RLG00000009198

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
N/A
Physical Location & Seq
Reverse (-)
48685598 .. 48694349
8752 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009198

Sequence Viewer

Length: 1359 bp
ATGACATACGTCAGAGATTCTTCAGAAAACTGTCTCGAAGACTCTTCACAAAGTGACAAAACTCTTTTCAGAGACGATGAAGAAGAACACAATACACAAAAGGGCTTTACCATTGCACAAAAGATAGTGGGTTTTCCTGTTTTTCCATTTGGTTTTGGAGCTCAGAGGATTCATATGACTCATTCTGATCTCCATTTTAAATCTCCCCCAGGAAAGGAAGAGAGAATAGAGGTAGCTGTTGCTTTAGAGAAAGTTGAACTATCTGATCAGTATTTTGTCAAGAGAAAGCTGTATCCAAATGTTGATTTATACTCTGGGTTCAAATATAGGTCCTTATCACACTGCACACATCATGGCAAGTCAATCCAAACAATTGAGAGTCCAGAGAAGTTGGAGGCTGTTGAGAAAAAAACCATCTCGAAATTAAACATCTTCGATCCAGCTGTATATGAGCAAGAAGAGGCAGCAAAAGGATGTTGGGGATTGTGTACTTTTGAAAGGAAGGGTGTACATGTCATTGATTTCAATGACTTTGTTAGATCACTGACTGTCTTCCATCCGAATGCCCCACAAGAAGATAAGATCGATTTTTCATTTAAGCTCTATGACTTGGATAACATGGGTTTATTGAGCGCCAAGAGGCAGAGAAGCTTCCCCCGTTTCCAACTTCATCCTTACCCTCTCATCTCTCTACCTACAATGAAACCAATCATCAGTCCTCTCTACCTCTACTTGTTCCTCCACATCCTCACTCTCTTCGTCACCGGTCAGTCGCCACCATACATCCCGGTCGAAAATATCGCCCTCGCCTGTGGCAATTCCGGCCAACAAAGCTCCAATGACAACAGAAAGTGGAATGGAGATATCGACTCAAAATTCACCCCAATTGGTAACGCATCCAAATCCATAAATGCACCGCCGTCGTCGTCCACCGCTAGCCAAGTCCCTTACACCAAGGCTCGTCTCTCTCGCTCCAGCTTCACTTACACAATTCCCCTCTCTCTAGGCCAAAAATTCATCCGCTTGCATTTCAATCCAGACACATACACCCCGGACTTCCAACGCCCCAACTCCCTCTTCTCCGTCACAGCCGGCGGCTTCACTCTTCTCAAAGACTTCAACGCCTCCGTCACCCCGGTCGCTTCCGGCCAGTCCCCGCTGGTCAGAGAATTCTGTGTAAACATCGAGACAGGACGGAGACTCGAGATCACCTTCACACCAAGCAAAGATGCGTACGCTTTCATCAACGGAATCGAAATCGTGTCCATGCCCACCGGTCTTTACAATACTTCACCCTATCTCATCGGCAGCACAAGCACATATCCGATTGGAAAAGACATAGCTCTGGAGATGGTGTAA

Protein Analysis

453

Amino Acids

50.84

Weight (kDa)

6.87

Isoelectric Point (pI)

