RLG00000012361
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
N/A
Physical Location & Seq
Reverse (-)
17887041 .. 17888405
1365 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012361

Sequence Viewer

Length: 495 bp
ATGCCACCTGTTGGTGTATTTGTACCGACAATTACTAATGATTCAGTTACCATGAGCTTTATGTTTGAGAAGAAAATTAAGAACCTCAACCTCTCCAACAACTCCCTCTCCAGTTCCTTAGACAAAGGTTTGAAAAACTGTAAGCAATTCTGGAGATTGATACTCGCCGGAAACAAATTCACTGGTGAAATTCCGAATCAGAGCAAATCCACCGTTATCTTGACTCTACTGCCCAACCAAACCCACCGTCACCGTTTTGATCGGATTGAGACTGGGAGTGATGACGATGATGACCCTGTCCGGCGAGTCGAGTTGAGGCTGCTCCTCGATTCGAATCTTTGCACCAGTGCCCTGTCAGATCTGCTTGGTGATGCTGTCGGACTTGCTAAGGCGATGTGGCTGGGAGGAACAGTGAGTAGAGGTTGCTACTGGCCCAGCCTGGAGGATCCATTTTCAAAGTTGGGCTCGTCGGAGGAGGAGGAGGACAGAATATAA

Protein Analysis

165

Amino Acids

18.26

Weight (kDa)

5.41

Isoelectric Point (pI)

