RLG00000014060

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
N/A
Physical Location & Seq
Forward (+)
46293974 .. 46296836
2863 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014060

Sequence Viewer

Length: 1467 bp
ATGGCCTTCACCGATGCTGATCCCAAAGATGCTGAATCCAACATTGTTGTATGGTCCACACCTTTGTTAGATGCTACGGTTTCTTCTCTCCAACTTTTAGAAACTGGGAACCTTGTCTTGGTTGATGCTCACAATATGTCACTGTGGGAGAGTTTTGATCACCCTACGGATACCCTTGTCATGGGACAACGATTGCATGTTGGTAAGTCTATAGTTGCAGAAGGCCAGGATGACTATAATCTTACAGTTACCAGAGAGGATCTGGTGCTGCAATGGAAGGGCCAGACTTACTGGAAACTATCCATGGACAGGAGTCACAGGACAGCTATCAAGAGATCAAATATGTCAGTGTCCTTTTATGCAAATGAATGGAACCGATATTCAGCATTAAGAGCACAATTAATTGGTCTGCCGATGTTGATAGGTTGGCACATCCACTCATTTGTGGAAAACTGGGACTATGCAGGAATCAGACATGTACATGTCCAACTGGTTTCTCCTATGATCCTCATAGGTACCCTGATTGTCTGCCAATTGAAGACACAATGTCTCCGCCTTCGCATCACAAGGTGGGGCAAAACCAATGAATATTATTCCTCAATTGTTTATTTGAAGCTGGAAAATGGTATTGACTATTTTTCTAATCAGTTCACTAAGCCTATGAAACTTGGCGCAAGTTTGTCACTATGTCAATCTCTATGCTCTCAAAACTGTACTTGCTTAGCCTTTTCAAGTGGAAAATCTTCAGGTTCTTGTTATCTTATTGAGCAGAATTTAGGCTCTTTCATGTACAGATCTAGTGGCCAGGAAGAACGAATAGGGTACTTAAAAGTGCTAGGGACTTCCTCTGGGCATACGAAAAGTTCTTTCCTGTTAATCGTCATAGTGGTCATGAGAATCATATGGTTGAGAAAGAAAAAGCGTACTAGAGTAAGTTTAGAGGAATGGGATTCATCTTCATCAGCAGAGCTTGAGATATCCTCTATCTCTTGTTTGCCCGTAAGATTTAATTATGAAGAGCTTGTGGCTGCTACTGAAAATTTTAAGACCCAAATTGGCAGTGGTGGCTTTAGTTTCTGCATCCAAGGAAGCCAGTGTTTTCTAGTTTACGAGTATATGAATAGAGGTTCATTGGAGAAGATTCTCTTTGGCAATGGCCCTGTTTTGGATTGGGAGAGATATGGAATAGTGCTTGGAATGGCAAGGGGCCTTGCTTACTTGCACAGCGAATGCGAATCCAAGATCATCCACTGTGACATCAAACCGGAAAACATGCTTTTGCATGATGATTTACAAGTGAAGATATCGGATTTTGGGGTTTCCAATTCGGAACAAAGAATGGTGTACTTCCCACAACTTGCACTCCAAATGCATAAGAAAAGGAGGTATATGGAACTAGTGGACCCCAGGTTAGACGGTCGTGTGAGGAATGAGGAGGTTGAGAAGCTAGTGAGGGTAGCCTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin Pkinase

Protein Analysis

489

Amino Acids

55.64

Weight (kDa)

7.56

Isoelectric Point (pI)