50.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Citrate_synt PF00285 70 - 112 4.2e-07 Citrate synthase, C-terminal domain
Malectin_like PF12819 269 - 430 1.1e-10 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 917, 933, 1021, 1095, 1157
AclWI GGATC 1 cut(s) 431
AcoI YGGCCR 2 cut(s) 823, 1147
AcsI RAATTY 3 cut(s) 875, 1013, 1169
AcuI CTGAAG 1 cut(s) 6
AdeI CACNNNGTG 1 cut(s) 53
AfaI GTAC 3 cut(s) 490, 510, 1235
AfiI CCNNNNNNNGG 1 cut(s) 214
AflIII ACRYGT 1 cut(s) 511
AgeI ACCGGT 2 cut(s) 764, 1274
AgsI TTSAA 6 cut(s) 257, 322, 497, 526, 1033, 1120
AjnI CCWGG 1 cut(s) 208
AjuI GAANNNNNNNTTGG 2 cut(s) 1061, 1093
AluBI AGCT 9 cut(s) 161, 236, 289, 443, 601, 651, 834, 978, 1343
AluI AGCT 9 cut(s) 161, 236, 289, 443, 601, 651, 834, 978, 1343
Alw21I GWGCWC 1 cut(s) 163
Alw26I GTCTC 5 cut(s) 38, 66, 968, 1181, 1192
AlwI GGATC 1 cut(s) 431
Ama87I CYCGRG 1 cut(s) 1202
AoxI GGCC 3 cut(s) 823, 1006, 1147
ApeKI GCWGC 2 cut(s) 464, 1308
ApoI RAATTY 3 cut(s) 875, 1013, 1169
AsiGI ACCGGT 2 cut(s) 764, 1274
AspLEI GCGC 1 cut(s) 635
AspS9I GGNCC 1 cut(s) 330
AsuC2I CCSGG 3 cut(s) 788, 1052, 1136
AsuHPI GGTGA 5 cut(s) 754, 871, 1123, 1201, 1284
AsuNHI GCTAGC 1 cut(s) 935
AvaI CYCGRG 1 cut(s) 1202
AvaII GGWCC 1 cut(s) 330
BanII GRGCYC 1 cut(s) 163
BbsI GAAGAC 2 cut(s) 45, 544
Bbv12I GWGCWC 1 cut(s) 163
BbvI GCAGC 2 cut(s) 476, 1320
BccI CCATC 3 cut(s) 422, 564, 1345
BceAI ACGGC 1 cut(s) 904
BcgI CGANNNNNNTGC 2 cut(s) 903, 937
BciT130I CCWGG 1 cut(s) 210
BciVI GTATCC 1 cut(s) 303
BclI TGATCA 1 cut(s) 265
BcnI CCSGG 3 cut(s) 788, 1052, 1136
BcoDI GTCTC 5 cut(s) 38, 66, 968, 1181, 1192
BfaI CTAG 2 cut(s) 936, 1004
BfoI RGCGCY 1 cut(s) 636
BfuI GTATCC 1 cut(s) 303
BisI GCNGC 3 cut(s) 465, 1096, 1309
BlsI GCNGC 3 cut(s) 466, 1097, 1310
Bme1390I CCNGG 4 cut(s) 210, 788, 1052, 1136
Bme18I GGWCC 1 cut(s) 330
BmeT110I CYCGRG 1 cut(s) 1202
BmgT120I GGNCC 1 cut(s) 330
BmrFI CCNGG 4 cut(s) 210, 788, 1052, 1136
BmsI GCATC 2 cut(s) 905, 1219
BmtI GCTAGC 1 cut(s) 939
BoxI GACNNNNGTC 1 cut(s) 8
BpiI GAAGAC 2 cut(s) 45, 544
BpmI CTGGAG 1 cut(s) 958
BpuMI CCSGG 3 cut(s) 788, 1052, 1136
Bsa29I ATCGAT 1 cut(s) 585
BsaJI CCNNGG 4 cut(s) 208, 954, 1050, 1134
