TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 33 - 82 | 2.9e-11 | Disease resistance protein Roq1-like, winged-helix domain |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 395 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 327 |
| AcsI | RAATTY | 2 cut(s) | 51, 60 |
| AfaI | GTAC | 2 cut(s) | 319, 377 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 327 |
| AgsI | TTSAA | 3 cut(s) | 40, 56, 215 |
| AluBI | AGCT | 3 cut(s) | 283, 358, 398 |
| AluI | AGCT | 3 cut(s) | 283, 358, 398 |
| Ama87I | CYCGRG | 1 cut(s) | 287 |
| AoxI | GGCC | 1 cut(s) | 178 |
| ApeKI | GCWGC | 2 cut(s) | 254, 283 |
| ApoI | RAATTY | 2 cut(s) | 51, 60 |
| AseI | ATTAAT | 1 cut(s) | 201 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 108 |
| AvaI | CYCGRG | 1 cut(s) | 287 |
| BbvI | GCAGC | 2 cut(s) | 266, 270 |
| BccI | CCATC | 1 cut(s) | 26 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 344, 378 |
| BfaI | CTAG | 2 cut(s) | 29, 113 |
| BfuAI | ACCTGC | 1 cut(s) | 395 |
| BisI | GCNGC | 2 cut(s) | 255, 284 |
| BlsI | GCNGC | 2 cut(s) | 256, 285 |
| BmcAI | AGTACT | 1 cut(s) | 377 |
| BmeT110I | CYCGRG | 1 cut(s) | 287 |
| BmsI | GCATC | 2 cut(s) | 70, 352 |
| BpmI | CTGGAG | 1 cut(s) | 392 |
| BsaAI | YACGTR | 1 cut(s) | 154 |
| BsaJI | CCNNGG | 1 cut(s) | 288 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 327 |
| Bse3DI | GCAATG | 1 cut(s) | 117 |
| BseDI | CCNNGG | 1 cut(s) | 288 |
| BseGI | GGATG | 1 cut(s) | 367 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 327 |
| BseMI | GCAATG | 1 cut(s) | 117 |
| BseXI | GCAGC | 2 cut(s) | 266, 270 |
| BshFI | GGCC | 1 cut(s) | 180 |
| BsiHKCI | CYCGRG | 1 cut(s) | 287 |
| BslFI | GGGAC | 1 cut(s) | 205 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 327 |
| BsmFI | GGGAC | 1 cut(s) | 205 |
| BsnI | GGCC | 1 cut(s) | 180 |
| BsoBI | CYCGRG | 1 cut(s) | 287 |
| BspANI | GGCC | 1 cut(s) | 180 |
| BspMI | ACCTGC | 1 cut(s) | 395 |
| BsrDI | GCAATG | 1 cut(s) | 117 |
| BssECI | CCNNGG | 1 cut(s) | 288 |
| Bst4CI | ACNGT | 1 cut(s) | 248 |
| BstBAI | YACGTR | 1 cut(s) | 154 |
| BstF5I | GGATG | 1 cut(s) | 367 |
| BstNSI | RCATGY | 1 cut(s) | 126 |
| BstV1I | GCAGC | 2 cut(s) | 266, 270 |
| BsuRI | GGCC | 1 cut(s) | 180 |
| BtsCI | GGATG | 1 cut(s) | 367 |
| BveI | ACCTGC | 1 cut(s) | 395 |
| Csp6I | GTAC | 2 cut(s) | 318, 376 |
| CviAII | CATG | 2 cut(s) | 15, 123 |
| CviJI | RGCY | 5 cut(s) | 23, 180, 283, 358, 398 |
| CviKI_1 | RGCY | 5 cut(s) | 23, 180, 283, 358, 398 |
| CviQI | GTAC | 2 cut(s) | 318, 376 |
| DraI | TTTAAA | 1 cut(s) | 133 |
| Eco88I | CYCGRG | 1 cut(s) | 287 |
| EcoT22I | ATGCAT | 1 cut(s) | 85 |
| FaeI | CATG | 2 cut(s) | 18, 126 |
| FaiI | YATR | 7 cut(s) | 16, 78, 124, 206, 266, 307, 349 |
| FaqI | GGGAC | 1 cut(s) | 205 |