43.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 13 - 69 3.1e-10 D-mannose binding lectin
Pkinase PF00069 359 - 445 6.1e-18 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 359 - 445 7.9e-14 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 515
AccB1I GGYRCC 1 cut(s) 515
AciI CCGC 1 cut(s) 553
AclWI GGATC 3 cut(s) 14, 267, 499
AcoI YGGCCR 1 cut(s) 802
AcsI RAATTY 2 cut(s) 772, 1039
AcuI CTGAAG 1 cut(s) 729
AdeI CACNNNGTG 1 cut(s) 570
AfaI GTAC 7 cut(s) 480, 517, 715, 791, 824, 925, 1346
AfiI CCNNNNNNNGG 4 cut(s) 118, 181, 309, 1165
AflIII ACRYGT 2 cut(s) 475, 481
AgsI TTSAA 3 cut(s) 538, 613, 732
AhdI GACNNNNNGTC 1 cut(s) 546
AhlI ACTAGT 1 cut(s) 1396
AjnI CCWGG 3 cut(s) 225, 804, 1406
AjuI GAANNNNNNNTTGG 2 cut(s) 101, 133
AluBI AGCT 5 cut(s) 326, 616, 970, 1021, 1447
AluI AGCT 5 cut(s) 326, 616, 970, 1021, 1447
Alw21I GWGCWC 1 cut(s) 397
Alw26I GTCTC 1 cut(s) 554
AlwI GGATC 3 cut(s) 14, 267, 499
AoxI GGCC 6 cut(s) 3, 223, 280, 802, 1156, 1207
ApeKI GCWGC 2 cut(s) 268, 1028
ApoI RAATTY 2 cut(s) 772, 1039
AseI ATTAAT 1 cut(s) 401
Asp700I GAANNNNTTC 1 cut(s) 742
Asp718I GGTACC 1 cut(s) 515
AspLEI GCGC 1 cut(s) 674
AspS9I GGNCC 5 cut(s) 54, 280, 1157, 1207, 1402
AsuHPI GGTGA 1 cut(s) 152
AvaII GGWCC 2 cut(s) 54, 1402
BaeI ACNNNNGTAYC 2 cut(s) 162, 195
BalI TGGCCA 1 cut(s) 804
BanI GGYRCC 1 cut(s) 515
BbsI GAAGAC 1 cut(s) 545
Bbv12I GWGCWC 1 cut(s) 397
BbvI GCAGC 2 cut(s) 255, 1015
BciT130I CCWGG 3 cut(s) 227, 806, 1408
BciVI GTATCC 1 cut(s) 163
BclI TGATCA 1 cut(s) 157
BcoDI GTCTC 1 cut(s) 554
BcuI ACTAGT 1 cut(s) 1396
BfaI CTAG 6 cut(s) 798, 836, 927, 1103, 1397, 1448
BfmI CTRYAG 1 cut(s) 210
BfuI GTATCC 1 cut(s) 163
BglII AGATCT 1 cut(s) 794
BisI GCNGC 2 cut(s) 269, 1029
BlpI GCTNAGC 1 cut(s) 721
BlsI GCNGC 2 cut(s) 270, 1030
Bme1390I CCNGG 3 cut(s) 227, 806, 1408
Bme18I GGWCC 2 cut(s) 54, 1402
BmeRI GACNNNNNGTC 1 cut(s) 546
BmgT120I GGNCC 5 cut(s) 54, 280, 1157, 1207, 1402
BmiI GGNNCC 5 cut(s) 110, 374, 517, 1208, 1404
BmrFI CCNGG 3 cut(s) 227, 806, 1408
BmrI ACTGGG 2 cut(s) 114, 463
BmsI GCATC 6 cut(s) 4, 19, 61, 115, 570, 1089
BmuI ACTGGG 2 cut(s) 114, 463
BoxI GACNNNNGTC 1 cut(s) 312
BpiI GAAGAC 1 cut(s) 545