BsaWI WCCGGW 2 cut(s) 764, 1274
BsaXI ACNNNNNCTCC 1 cut(s) 1340
Bsc4I CCNNNNNNNGG 1 cut(s) 214
Bse118I RCCGGY 3 cut(s) 764, 1091, 1274
Bse1I ACTGG 1 cut(s) 1150
Bse3DI GCAATG 1 cut(s) 111
BseBI CCWGG 1 cut(s) 210
BseCI ATCGAT 1 cut(s) 585
BseDI CCNNGG 4 cut(s) 208, 954, 1050, 1134
BseGI GGATG 7 cut(s) 479, 556, 670, 744, 783, 896, 1017
BseLI CCNNNNNNNGG 1 cut(s) 214
BseMI GCAATG 1 cut(s) 111
BseMII CTCAG 1 cut(s) 176
BseNI ACTGG 1 cut(s) 1150
BseXI GCAGC 2 cut(s) 476, 1320
BsgI GTGCAG 1 cut(s) 328
Bsh1285I CGRYCG 2 cut(s) 792, 1140
BshFI GGCC 3 cut(s) 825, 1008, 1149
BshTI ACCGGT 2 cut(s) 764, 1274
BshVI ATCGAT 1 cut(s) 585
BsiEI CGRYCG 2 cut(s) 792, 1140
BsiHKAI GWGCWC 1 cut(s) 163
BsiHKCI CYCGRG 1 cut(s) 1202
BsiSI CCGG 8 cut(s) 765, 788, 822, 1052, 1092, 1136, 1146, 1275
BsiWI CGTACG 1 cut(s) 1233
BslFI GGGAC 2 cut(s) 929, 1138
BslI CCNNNNNNNGG 1 cut(s) 214
BsmAI GTCTC 5 cut(s) 38, 66, 968, 1181, 1192
BsmBI CGTCTC 2 cut(s) 66, 968
BsmFI GGGAC 2 cut(s) 929, 1138
BsmI GAATGC 1 cut(s) 568
BsnI GGCC 3 cut(s) 825, 1008, 1149
BsoBI CYCGRG 1 cut(s) 1202
Bsp1286I GDGCHC 1 cut(s) 163
Bsp1407I TGTACA 1 cut(s) 508
Bsp143I GATC 6 cut(s) 187, 265, 436, 539, 582, 1206
BspACI CCGC 5 cut(s) 917, 933, 1021, 1095, 1157
BspANI GGCC 3 cut(s) 825, 1008, 1149
BspCNI CTCAG 1 cut(s) 175
BspDI ATCGAT 1 cut(s) 585
BspOI GCTAGC 1 cut(s) 939
BspPI GGATC 1 cut(s) 431
BsrDI GCAATG 1 cut(s) 111
BsrFI RCCGGY 3 cut(s) 764, 1091, 1274
BsrGI TGTACA 1 cut(s) 508
BsrI ACTGG 1 cut(s) 1150
BssAI RCCGGY 3 cut(s) 764, 1091, 1274
BssECI CCNNGG 4 cut(s) 208, 954, 1050, 1134
BssMI GATC 6 cut(s) 187, 265, 436, 539, 582, 1206
BssT1I CCWWGG 1 cut(s) 954
Bst2UI CCWGG 1 cut(s) 210
Bst4CI ACNGT 2 cut(s) 32, 550
Bst6I CTCTTC 6 cut(s) 49, 213, 453, 761, 1082, 1110
BstAUI TGTACA 1 cut(s) 508
BstC8I GCNNGC 3 cut(s) 937, 1025, 1093
BstDEI CTNAG 1 cut(s) 162
BstF5I GGATG 7 cut(s) 479, 556, 670, 744, 783, 896, 1017
BstH2I RGCGCY 1 cut(s) 636
BstHHI GCGC 1 cut(s) 635
BstKTI GATC 6 cut(s) 190, 268, 439, 542, 585, 1209
BstMAI GTCTC 5 cut(s) 38, 66, 968, 1181, 1192
BstMBI GATC 6 cut(s) 187, 265, 436, 539, 582, 1206
BstMCI CGRYCG 2 cut(s) 792, 1140
