RLG00000019121

receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
N/A
Physical Location & Seq
Reverse (-)
46883430 .. 46886739
3310 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019121

Sequence Viewer

Length: 1194 bp
ATGGTGGCTCGTTTGGCTGTGGCACTTGCATTGACGGAGGATGCAGTGGTGGAGTTTGGAGAGGCTGGTGCGGCGACAATTGCAGCCTCGTTCTTTTATCTGGTTGGCAGGGTGATTGCGCCTAGGGCAAAGGATGATTTTGGGCTGCCTAAGGCTATGGCTGCTGTGGGGTCAAGTAGTAGTGCAGAGGGTGTGGTTTTGTTCGACCACGGTGGTTGTATCTGTGACCAGTTTCTTTTTAAGCAAGCTGGTGGTGGAATGGCGGCTAGAGAGGCCAGAGGTGTTTTGGAAATTCCTGTAGGTCAGGTGGAGGGCAGGGTAGAGATGGTCGATGGAGTTGCTGAAGTCCCAAGTTGGAATGCACCTAATCCTGTGAAAACTGGTGCTCTGGTGATTGAGTTGGCAACGACAACTATGTTTACGAAGGTGGAGCAGGCTTTTGGGCTACCAAATGACAATGGTGTGGTGAAAATATATCCCCTAAAGACTAAGAGGGGTAGACCAAAAAGGTTTAAAAATAAACTGGGTCTAAAAGTTCGTAGTAAGAGAGTGGCTAGGAAGTTGGTGAAGGGTGTTGAAGAAGAGAAAGAGGAGTTTGTGATGGACGAGTCCAATAGAATTCCATTGGAGAGAGATGAGGTAGAGTCAGATGGGTCTTCTCTCTTTCACTCTTTTACTAAAGACAACAGAGATTCGATTCCCTATCCACTGAAACAACAGAGAAAAGGAGATTTGATTGTCCTGATTCCGTACTATGGAGAGATGGAGGGCATTTTTGTCTCCATCTACAATTGTTTATTTCCTTGTCTGTTTGATGTCAGGCTTGAAGTGGTTGCTGAGGTTAAAAGCATTAGGCTTTGGGTTTGTGGTTTGGTTGGTTGTGAATTTAAGTTCAGAGCAGCTTTAGAGGTTATGTACTTAAATGAAGATGGCGGGGTTATTGATGCTGGGTTGGTGAAAATCATAAATCTGATGAGAGGAGAGTGTTTGGAGAGGAGAGTGTTTGCAGAGGATGAGCTTACTAAGTTTGATGAAGATATTGACCACACAAGGTTCATGAATTGGTGGATTGATGACATTGAAGAAGGGCCCAATGTGACTTCAAAGGATGAGGATGAGGATTTGATTGATGAGTTTATTCCAAAAGTTGTGGAAGTTATGGACCTGGATGATGATGGATGGGCTAGTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

398

Amino Acids

44.06

Weight (kDa)

4.77

Isoelectric Point (pI)