| FatI | CATG | 2 cut(s) | 14, 122 |
| Fnu4HI | GCNGC | 2 cut(s) | 255, 284 |
| FokI | GGATG | 1 cut(s) | 374 |
| Fsp4HI | GCNGC | 2 cut(s) | 255, 284 |
| FspBI | CTAG | 2 cut(s) | 29, 113 |
| GluI | GCNGC | 2 cut(s) | 255, 284 |
| GsuI | CTGGAG | 1 cut(s) | 392 |
| HaeIII | GGCC | 1 cut(s) | 180 |
| Hin1II | CATG | 2 cut(s) | 18, 126 |
| HinfI | GANTC | 2 cut(s) | 92, 293 |
| Hpy188I | TCNGA | 1 cut(s) | 298 |
| Hpy188III | TCNNGA | 4 cut(s) | 56, 113, 328, 371 |
| HpyAV | CCTTC | 1 cut(s) | 13 |
| HpyCH4III | ACNGT | 1 cut(s) | 248 |
| HpyCH4IV | ACGT | 2 cut(s) | 153, 313 |
| HpyCH4V | TGCA | 3 cut(s) | 83, 98, 122 |
| HpySE526I | ACGT | 2 cut(s) | 153, 313 |
| Hsp92II | CATG | 2 cut(s) | 18, 126 |
| LmnI | GCTCC | 2 cut(s) | 251, 280 |
| LpnPI | CCDG | 5 cut(s) | 60, 162, 313, 344, 356 |
| Lsp1109I | GCAGC | 2 cut(s) | 266, 270 |
| LweI | GCATC | 2 cut(s) | 70, 352 |
| MaeI | CTAG | 2 cut(s) | 29, 113 |
| MaeII | ACGT | 2 cut(s) | 153, 313 |
| MboII | GAAGA | 2 cut(s) | 271, 343 |
| MluCI | AATT | 3 cut(s) | 51, 60, 336 |
| MnlI | CCTC | 3 cut(s) | 191, 233, 283 |
| Mph1103I | ATGCAT | 1 cut(s) | 85 |
| MroXI | GAANNNNTTC | 1 cut(s) | 108 |
| MseI | TTAA | 3 cut(s) | 132, 201, 400 |
| MslI | CAYNNNNRTG | 1 cut(s) | 215 |
| NlaIII | CATG | 2 cut(s) | 18, 126 |
| NsiI | ATGCAT | 1 cut(s) | 85 |
| NspI | RCATGY | 1 cut(s) | 126 |
| PdmI | GAANNNNTTC | 1 cut(s) | 108 |
| PfeI | GAWTC | 2 cut(s) | 92, 293 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 327 |
| PkrI | GCNGC | 2 cut(s) | 256, 285 |
| Ppu21I | YACGTR | 1 cut(s) | 154 |
| PshBI | ATTAAT | 1 cut(s) | 201 |
| RsaI | GTAC | 2 cut(s) | 319, 377 |
| RsaNI | GTAC | 2 cut(s) | 318, 376 |
| RseI | CAYNNNNRTG | 1 cut(s) | 215 |
| SaqAI | TTAA | 3 cut(s) | 132, 201, 400 |
| SatI | GCNGC | 2 cut(s) | 255, 284 |
| ScaI | AGTACT | 1 cut(s) | 377 |
| SfaNI | GCATC | 2 cut(s) | 70, 352 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 215 |
| Sse9I | AATT | 3 cut(s) | 51, 60, 336 |
| SspI | AATATT | 1 cut(s) | 232 |
| SspMI | CTAG | 2 cut(s) | 29, 113 |
| TaaI | ACNGT | 1 cut(s) | 248 |
| TaiI | ACGT | 2 cut(s) | 156, 316 |
| TasI | AATT | 3 cut(s) | 51, 60, 336 |
| TatI | WGTACW | 1 cut(s) | 375 |
| TfiI | GAWTC | 2 cut(s) | 92, 293 |
| Tru1I | TTAA | 3 cut(s) | 132, 201, 400 |
| Tru9I | TTAA | 3 cut(s) | 132, 201, 400 |
| TseI | GCWGC | 2 cut(s) | 254, 283 |
| TspDTI | ATGAA | 1 cut(s) | 336 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 327 |
| VspI | ATTAAT | 1 cut(s) | 201 |
| XapI | RAATTY | 2 cut(s) | 51, 60 |
| XbaI | TCTAGA | 1 cut(s) | 112 |
| XceI | RCATGY | 1 cut(s) | 126 |
| XmnI | GAANNNNTTC | 1 cut(s) | 108 |
| XspI | CTAG | 2 cut(s) | 29, 113 |
| ZrmI | AGTACT | 1 cut(s) | 377 |
| Zsp2I | ATGCAT | 1 cut(s) | 85 |