BstMWI GCNNNNNNNGC 3 cut(s) 822, 831, 1314
BstNI CCWGG 1 cut(s) 210
BstNSI RCATGY 1 cut(s) 515
BstPAI GACNNNNGTC 1 cut(s) 8
BstSCI CCNGG 4 cut(s) 208, 786, 1050, 1134
BstV1I GCAGC 2 cut(s) 476, 1320
BstV2I GAAGAC 2 cut(s) 45, 544
Bsu15I ATCGAT 1 cut(s) 585
BsuI GTATCC 1 cut(s) 303
BsuRI GGCC 3 cut(s) 825, 1008, 1149
BsuTUI ATCGAT 1 cut(s) 585
BtsCI GGATG 7 cut(s) 479, 556, 670, 744, 783, 896, 1017
BtsI GCAGTG 1 cut(s) 340
BtsIMutI CAGTG 2 cut(s) 340, 542
Cac8I GCNNGC 3 cut(s) 937, 1025, 1093
CfoI GCGC 1 cut(s) 635
Cfr10I RCCGGY 3 cut(s) 764, 1091, 1274
Cfr13I GGNCC 1 cut(s) 330
ClaI ATCGAT 1 cut(s) 585
Csp6I GTAC 3 cut(s) 489, 509, 1234
CspAI ACCGGT 2 cut(s) 764, 1274
CviAII CATG 4 cut(s) 353, 512, 619, 1267
CviQI GTAC 3 cut(s) 489, 509, 1234
DdeI CTNAG 1 cut(s) 162
DpnI GATC 6 cut(s) 189, 267, 438, 541, 584, 1208
DpnII GATC 6 cut(s) 187, 265, 436, 539, 582, 1206
DraI TTTAAA 1 cut(s) 199
DraIII CACNNNGTG 1 cut(s) 53
EaeI YGGCCR 2 cut(s) 823, 1147
Eam1104I CTCTTC 6 cut(s) 49, 213, 453, 761, 1082, 1110
EarI CTCTTC 6 cut(s) 49, 213, 453, 761, 1082, 1110
Ecl136II GAGCTC 1 cut(s) 161
Eco130I CCWWGG 1 cut(s) 954
Eco24I GRGCYC 1 cut(s) 163
Eco32I GATATC 1 cut(s) 865
Eco47I GGWCC 1 cut(s) 330
Eco53kI GAGCTC 1 cut(s) 161
Eco57I CTGAAG 1 cut(s) 6
Eco88I CYCGRG 1 cut(s) 1202
EcoICRI GAGCTC 1 cut(s) 161
EcoO109I RGGNCCY 1 cut(s) 330
EcoRI GAATTC 1 cut(s) 1169
EcoRII CCWGG 1 cut(s) 208
EcoRV GATATC 1 cut(s) 865
EcoT14I CCWWGG 1 cut(s) 954
EcoT38I GRGCYC 1 cut(s) 163
ErhI CCWWGG 1 cut(s) 954
Esp3I CGTCTC 2 cut(s) 66, 968
FaeI CATG 4 cut(s) 356, 515, 622, 1270
FaqI GGGAC 2 cut(s) 929, 1138
FatI CATG 4 cut(s) 352, 511, 618, 1266
FauI CCCGC 1 cut(s) 1164
FauNDI CATATG 1 cut(s) 174
FbaI TGATCA 1 cut(s) 265
Fnu4HI GCNGC 3 cut(s) 465, 1096, 1309
FokI GGATG 7 cut(s) 486, 543, 657, 731, 770, 883, 1004
FriOI GRGCYC 1 cut(s) 163
Fsp4HI GCNGC 3 cut(s) 465, 1096, 1309
FspBI CTAG 2 cut(s) 936, 1004
GlaI GCGC 1 cut(s) 634
GluI GCNGC 3 cut(s) 465, 1096, 1309
GsuI CTGGAG 1 cut(s) 958
HaeII RGCGCY 1 cut(s) 636
HaeIII GGCC 3 cut(s) 825, 1008, 1149
HapII CCGG 8 cut(s) 765, 788, 822, 1052, 1092, 1136, 1146, 1275
HhaI GCGC 1 cut(s) 635
Hin1II CATG 4 cut(s) 356, 515, 622, 1270