33.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 499
AciI CCGC 3 cut(s) 71, 263, 933
AcsI RAATTY 3 cut(s) 291, 618, 884
AcuI CTGAAG 1 cut(s) 363
AfaI GTAC 2 cut(s) 752, 917
AfiI CCNNNNNNNGG 1 cut(s) 755
AgsI TTSAA 4 cut(s) 578, 827, 1082, 1104
AjnI CCWGG 1 cut(s) 1164
AluBI AGCT 4 cut(s) 248, 902, 1018, 1191
AluI AGCT 4 cut(s) 248, 902, 1018, 1191
Alw21I GWGCWC 1 cut(s) 388
Alw26I GTCTC 1 cut(s) 784
AoxI GGCC 2 cut(s) 273, 1088
ApaI GGGCCC 1 cut(s) 1092
ApeKI GCWGC 4 cut(s) 83, 145, 161, 899
ApoI RAATTY 3 cut(s) 291, 618, 884
AspA2I CCTAGG 1 cut(s) 122
AspLEI GCGC 1 cut(s) 121
AspS9I GGNCC 3 cut(s) 1088, 1089, 1162
AsuHPI GGTGA 5 cut(s) 124, 403, 478, 577, 967
AvaII GGWCC 1 cut(s) 1162
AvrII CCTAGG 1 cut(s) 122
AxyI CCTNAGG 1 cut(s) 150
BaeGI GKGCMC 1 cut(s) 1092
BanII GRGCYC 1 cut(s) 1092
BbsI GAAGAC 1 cut(s) 648
Bbv12I GWGCWC 1 cut(s) 388
BbvCI CCTCAGC 1 cut(s) 837
BbvI GCAGC 4 cut(s) 95, 132, 148, 911
BccI CCATC 9 cut(s) 319, 326, 595, 644, 757, 791, 923, 1169, 1173
BcgI CGANNNNNNTGC 2 cut(s) 320, 354
BciT130I CCWGG 1 cut(s) 1166
BcoDI GTCTC 1 cut(s) 784
BfaI CTAG 4 cut(s) 123, 267, 555, 1185
BfmI CTRYAG 1 cut(s) 297
BisI GCNGC 6 cut(s) 72, 84, 146, 162, 264, 900
BlnI CCTAGG 1 cut(s) 122
BlsI GCNGC 6 cut(s) 73, 85, 147, 163, 265, 901
Bme1390I CCNGG 1 cut(s) 1166
Bme18I GGWCC 1 cut(s) 1162
BmgT120I GGNCC 3 cut(s) 1088, 1089, 1162
BmiI GGNNCC 1 cut(s) 1090
BmrFI CCNGG 1 cut(s) 1166
BmrI ACTGGG 1 cut(s) 533
BmsI GCATC 2 cut(s) 31, 934
BmuI ACTGGG 1 cut(s) 533
BpiI GAAGAC 1 cut(s) 648
Bpu10I CCTNAGC 1 cut(s) 837
BsaJI CCNNGG 2 cut(s) 122, 208
Bsc4I CCNNNNNNNGG 1 cut(s) 755
Bse1I ACTGG 3 cut(s) 229, 385, 528
Bse21I CCTNAGG 1 cut(s) 150
BseBI CCWGG 1 cut(s) 1166
BseDI CCNNGG 2 cut(s) 122, 208
BseGI GGATG 7 cut(s) 46, 139, 1018, 1114, 1120, 1174, 1184
BseLI CCNNNNNNNGG 1 cut(s) 755
BseMII CTCAG 1 cut(s) 828
BseNI ACTGG 3 cut(s) 229, 385, 528
BseRI GAGGAG 3 cut(s) 605, 993, 1009
BseSI GKGCMC 1 cut(s) 1092
BseXI GCAGC 4 cut(s) 95, 132, 148, 911
BseYI CCCAGC 1 cut(s) 947
BsgI GTGCAG 1 cut(s) 204
BshFI GGCC 2 cut(s) 275, 1090
BsiHKAI GWGCWC 1 cut(s) 388
BslFI GGGAC 1 cut(s) 332
BslI CCNNNNNNNGG 1 cut(s) 755
BsmAI GTCTC 1 cut(s) 784
BsmFI GGGAC 1 cut(s) 332
BsmI GAATGC 1 cut(s) 364
BsnI GGCC 2 cut(s) 275, 1090
Bsp120I GGGCCC 1 cut(s) 1088
Bsp1286I GDGCHC 2 cut(s) 388, 1092
BspACI CCGC 3 cut(s) 71, 263, 933
BspANI GGCC 2 cut(s) 275, 1090
BspCNI CTCAG 1 cut(s) 829
BspHI TCATGA 1 cut(s) 1056
BspLI GGNNCC 1 cut(s) 1090