BplI GAGNNNNNCTC 2 cut(s) 965, 997
Bpu1102I GCTNAGC 1 cut(s) 721
BpuEI CTTGAG 1 cut(s) 992
BsaBI GATNNNNATC 1 cut(s) 18
BsaJI CCNNGG 3 cut(s) 303, 1084, 1406
BsaWI WCCGGW 1 cut(s) 1264
BsaXI ACNNNNNCTCC 4 cut(s) 534, 564, 1347, 1377
Bsc4I CCNNNNNNNGG 4 cut(s) 118, 181, 309, 1165
Bse1I ACTGG 5 cut(s) 109, 296, 458, 495, 1093
Bse3DI GCAATG 2 cut(s) 278, 1159
Bse8I GATNNNNATC 1 cut(s) 18
BseBI CCWGG 3 cut(s) 227, 806, 1408
BseDI CCNNGG 3 cut(s) 303, 1084, 1406
BseGI GGATG 4 cut(s) 235, 432, 1080, 1245
BseJI GATNNNNATC 1 cut(s) 18
BseLI CCNNNNNNNGG 4 cut(s) 118, 181, 309, 1165
BseMI GCAATG 2 cut(s) 278, 1159
BseNI ACTGG 5 cut(s) 109, 296, 458, 495, 1093
BseRI GAGGAG 1 cut(s) 1448
BseXI GCAGC 2 cut(s) 255, 1015
Bsh1285I CGRYCG 1 cut(s) 1420
BshFI GGCC 6 cut(s) 5, 225, 282, 804, 1158, 1209
BshNI GGYRCC 1 cut(s) 515
BsiEI CGRYCG 1 cut(s) 1420
BsiHKAI GWGCWC 1 cut(s) 397
BsiSI CCGG 1 cut(s) 1265
BslFI GGGAC 3 cut(s) 198, 470, 853
BslI CCNNNNNNNGG 4 cut(s) 118, 181, 309, 1165
BsmAI GTCTC 1 cut(s) 554
BsmFI GGGAC 3 cut(s) 198, 470, 853
BsmI GAATGC 1 cut(s) 1235
BsnI GGCC 6 cut(s) 5, 225, 282, 804, 1158, 1209
Bsp1286I GDGCHC 1 cut(s) 397
Bsp1407I TGTACA 2 cut(s) 478, 789
Bsp143I GATC 7 cut(s) 19, 157, 259, 335, 504, 794, 1242
Bsp1720I GCTNAGC 1 cut(s) 721
Bsp19I CCATGG 1 cut(s) 303
BspACI CCGC 1 cut(s) 553
BspANI GGCC 6 cut(s) 5, 225, 282, 804, 1158, 1209
BspHI TCATGA 1 cut(s) 891
BspLI GGNNCC 5 cut(s) 110, 374, 517, 1208, 1404
BspPI GGATC 3 cut(s) 14, 267, 499
BspQI GCTCTTC 1 cut(s) 1011
BspT107I GGYRCC 1 cut(s) 515
BsrDI GCAATG 2 cut(s) 278, 1159
BsrGI TGTACA 2 cut(s) 478, 789
BsrI ACTGG 5 cut(s) 109, 296, 458, 495, 1093
BssECI CCNNGG 3 cut(s) 303, 1084, 1406
BssMI GATC 7 cut(s) 19, 157, 259, 335, 504, 794, 1242
BssT1I CCWWGG 2 cut(s) 303, 1084
Bst2UI CCWGG 3 cut(s) 227, 806, 1408
Bst4CI ACNGT 6 cut(s) 79, 144, 247, 713, 1253, 1418
Bst6I CTCTTC 1 cut(s) 1011
BstAUI TGTACA 2 cut(s) 478, 789
BstDEI CTNAG 2 cut(s) 654, 721
BstDSI CCRYGG 1 cut(s) 303
BstF5I GGATG 4 cut(s) 235, 432, 1080, 1245
BstHHI GCGC 1 cut(s) 674
BstKTI GATC 7 cut(s) 22, 160, 262, 338, 507, 797, 1245
BstMAI GTCTC 1 cut(s) 554
BstMBI GATC 7 cut(s) 19, 157, 259, 335, 504, 794, 1242
BstMCI CGRYCG 1 cut(s) 1420
