036
NdeII GATC 5 cut(s) 13, 503, 981, 1324, 1337
NlaIII CATG 6 cut(s) 256, 469, 693, 708, 1144, 1444
NlaIV GGNNCC 3 cut(s) 488, 1326, 1339
NmuCI GTSAC 1 cut(s) 413
NspI RCATGY 2 cut(s) 469, 1444
PaeI GCATGC 1 cut(s) 1444
PdmI GAANNNNTTC 2 cut(s) 223, 1106
PfeI GAWTC 2 cut(s) 759, 776
PfoI TCCNGGA 1 cut(s) 511
PinAI ACCGGT 1 cut(s) 770
PkrI GCNGC 5 cut(s) 491, 623, 1054, 1083, 1432
PleI GAGTC 1 cut(s) 1075
PpsI GAGTC 1 cut(s) 1075
Ppu21I YACGTR 1 cut(s) 22
PpuMI RGGWCCY 1 cut(s) 64
Psp124BI GAGCTC 1 cut(s) 434
Psp1406I AACGTT 1 cut(s) 966
Psp5II RGGWCCY 1 cut(s) 64
Psp6I CCWGG 3 cut(s) 66, 511, 1084
PspFI CCCAGC 1 cut(s) 998
PspGI CCWGG 3 cut(s) 66, 511, 1084
PspN4I GGNNCC 3 cut(s) 488, 1326, 1339
PspPI GGNCC 2 cut(s) 64, 1282
PspPPI RGGWCCY 1 cut(s) 64
PstI CTGCAG 2 cut(s) 600, 1432
PstNI CAGNNNCTG 1 cut(s) 67
PsuI RGATCY 3 cut(s) 981, 1324, 1337
RsaI GTAC 5 cut(s) 20, 24, 828, 854, 1162
RsaNI GTAC 5 cut(s) 19, 23, 827, 853, 1161
RseI CAYNNNNRTG 1 cut(s) 314
SacI GAGCTC 1 cut(s) 434
SaqAI TTAA 9 cut(s) 108, 123, 249, 326, 419, 482, 831, 951, 1176
SatI GCNGC 5 cut(s) 490, 622, 1053, 1082, 1431
Sau3AI GATC 5 cut(s) 13, 503, 981, 1324, 1337
Sau96I GGNCC 2 cut(s) 64, 1282
SchI GAGTC 1 cut(s) 1076
ScrFI CCNGG 5 cut(s) 68, 513, 589, 930, 1086
SduI GDGCHC 2 cut(s) 434, 703
SfcI CTRYAG 2 cut(s) 596, 1428
SgrAI CRCCGGYG 1 cut(s) 770
SinI GGWCC 1 cut(s) 64
SmiMI CAYNNNNRTG 1 cut(s) 314
SmlI CTYRAG 1 cut(s) 418
SmoI CTYRAG 1 cut(s) 418
SnaBI TACGTA 1 cut(s) 22
SphI GCATGC 1 cut(s) 1444
SsiI CCGC 2 cut(s) 490, 622
SspI AATATT 3 cut(s) 820, 913, 1107
SspMI CTAG 1 cut(s) 1319
SstI GAGCTC 1 cut(s) 434
StyD4I CCNGG 5 cut(s) 66, 511, 587, 928, 1084
StyI CCWWGG 3 cut(s) 142, 195, 704
TaaI ACNGT 3 cut(s) 294, 581, 908
TaiI ACGT 2 cut(s) 24, 969
TaqI TCGA 3 cut(s) 271, 452, 885
TatI WGTACW 1 cut(s) 852
TauI GCSGC 2 cut(s) 492, 624
TfiI GAWTC 2 cut(s) 759, 776
Tru1I TTAA 9 cut(s) 108, 123, 249, 326, 419, 482, 831, 951, 1176
Tru9I TTAA 9 cut(s) 108, 123, 249, 326, 419, 482, 831, 951, 1176
TscAI CASTG 6 cut(s) 292, 364, 418, 605, 1389, 1416
TseFI GTSAC 1 cut(s) 413
TseI GCWGC 3 cut(s) 1052, 1081, 1430
Tsp45I GTSAC 1 cut(s) 413
TspDTI ATGAA 7 cut(s) 473, 803, 851, 1099, 1129, 1239, 1388
TspGWI ACGGA 3 cut(s) 26, 814, 974
TspRI CASTG 6 cut(s) 292, 364, 418, 605, 1389, 1416
Vha464I CTTAAG 1 cut(s) 418
VpaK11BI GGWCC 1 cut(s) 64
XapI RAATTY 3 cut(s) 185, 666, 790
XceI RCATGY 2 cut(s) 469, 1444
XmnI GAANNNNTTC 2 cut(s) 223, 1106
XspI CTAG 1 cut(s) 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.