BsrI ACTGG 3 cut(s) 229, 385, 528
BssECI CCNNGG 2 cut(s) 122, 208
BssT1I CCWWGG 1 cut(s) 122
Bst2UI CCWGG 1 cut(s) 1166
Bst4CI ACNGT 1 cut(s) 212
Bst6I CTCTTC 1 cut(s) 576
BstC8I GCNNGC 2 cut(s) 246, 435
BstDEI CTNAG 4 cut(s) 150, 489, 837, 1023
BstDSI CCRYGG 1 cut(s) 208
BstF5I GGATG 7 cut(s) 46, 139, 1018, 1114, 1120, 1174, 1184
BstHHI GCGC 1 cut(s) 121
BstMAI GTCTC 1 cut(s) 784
BstMWI GCNNNNNNNGC 6 cut(s) 14, 71, 80, 125, 161, 272
BstNI CCWGG 1 cut(s) 1166
BstSCI CCNGG 1 cut(s) 1164
BstSFI CTRYAG 1 cut(s) 297
BstSLI GKGCMC 1 cut(s) 1092
BstV1I GCAGC 4 cut(s) 95, 132, 148, 911
BstV2I GAAGAC 1 cut(s) 648
Bsu36I CCTNAGG 1 cut(s) 150
BsuRI GGCC 2 cut(s) 275, 1090
BtgI CCRYGG 1 cut(s) 208
BtsCI GGATG 7 cut(s) 46, 139, 1018, 1114, 1120, 1174, 1184
BtsI GCAGTG 1 cut(s) 51
BtsIMutI CAGTG 2 cut(s) 51, 707
Cac8I GCNNGC 2 cut(s) 246, 435
CciI TCATGA 1 cut(s) 1056
CfoI GCGC 1 cut(s) 121
Cfr13I GGNCC 3 cut(s) 1088, 1089, 1162
Csp6I GTAC 2 cut(s) 751, 916
CspCI CAANNNNNGTGG 4 cut(s) 197, 232, 1131, 1166
CviAII CATG 1 cut(s) 1057
CviQI GTAC 2 cut(s) 751, 916
DdeI CTNAG 4 cut(s) 150, 489, 837, 1023
DraI TTTAAA 1 cut(s) 514
Eam1104I CTCTTC 1 cut(s) 576
EarI CTCTTC 1 cut(s) 576
Eco130I CCWWGG 1 cut(s) 122
Eco24I GRGCYC 1 cut(s) 1092
Eco47I GGWCC 1 cut(s) 1162
Eco57I CTGAAG 1 cut(s) 363
Eco81I CCTNAGG 1 cut(s) 150
EcoO109I RGGNCCY 1 cut(s) 1088
EcoRI GAATTC 1 cut(s) 618
EcoRII CCWGG 1 cut(s) 1164
EcoT14I CCWWGG 1 cut(s) 122
EcoT38I GRGCYC 1 cut(s) 1092
ErhI CCWWGG 1 cut(s) 122
FaeI CATG 1 cut(s) 1060
FaiI YATR 8 cut(s) 158, 416, 475, 756, 914, 965, 1058, 1160
FaqI GGGAC 1 cut(s) 332
FatI CATG 1 cut(s) 1056
FauI CCCGC 1 cut(s) 926
FblI GTMKAC 1 cut(s) 499
Fnu4HI GCNGC 6 cut(s) 72, 84, 146, 162, 264, 900
FokI GGATG 6 cut(s) 53, 146, 1025, 1121, 1127, 1181
FriOI GRGCYC 1 cut(s) 1092
Fsp4HI GCNGC 6 cut(s) 72, 84, 146, 162, 264, 900
FspBI CTAG 4 cut(s) 123, 267, 555, 1185
GlaI GCGC 1 cut(s) 120
GluI GCNGC 6 cut(s) 72, 84, 146, 162, 264, 900
GsaI CCCAGC 1 cut(s) 951
HaeIII GGCC 2 cut(s) 275, 1090
HhaI GCGC 1 cut(s) 121
Hin1II CATG 1 cut(s) 1060
Hin6I GCGC 1 cut(s) 119
HinP1I GCGC 1 cut(s) 119
HinfI GANTC 5 cut(s) 608, 644, 692, 697, 745
HphI GGTGA 5 cut(s) 124, 403, 478, 577, 967
Hpy166II GTNNAC 2 cut(s) 420, 500
Hpy188I TCNGA 3 cut(s) 649, 896, 972
Hpy188III TCNNGA 2 cut(s) 742, 1057
Hpy8I GTNNAC 2 cut(s) 420, 500
HpyAV CCTTC 3 cut(s) 418, 562, 1079
HpyCH4III ACNGT 1 cut(s) 212
HpyCH4V TGCA 6 cut(s) 29, 44, 83, 185, 362, 1007