Hin6I GCGC 1 cut(s) 633
HinP1I GCGC 1 cut(s) 633
HindIII AAGCTT 1 cut(s) 649
HinfI GANTC 8 cut(s) 17, 41, 169, 178, 379, 869, 1200, 1251
HpaII CCGG 8 cut(s) 765, 788, 822, 1052, 1092, 1136, 1146, 1275
HphI GGTGA 5 cut(s) 754, 871, 1123, 1201, 1284
Hpy166II GTNNAC 4 cut(s) 489, 509, 930, 1180
Hpy188I TCNGA 9 cut(s) 14, 25, 71, 165, 187, 265, 561, 1166, 1326
Hpy188III TCNNGA 8 cut(s) 35, 280, 383, 418, 1037, 1186, 1204, 1346
Hpy8I GTNNAC 4 cut(s) 489, 509, 930, 1180
Hpy99I CGWCG 2 cut(s) 925, 928
HpyAV CCTTC 2 cut(s) 496, 1222
HpyCH4III ACNGT 2 cut(s) 32, 550
HpyCH4IV ACGT 1 cut(s) 9
HpyCH4V TGCA 4 cut(s) 116, 345, 914, 1027
HpyF10VI GCNNNNNNNGC 3 cut(s) 822, 831, 1314
HpyF3I CTNAG 1 cut(s) 162
HpySE526I ACGT 1 cut(s) 9
Hsp92II CATG 4 cut(s) 356, 515, 622, 1270
HspAI GCGC 1 cut(s) 633
KroI GCCGGC 1 cut(s) 1091
KroNI GCCGGC 1 cut(s) 1093
Ksp22I TGATCA 1 cut(s) 265
Kzo9I GATC 6 cut(s) 187, 265, 436, 539, 582, 1206
LmnI GCTCC 3 cut(s) 158, 839, 977
Lsp1109I GCAGC 2 cut(s) 476, 1320
LweI GCATC 2 cut(s) 905, 1219
MaeI CTAG 2 cut(s) 936, 1004
MaeII ACGT 1 cut(s) 9
MaeIII GTNAC 5 cut(s) 53, 760, 890, 1084, 1129
MalI GATC 6 cut(s) 189, 267, 438, 541, 584, 1208
MboI GATC 6 cut(s) 187, 265, 436, 539, 582, 1206
MfeI CAATTG 2 cut(s) 372, 885
MhlI GDGCHC 1 cut(s) 163
MluCI AATT 8 cut(s) 372, 422, 817, 875, 885, 990, 1013, 1169
MlyI GAGTC 5 cut(s) 35, 172, 388, 863, 1194
MmeI TCCRAC 3 cut(s) 372, 688, 1084
MroNI GCCGGC 1 cut(s) 1091
MseI TTAA 3 cut(s) 198, 425, 597
MslI CAYNNNNRTG 1 cut(s) 561
MspA1I CMGCKG 2 cut(s) 443, 1159
MspI CCGG 8 cut(s) 765, 788, 822, 1052, 1092, 1136, 1146, 1275
MspR9I CCNGG 4 cut(s) 210, 788, 1052, 1136
MunI CAATTG 2 cut(s) 372, 885
Mva1269I GAATGC 1 cut(s) 568
MvaI CCWGG 1 cut(s) 210
MwoI GCNNNNNNNGC 3 cut(s) 822, 831, 1314
NaeI GCCGGC 1 cut(s) 1093
NciI CCSGG 3 cut(s) 788, 1052, 1136
NdeI CATATG 1 cut(s) 174
NdeII GATC 6 cut(s) 187, 265, 436, 539, 582, 1206
NgoMIV GCCGGC 1 cut(s) 1091
NheI GCTAGC 1 cut(s) 935
NlaIII CATG 4 cut(s) 356, 515, 622, 1270
NmuCI GTSAC 4 cut(s) 53, 760, 1084, 1129
NspI RCATGY 1 cut(s) 515
PaeR7I CTCGAG 1 cut(s) 1202
PciI ACATGT 1 cut(s) 511
PctI GAATGC 1 cut(s) 568