50.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 11
AclWI GGATC 2 cut(s) 440, 453
AcsI RAATTY 2 cut(s) 176, 189
AfaI GTAC 1 cut(s) 24
AfiI CCNNNNNNNGG 1 cut(s) 11
AgsI TTSAA 2 cut(s) 133, 456
AjnI CCWGG 1 cut(s) 438
AluBI AGCT 1 cut(s) 57
AluI AGCT 1 cut(s) 57
Alw26I GTCTC 1 cut(s) 263
AlwI GGATC 2 cut(s) 440, 453
AoxI GGCC 1 cut(s) 431
ApeKI GCWGC 1 cut(s) 319
ApoI RAATTY 2 cut(s) 176, 189
ArsI GACNNNNNNTTYG 2 cut(s) 232, 264
AspS9I GGNCC 1 cut(s) 432
AsuHPI GGTGA 3 cut(s) 197, 242, 380
AsuII TTCGAA 1 cut(s) 332
BaeGI GKGCMC 1 cut(s) 352
BamHI GGATCC 1 cut(s) 445
BanII GRGCYC 1 cut(s) 467
BbvI GCAGC 1 cut(s) 306
BciT130I CCWGG 1 cut(s) 440
BcoDI GTCTC 1 cut(s) 263
BglII AGATCT 1 cut(s) 358
BisI GCNGC 1 cut(s) 320
BlsI GCNGC 1 cut(s) 321
Bme1390I CCNGG 1 cut(s) 440
BmgT120I GGNCC 1 cut(s) 432
BmiI GGNNCC 1 cut(s) 447
BmrFI CCNGG 1 cut(s) 440
BmrI ACTGGG 1 cut(s) 282
BmsI GCATC 1 cut(s) 361
BmuI ACTGGG 1 cut(s) 282
BpmI CTGGAG 3 cut(s) 94, 172, 461
Bpu10I CCTNAGC 1 cut(s) 387
Bpu14I TTCGAA 1 cut(s) 332
BsaBI GATNNNNATC 1 cut(s) 333
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 396, 426
Bsc4I CCNNNNNNNGG 1 cut(s) 11
Bse1I ACTGG 5 cut(s) 111, 187, 277, 345, 434
Bse8I GATNNNNATC 1 cut(s) 333
BseBI CCWGG 1 cut(s) 440
BseJI GATNNNNATC 1 cut(s) 333
BseLI CCNNNNNNNGG 1 cut(s) 11
BseNI ACTGG 5 cut(s) 111, 187, 277, 345, 434
BseRI GAGGAG 4 cut(s) 314, 488, 491, 494
BseSI GKGCMC 1 cut(s) 352
BseXI GCAGC 1 cut(s) 306
BseYI CCCAGC 2 cut(s) 400, 434
BshFI GGCC 1 cut(s) 433
BsiSI CCGG 2 cut(s) 168, 301
BslI CCNNNNNNNGG 1 cut(s) 11
BsmAI GTCTC 1 cut(s) 263
BsnI GGCC 1 cut(s) 433
Bsp119I TTCGAA 1 cut(s) 332
Bsp1286I GDGCHC 2 cut(s) 352, 467
Bsp143I GATC 3 cut(s) 259, 358, 445
BspANI GGCC 1 cut(s) 433
BspLI GGNNCC 1 cut(s) 447
BspPI GGATC 2 cut(s) 440, 453
BspT104I TTCGAA 1 cut(s) 332
BsrI ACTGG 5 cut(s) 111, 187, 277, 345, 434
BssMI GATC 3 cut(s) 259, 358, 445
Bst2UI CCWGG 1 cut(s) 440
Bst4CI ACNGT 5 cut(s) 140, 214, 248, 254, 412
BstBI TTCGAA 1 cut(s) 332
BstDEI CTNAG 2 cut(s) 118, 387
BstKTI GATC 3 cut(s) 262, 361, 448
BstMAI GTCTC 1 cut(s) 263
BstMBI GATC 3 cut(s) 259, 358, 445
BstNI CCWGG 1 cut(s) 440
BstSCI CCNGG 1 cut(s) 438
BstSLI GKGCMC 1 cut(s) 352
BstV1I GCAGC 1 cut(s) 306
BstX2I RGATCY 2 cut(s) 358, 445
BstYI RGATCY 2 cut(s) 358, 445
BsuRI GGCC 1 cut(s) 433
BtgZI GCGATG 1 cut(s) 407
BtsIMutI CAGTG 3 cut(s) 180, 352, 417
Cfr13I GGNCC 1 cut(s) 432
Csp6I GTAC 1 cut(s) 23
CviAII CATG 1 cut(s) 52
CviJI RGCY 6 cut(s) 57, 319, 400, 433, 438, 465
CviKI_1 RGCY 6 cut(s) 57, 319, 400, 433, 438, 465
CviQI GTAC 1 cut(s) 23
DdeI CTNAG 2 cut(s) 118, 387
DpnI GATC 3 cut(s) 261, 360, 447
DpnII GATC 3 cut(s) 259, 358, 445
Eco24I GRGCYC 1 cut(s) 467
EcoRII CCWGG 1 cut(s) 438
EcoT38I GRGCYC 1 cut(s) 467
FaeI CATG 1 cut(s) 55
FaiI YATR 3 cut(s) 53, 62, 493
FatI CATG 1 cut(s) 51
Fnu4HI GCNGC 1 cut(s) 320
FriOI GRGCYC 1 cut(s) 467
Fsp4HI GCNGC 1 cut(s) 320
GluI GCNGC 1 cut(s) 320
GsaI CCCAGC 2 cut(s) 404, 438
GsuI CTGGAG 3 cut(s) 94, 172, 461
HaeIII GGCC 1 cut(s) 433
HapII CCGG 2 cut(s) 168, 301
Hin1II CATG 1 cut(s) 55
HinfI GANTC 6 cut(s) 41, 196, 223, 306, 329, 334
HpaII CCGG 2 cut(s) 168, 301
HphI GGTGA 3 cut(s) 197, 242, 380
Hpy188I TCNGA 6 cut(s) 195, 201, 264, 358, 380, 472
Hpy188III TCNNGA 2 cut(s) 151, 220
Hpy99I CGWCG 1 cut(s) 472
HpyCH4III ACNGT 5 cut(s) 140, 214, 248, 254, 412
HpyCH4V TGCA 1 cut(s) 342
HpyF3I CTNAG 2 cut(s) 118, 387
Hsp92II CATG 1 cut(s) 55
Kzo9I GATC 3 cut(s) 259, 358, 445
LmnI GCTCC 1 cut(s) 327
Lsp1109I GCAGC 1 cut(s) 306
LweI GCATC 1 cut(s) 361
MaeIII GTNAC 2 cut(s) 46, 248
MalI GATC 3 cut(s) 261, 360, 447
MboI GATC 3 cut(s) 259, 358, 445
MboII GAAGA 1 cut(s) 82
MflI RGATCY 2 cut(s) 358, 445
MhlI GDGCHC 2 cut(s) 352, 467
MluCI AATT 5 cut(s) 30, 75, 146, 176, 189
MlyI GAGTC 2 cut(s) 217, 315
MmeI TCCRAC 3 cut(s) 120, 358, 450
MseI TTAA 1 cut(s) 78
MspI CCGG 2 cut(s) 168, 301
MspR9I CCNGG 1 cut(s) 440
MvaI CCWGG 1 cut(s) 440
NdeII GATC 3 cut(s) 259, 358, 445
NlaIII CATG 1 cut(s) 55
NlaIV GGNNCC 1 cut(s) 447
NmuCI GTSAC 1 cut(s) 248
NspV TTCGAA 1 cut(s) 332
PfeI GAWTC 4 cut(s) 41, 196, 329, 334
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 11
PkrI GCNGC 1 cut(s) 321
PleI GAGTC 2 cut(s) 217, 314
PpsI GAGTC 2 cut(s) 217, 314
Psp6I CCWGG 1 cut(s) 438
PspFI CCCAGC 2 cut(s) 400, 434
PspGI CCWGG 1 cut(s) 438
PspN4I GGNNCC 1 cut(s) 447
PspPI GGNCC 1 cut(s) 432
PsuI RGATCY 2 cut(s) 358, 445
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 1 cut(s) 24
RsaNI GTAC 1 cut(s) 23
SaqAI TTAA 1 cut(s) 78
SatI GCNGC 1 cut(s) 320
Sau3AI GATC 3 cut(s) 259, 358, 445
Sau96I GGNCC 1 cut(s) 432
SchI GAGTC 2 cut(s) 217, 315
ScrFI CCNGG 1 cut(s) 440
SduI GDGCHC 2 cut(s) 352, 467
SetI ASST 6 cut(s) 10, 59, 87, 93, 130, 424
SfaNI GCATC 1 cut(s) 361
SfuI TTCGAA 1 cut(s) 332
Sse9I AATT 5 cut(s) 30, 75, 146, 176, 189
StyD4I CCNGG 1 cut(s) 438
TaaI ACNGT 5 cut(s) 140, 214, 248, 254, 412
TaqI TCGA 3 cut(s) 309, 327, 332
TasI AATT 5 cut(s) 30, 75, 146, 176, 189
TfiI GAWTC 4 cut(s) 41, 196, 329, 334
Tru1I TTAA 1 cut(s) 78
Tru9I TTAA 1 cut(s) 78
TscAI CASTG 3 cut(s) 187, 352, 417
TseFI GTSAC 1 cut(s) 248
TseI GCWGC 1 cut(s) 319
Tsp45I GTSAC 1 cut(s) 248
TspRI CASTG 3 cut(s) 187, 352, 417
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 11
XapI RAATTY 2 cut(s) 176, 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.