BstMWI GCNNNNNNNGC 2 cut(s) 392, 1065
BstNI CCWGG 3 cut(s) 227, 806, 1408
BstNSI RCATGY 4 cut(s) 200, 479, 485, 1276
BstPAI GACNNNNGTC 1 cut(s) 312
BstSCI CCNGG 3 cut(s) 225, 804, 1406
BstSFI CTRYAG 1 cut(s) 210
BstV1I GCAGC 2 cut(s) 255, 1015
BstV2I GAAGAC 1 cut(s) 545
BstX2I RGATCY 2 cut(s) 259, 794
BstYI RGATCY 2 cut(s) 259, 794
BsuI GTATCC 1 cut(s) 163
BsuRI GGCC 6 cut(s) 5, 225, 282, 804, 1158, 1209
BtgI CCRYGG 1 cut(s) 303
BtsCI GGATG 4 cut(s) 235, 432, 1080, 1245
BtsI GCAGTG 1 cut(s) 1066
BtsIMutI CAGTG 5 cut(s) 140, 354, 1066, 1100, 1249
CciI TCATGA 1 cut(s) 891
CfoI GCGC 1 cut(s) 674
Cfr13I GGNCC 5 cut(s) 54, 280, 1157, 1207, 1402
Csp6I GTAC 7 cut(s) 479, 516, 714, 790, 823, 924, 1345
CviAII CATG 9 cut(s) 181, 197, 304, 476, 482, 787, 892, 1273, 1283
CviQI GTAC 7 cut(s) 479, 516, 714, 790, 823, 924, 1345
DdeI CTNAG 2 cut(s) 654, 721
DpnI GATC 7 cut(s) 21, 159, 261, 337, 506, 796, 1244
DpnII GATC 7 cut(s) 19, 157, 259, 335, 504, 794, 1242
DraIII CACNNNGTG 1 cut(s) 570
DriI GACNNNNNGTC 1 cut(s) 546
EaeI YGGCCR 1 cut(s) 802
Eam1104I CTCTTC 1 cut(s) 1011
Eam1105I GACNNNNNGTC 1 cut(s) 546
EarI CTCTTC 1 cut(s) 1011
EciI GGCGGA 1 cut(s) 542
Eco130I CCWWGG 2 cut(s) 303, 1084
Eco32I GATATC 2 cut(s) 978, 1305
Eco47I GGWCC 2 cut(s) 54, 1402
Eco57I CTGAAG 1 cut(s) 729
EcoO109I RGGNCCY 1 cut(s) 1207
EcoRII CCWGG 3 cut(s) 225, 804, 1406
EcoRV GATATC 2 cut(s) 978, 1305
EcoT14I CCWWGG 2 cut(s) 303, 1084
EcoT22I ATGCAT 1 cut(s) 1374
ErhI CCWWGG 2 cut(s) 303, 1084
FaeI CATG 9 cut(s) 184, 200, 307, 479, 485, 790, 895, 1276, 1286
FalI AAGNNNNNCTT 2 cut(s) 1130, 1162
FaqI GGGAC 3 cut(s) 198, 470, 853
FatI CATG 9 cut(s) 180, 196, 303, 475, 481, 786, 891, 1272, 1282
FauNDI CATATG 1 cut(s) 902
FbaI TGATCA 1 cut(s) 157
Fnu4HI GCNGC 2 cut(s) 269, 1029
FokI GGATG 4 cut(s) 242, 419, 1067, 1232
Fsp4HI GCNGC 2 cut(s) 269, 1029
FspBI CTAG 6 cut(s) 798, 836, 927, 1103, 1397, 1448
GlaI GCGC 1 cut(s) 673
GluI GCNGC 2 cut(s) 269, 1029
HaeIII GGCC 6 cut(s) 5, 225, 282, 804, 1158, 1209
HapII CCGG 1 cut(s) 1265
HhaI GCGC 1 cut(s) 674
Hin1II CATG 9 cut(s) 184, 200, 307, 479, 485, 790, 895, 1276, 1286
Hin6I GCGC 1 cut(s) 672
HinP1I GCGC 1 cut(s) 672