PdiI GCCGGC 1 cut(s) 1093
PfeI GAWTC 3 cut(s) 17, 169, 1251
Pfl23II CGTACG 1 cut(s) 1233
PinAI ACCGGT 2 cut(s) 764, 1274
PkrI GCNGC 3 cut(s) 466, 1097, 1310
PleI GAGTC 5 cut(s) 35, 172, 387, 863, 1194
PpsI GAGTC 5 cut(s) 35, 172, 387, 863, 1194
PpuMI RGGWCCY 1 cut(s) 330
PscI ACATGT 1 cut(s) 511
PshAI GACNNNNGTC 1 cut(s) 8
Psp124BI GAGCTC 1 cut(s) 163
Psp5II RGGWCCY 1 cut(s) 330
Psp6I CCWGG 1 cut(s) 208
PspGI CCWGG 1 cut(s) 208
PspLI CGTACG 1 cut(s) 1233
PspPI GGNCC 1 cut(s) 330
PspPPI RGGWCCY 1 cut(s) 330
PvuII CAGCTG 1 cut(s) 443
RsaI GTAC 3 cut(s) 490, 510, 1235
RsaNI GTAC 3 cut(s) 489, 509, 1234
RseI CAYNNNNRTG 1 cut(s) 561
SacI GAGCTC 1 cut(s) 163
SaqAI TTAA 3 cut(s) 198, 425, 597
SatI GCNGC 3 cut(s) 465, 1096, 1309
Sau3AI GATC 6 cut(s) 187, 265, 436, 539, 582, 1206
Sau96I GGNCC 1 cut(s) 330
SchI GAGTC 5 cut(s) 35, 172, 388, 863, 1194
ScrFI CCNGG 4 cut(s) 210, 788, 1052, 1136
SduI GDGCHC 1 cut(s) 163
SfaNI GCATC 2 cut(s) 905, 1219
Sfr274I CTCGAG 1 cut(s) 1202
SinI GGWCC 1 cut(s) 330
SlaI CTCGAG 1 cut(s) 1202
SmiMI CAYNNNNRTG 1 cut(s) 561
SmlI CTYRAG 1 cut(s) 1202
SmoI CTYRAG 1 cut(s) 1202
Sse9I AATT 8 cut(s) 372, 422, 817, 875, 885, 990, 1013, 1169
SsiI CCGC 5 cut(s) 917, 933, 1021, 1095, 1157
SspMI CTAG 2 cut(s) 936, 1004
SstI GAGCTC 1 cut(s) 163
StyD4I CCNGG 4 cut(s) 208, 786, 1050, 1134
StyI CCWWGG 1 cut(s) 954
TaaI ACNGT 2 cut(s) 32, 550
TaiI ACGT 1 cut(s) 12
TaqI TCGA 9 cut(s) 36, 419, 435, 585, 792, 867, 1185, 1203, 1254
TasI AATT 8 cut(s) 372, 422, 817, 875, 885, 990, 1013, 1169
TatI WGTACW 2 cut(s) 488, 508
TauI GCSGC 1 cut(s) 1098
TfiI GAWTC 3 cut(s) 17, 169, 1251
Tru1I TTAA 3 cut(s) 198, 425, 597
Tru9I TTAA 3 cut(s) 198, 425, 597
TscAI CASTG 2 cut(s) 347, 549
TseFI GTSAC 4 cut(s) 53, 760, 1084, 1129
TseI GCWGC 2 cut(s) 464, 1308
Tsp45I GTSAC 4 cut(s) 53, 760, 1084, 1129
TspDTI ATGAA 7 cut(s) 93, 161, 582, 659, 716, 1006, 1231
TspGWI ACGGA 4 cut(s) 1072, 1117, 1210, 1263
TspRI CASTG 2 cut(s) 347, 549
VpaK11BI GGWCC 1 cut(s) 330
XapI RAATTY 3 cut(s) 875, 1013, 1169
XceI RCATGY 1 cut(s) 515
XhoI CTCGAG 1 cut(s) 1202
XspI CTAG 2 cut(s) 936, 1004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.