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 71, 80, 125, 161, 272
HpyF3I CTNAG 4 cut(s) 150, 489, 837, 1023
Hsp92II CATG 1 cut(s) 1060
HspAI GCGC 1 cut(s) 119
LmnI GCTCC 1 cut(s) 430
Lsp1109I GCAGC 4 cut(s) 95, 132, 148, 911
LweI GCATC 2 cut(s) 31, 934
MaeI CTAG 4 cut(s) 123, 267, 555, 1185
MaeIII GTNAC 2 cut(s) 224, 1096
MboII GAAGA 6 cut(s) 590, 593, 648, 938, 1046, 1094
MfeI CAATTG 2 cut(s) 78, 790
MhlI GDGCHC 2 cut(s) 388, 1092
MluCI AATT 6 cut(s) 78, 291, 618, 790, 884, 1060
MlyI GAGTC 2 cut(s) 617, 653
MmeI TCCRAC 1 cut(s) 335
MseI TTAA 5 cut(s) 240, 513, 843, 888, 920
MspR9I CCNGG 1 cut(s) 1166
MunI CAATTG 2 cut(s) 78, 790
Mva1269I GAATGC 1 cut(s) 364
MvaI CCWGG 1 cut(s) 1166
MwoI GCNNNNNNNGC 6 cut(s) 14, 71, 80, 125, 161, 272
NlaIII CATG 1 cut(s) 1060
NlaIV GGNNCC 1 cut(s) 1090
NmuCI GTSAC 2 cut(s) 224, 1096
PagI TCATGA 1 cut(s) 1056
PctI GAATGC 1 cut(s) 364
PfeI GAWTC 3 cut(s) 692, 697, 745
PkrI GCNGC 6 cut(s) 73, 85, 147, 163, 265, 901
PleI GAGTC 2 cut(s) 616, 652
PpsI GAGTC 2 cut(s) 616, 652
Psp6I CCWGG 1 cut(s) 1164
PspFI CCCAGC 1 cut(s) 947
PspGI CCWGG 1 cut(s) 1164
PspN4I GGNNCC 1 cut(s) 1090
PspOMI GGGCCC 1 cut(s) 1088
PspPI GGNCC 3 cut(s) 1088, 1089, 1162
RsaI GTAC 2 cut(s) 752, 917
RsaNI GTAC 2 cut(s) 751, 916
SaqAI TTAA 5 cut(s) 240, 513, 843, 888, 920
SatI GCNGC 6 cut(s) 72, 84, 146, 162, 264, 900
Sau96I GGNCC 3 cut(s) 1088, 1089, 1162
SchI GAGTC 2 cut(s) 617, 653
ScrFI CCNGG 1 cut(s) 1166
SduI GDGCHC 2 cut(s) 388, 1092
SfaNI GCATC 2 cut(s) 31, 934
SfcI CTRYAG 1 cut(s) 297
SinI GGWCC 1 cut(s) 1162
Sse9I AATT 6 cut(s) 78, 291, 618, 790, 884, 1060
SsiI CCGC 3 cut(s) 71, 263, 933
SspMI CTAG 4 cut(s) 123, 267, 555, 1185
StyD4I CCNGG 1 cut(s) 1164
StyI CCWWGG 1 cut(s) 122
TaaI ACNGT 1 cut(s) 212
TaqI TCGA 3 cut(s) 204, 330, 695
TasI AATT 6 cut(s) 78, 291, 618, 790, 884, 1060
TatI WGTACW 1 cut(s) 915
TauI GCSGC 2 cut(s) 74, 266
TfiI GAWTC 3 cut(s) 692, 697, 745
Tru1I TTAA 5 cut(s) 240, 513, 843, 888, 920
Tru9I TTAA 5 cut(s) 240, 513, 843, 888, 920
TscAI CASTG 2 cut(s) 51, 714
TseFI GTSAC 2 cut(s) 224, 1096
TseI GCWGC 4 cut(s) 83, 145, 161, 899
Tsp45I GTSAC 2 cut(s) 224, 1096
TspDTI ATGAA 4 cut(s) 939, 1045, 1047, 1073
TspGWI ACGGA 2 cut(s) 50, 738
TspRI CASTG 2 cut(s) 51, 714
VpaK11BI GGWCC 1 cut(s) 1162
XapI RAATTY 3 cut(s) 291, 618, 884
XcmI CCANNNNNNNNNTGG 1 cut(s) 283
XmaJI CCTAGG 1 cut(s) 122
XmiI GTMKAC 1 cut(s) 499
XspI CTAG 4 cut(s) 123, 267, 555, 1185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.