HinfI GANTC 7 cut(s) 35, 313, 468, 897, 950, 1141, 1235
HpaII CCGG 1 cut(s) 1265
HphI GGTGA 1 cut(s) 152
Hpy166II GTNNAC 5 cut(s) 57, 651, 1108, 1345, 1402
Hpy188I TCNGA 3 cut(s) 473, 1309, 1330
Hpy188III TCNNGA 2 cut(s) 331, 892
Hpy8I GTNNAC 5 cut(s) 57, 651, 1108, 1345, 1402
HpyAV CCTTC 4 cut(s) 16, 215, 271, 566
HpyCH4III ACNGT 6 cut(s) 79, 144, 247, 713, 1253, 1418
HpyF10VI GCNNNNNNNGC 2 cut(s) 392, 1065
HpyF3I CTNAG 2 cut(s) 654, 721
Hsp92II CATG 9 cut(s) 184, 200, 307, 479, 485, 790, 895, 1276, 1286
HspAI GCGC 1 cut(s) 672
KpnI GGTACC 1 cut(s) 519
Ksp22I TGATCA 1 cut(s) 157
Kzo9I GATC 7 cut(s) 19, 157, 259, 335, 504, 794, 1242
LguI GCTCTTC 1 cut(s) 1011
Lsp1109I GCAGC 2 cut(s) 255, 1015
LweI GCATC 6 cut(s) 4, 19, 61, 115, 570, 1089
MaeI CTAG 6 cut(s) 798, 836, 927, 1103, 1397, 1448
MaeIII GTNAC 5 cut(s) 138, 247, 314, 681, 1253
MalI GATC 7 cut(s) 21, 159, 261, 337, 506, 796, 1244
MboI GATC 7 cut(s) 19, 157, 259, 335, 504, 794, 1242
MboII GAAGA 8 cut(s) 75, 550, 735, 821, 948, 1028, 1150, 1312
MfeI CAATTG 2 cut(s) 533, 600
MflI RGATCY 2 cut(s) 259, 794
MhlI GDGCHC 1 cut(s) 397
MlsI TGGCCA 1 cut(s) 804
MluCI AATT 9 cut(s) 398, 402, 533, 600, 772, 1009, 1039, 1053, 1324
MluNI TGGCCA 1 cut(s) 804
MlyI GAGTC 1 cut(s) 322
MmeI TCCRAC 3 cut(s) 63, 115, 511
Mox20I TGGCCA 1 cut(s) 804
Mph1103I ATGCAT 1 cut(s) 1374
MroXI GAANNNNTTC 1 cut(s) 742
MscI TGGCCA 1 cut(s) 804
MseI TTAA 6 cut(s) 389, 401, 827, 875, 1008, 1044
MslI CAYNNNNRTG 1 cut(s) 480
Msp20I TGGCCA 1 cut(s) 804
MspI CCGG 1 cut(s) 1265
MspR9I CCNGG 3 cut(s) 227, 806, 1408
MunI CAATTG 2 cut(s) 533, 600
Mva1269I GAATGC 1 cut(s) 1235
MvaI CCWGG 3 cut(s) 227, 806, 1408
MwoI GCNNNNNNNGC 2 cut(s) 392, 1065
NcoI CCATGG 1 cut(s) 303
NdeI CATATG 1 cut(s) 902
NdeII GATC 7 cut(s) 19, 157, 259, 335, 504, 794, 1242
NlaIII CATG 9 cut(s) 184, 200, 307, 479, 485, 790, 895, 1276, 1286
NlaIV GGNNCC 5 cut(s) 110, 374, 517, 1208, 1404
NmuCI GTSAC 4 cut(s) 138, 314, 681, 1253
NsiI ATGCAT 1 cut(s) 1374
NspI RCATGY 4 cut(s) 200, 479, 485, 1276
PagI TCATGA 1 cut(s) 891
PciI ACATGT 2 cut(s) 475, 481
PciSI GCTCTTC 1 cut(s) 1011
PctI GAATGC 1 cut(s) 1235
PdmI GAANNNNTTC 1 cut(s) 742
PfeI GAWTC 6 cut(s) 35, 468, 897, 950, 1141, 1235
PkrI GCNGC 2 cut(s) 270, 1030
PleI GAGTC 1 cut(s) 321
PpsI GAGTC 1 cut(s) 321
PscI ACATGT 2 cut(s) 475, 481
PshAI GACNNNNGTC 1 cut(s) 312
PshBI ATTAAT 1 cut(s) 401
Psp6I CCWGG 3 cut(s) 225, 804, 1406
PspGI CCWGG 3 cut(s) 225, 804, 1406
PspN4I GGNNCC 5 cut(s) 110, 374, 517, 1208, 1404
PspPI GGNCC 5 cut(s) 54, 280, 1157, 1207, 1402
PsuI RGATCY 2 cut(s) 259, 794
RsaI GTAC 7 cut(s) 480, 517, 715, 791, 824, 925, 1346
RsaNI GTAC 7 cut(s) 479, 516, 714, 790, 823, 924, 1345
RseI CAYNNNNRTG 1 cut(s) 480
SapI GCTCTTC 1 cut(s) 1011
SaqAI TTAA 6 cut(s) 389, 401, 827, 875, 1008, 1044
SatI GCNGC 2 cut(s) 269, 1029
Sau3AI GATC 7 cut(s) 19, 157, 259, 335, 504, 794, 1242
Sau96I GGNCC 5 cut(s) 54, 280, 1157, 1207, 1402
SchI GAGTC 1 cut(s) 322
ScrFI CCNGG 3 cut(s) 227, 806, 1408
SduI GDGCHC 1 cut(s) 397
SfaNI GCATC 6 cut(s) 4, 19, 61, 115, 570, 1089
SfcI CTRYAG 1 cut(s) 210
SinI GGWCC 2 cut(s) 54, 1402
SmiMI CAYNNNNRTG 1 cut(s) 480
SmlI CTYRAG 1 cut(s) 971
SmoI CTYRAG 1 cut(s) 971
SpeI ACTAGT 1 cut(s) 1396
Sse9I AATT 9 cut(s) 398, 402, 533, 600, 772, 1009, 1039, 1053, 1324
SsiI CCGC 1 cut(s) 553
SspI AATATT 1 cut(s) 590
SspMI CTAG 6 cut(s) 798, 836, 927, 1103, 1397, 1448
StyD4I CCNGG 3 cut(s) 225, 804, 1406
StyI CCWWGG 2 cut(s) 303, 1084
TaaI ACNGT 6 cut(s) 79, 144, 247, 713, 1253, 1418
TasI AATT 9 cut(s) 398, 402, 533, 600, 772, 1009, 1039, 1053, 1324
TatI WGTACW 4 cut(s) 478, 713, 789, 1344
TfiI GAWTC 6 cut(s) 35, 468, 897, 950, 1141, 1235
Tru1I TTAA 6 cut(s) 389, 401, 827, 875, 1008, 1044
Tru9I TTAA 6 cut(s) 389, 401, 827, 875, 1008, 1044
TscAI CASTG 5 cut(s) 147, 354, 1066, 1100, 1256
TseFI GTSAC 4 cut(s) 138, 314, 681, 1253
TseI GCWGC 2 cut(s) 268, 1028
Tsp45I GTSAC 4 cut(s) 138, 314, 681, 1253
TspDTI ATGAA 9 cut(s) 381, 600, 677, 775, 942, 948, 1029, 1119, 1133
TspGWI ACGGA 1 cut(s) 182
TspRI CASTG 5 cut(s) 147, 354, 1066, 1100, 1256
VpaK11BI GGWCC 2 cut(s) 54, 1402
VspI ATTAAT 1 cut(s) 401
XapI RAATTY 2 cut(s) 772, 1039
XceI RCATGY 4 cut(s) 200, 479, 485, 1276
XcmI CCANNNNNNNNNTGG 2 cut(s) 259, 1058
XmnI GAANNNNTTC 1 cut(s) 742
XspI CTAG 6 cut(s) 798, 836, 927, 1103, 1397, 1448
Zsp2I ATGCAT 1 cut(s) 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.