RLG00000019720

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
N/A
Physical Location & Seq
Reverse (-)
55955950 .. 55967630
11681 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019720

Sequence Viewer

Length: 1422 bp
ATGTCGGCACAGACTGTTTATCAGACGATCAACGCCAACGCTACTACTATTGCTATACCGACTATTTATCCTTTGATCAACGCCACCGCTCCTACAGCGTCGACGTCTAATTTGCCACCGCCCATAGGGAAGTTTCCTTTAGGGTGCACGCCGGTCGGGGTTATAGTCGGCGTTGCAACAGAAGGGTTCAGTGATGAATTGTATGGATCAAATAAACCGCCCCCAGCCTTTGGATTTTCTGAAAGCACATTTACATATGAAGAATTAGTCATGGCAATAAATGGATTCTCCAATGACAATCTTCTTGGTCCTGGCTTTGGTATTCTTCCAAATGGGAAAGTGGTTGCAATTAAACAGCTGAAAGCTGGGAGTGGACAGGGGGAGCGTGAATTCCAGGCAGAGGGTGAAGTCATTACTCGTGTCCATCACAGACACCTTGTATCACTGGTTGGATACTACATTAGTGGGGCCCAGAGATTGCTTGATTATGAGTTCGTTTCCAATAACACCTTGGAATTTCACTTGCATGATAGGCCCTTTCGAATCTTATCAAAGAAAACCTTTGTAGGAAAGGGGCGACCAACTATGACTTGGCCAACAAGAATGAAAATTGCTCTAGGATCTGCAAAAGGATTGGCATATCTCCATGAGGACTGTCATCCCAAGATCATACACCGTGACATCAAGGCTGCCAATATTCTTATTGATGACAACTTTGAGGCAAAGTTGGTCACAAAGCTGGCAAAGTTTCCTAATGTTGTCCCACCCATTTTCATTCCCCCAAAAGCAAACTCAAGCATATCTGAGTTGAACGGCCTATTTGAAACATGCATCAATCCCCAATCATATGACTATTCTCTTGTTGATTCCTTATTTGATGCACTTTCTTCACCAGATTTCTCAAATATCAACGATTCTAGCCACACGAGTTTTTTGAACCAGCCTTTGATAGAAGAACTTATCGGGACTACTAAGAATATTCCCACTGGTGTAGTGGCCTCTTTTGGTTTGGATGCTAAAATTGATTATATTGCTAAAGGCAAGAGTCTGCCTAAAAAAGGGAAGTTGCTGCAGGCTCTGATGGAAGCCAGTCCATTGCTTAAGACGCTTCTTGTCACTGGGCTTCCTCTGCCCCCGTGGCGGAATCCTCCTACTATGCAGACCCTAGAAATCCCACTCATATCACTCGAAGGTTGCGAGGCAATTCTTGCAAGTTTTAATGAGAAACCAGTGACAAAGGCATGTTCTTCTAACCATCTGAATTCCATATCCTGTCCTAGATTTTCTCAAATATGTTCAGCTCCCATGTGGAATTTCAACAATGTTCCTCCTGTGATATCATGCAAAAGTTCGAGGCCATTGAATTCGAGTTCATATTTTGATAAACAAATCCCTGCTGCCAAGCAATGTAGGCTTCAATGA

Protein Analysis

474

Amino Acids

51.49

Weight (kDa)

8.44

Isoelectric Point (pI)

38.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 111 - 243 4.1e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 113 - 243 1.4e-17 Protein tyrosine and serine/threonine kinase
DUF1635 PF07795 326 - 417 1.3e-19 Protein of unknown function (DUF1635)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 107
AccB7I CCANNNNNTGG 1 cut(s) 230
AccBSI CCGCTC 1 cut(s) 89
AccI GTMKAC 1 cut(s) 101
AciI CCGC 4 cut(s) 87, 119, 218, 1141
AclWI GGATC 2 cut(s) 214, 628
AcoI YGGCCR 1 cut(s) 593
AcsI RAATTY 5 cut(s) 389, 515, 1261, 1312, 1363
AcyI GRCGYC 1 cut(s) 104
AfiI CCNNNNNNNGG 6 cut(s) 125, 230, 317, 400, 1058, 1140
AflII CTTAAG 1 cut(s) 1100
AgsI TTSAA 6 cut(s) 811, 824, 937, 1318, 1363, 1418
AjnI CCWGG 2 cut(s) 310, 393
AluBI AGCT 4 cut(s) 358, 365, 739, 1301
AluI AGCT 4 cut(s) 358, 365, 739, 1301
Alw21I GWGCWC 1 cut(s) 149
Alw44I GTGCAC 1 cut(s) 145
AlwI GGATC 2 cut(s) 214, 628
AlwNI CAGNNNCTG 1 cut(s) 1078
AoxI GGCC 6 cut(s) 468, 533, 593, 814, 996, 1355
ApaI GGGCCC 1 cut(s) 472
ApaLI GTGCAC 1 cut(s) 145
ApeKI GCWGC 3 cut(s) 689, 1069, 1397
ApoI RAATTY 5 cut(s) 389, 515, 1261, 1312, 1363
ArsI GACNNNNNNTTYG 2 cut(s) 94, 126
AspS9I GGNCC 4 cut(s) 308, 468, 469, 534
AsuHPI GGTGA 2 cut(s) 416, 882
AsuII TTCGAA 1 cut(s) 541
AvaII GGWCC 1 cut(s) 308
BaeGI GKGCMC 2 cut(s) 149, 472
BalI TGGCCA 1 cut(s) 595
BanII GRGCYC 1 cut(s) 472
BauI CACGAG 2 cut(s) 417, 925
Bbv12I GWGCWC 1 cut(s) 149
BbvI GCAGC 3 cut(s) 676, 1056, 1384
BccI CCATC 3 cut(s) 432, 1075, 1263
BceAI ACGGC 1 cut(s) 829
BcgI CGANNNNNNTGC 2 cut(s) 136, 170
BciT130I CCWGG 2 cut(s) 312, 395
BciVI GTATCC 1 cut(s) 446
BclI TGATCA 1 cut(s) 75
BfaI CTAG 4 cut(s) 617, 918, 1166, 1278
BfmI CTRYAG 2 cut(s) 93, 1070
BfrI CTTAAG 1 cut(s) 1100
BfuI GTATCC 1 cut(s) 446
BglI GCCNNNNNGGC 1 cut(s) 1138
BisI GCNGC 3 cut(s) 690, 1070, 1398
BlsI GCNGC 3 cut(s) 691, 1071, 1399
Bme1390I CCNGG 2 cut(s) 312, 395
Bme18I GGWCC 1 cut(s) 308
BmgT120I GGNCC 4 cut(s) 308, 468, 469, 534
BmiI GGNNCC 2 cut(s) 469, 470
BmrFI CCNGG 2 cut(s) 312, 395
BmrI ACTGGG 1 cut(s) 1128
BmsI GCATC 3 cut(s) 840, 868, 1003
BmuI ACTGGG 1 cut(s) 1128
Bpu14I TTCGAA 1 cut(s) 541
BpuEI CTTGAG 1 cut(s) 778
BsaHI GRCGYC 1 cut(s) 104
BsaJI CCNNGG 2 cut(s) 510, 1136
Bsc4I CCNNNNNNNGG 6 cut(s) 125, 230, 317, 400, 1058, 1140
Bse118I RCCGGY 1 cut(s) 151
Bse1I ACTGG 5 cut(s) 450, 991, 1089, 1123, 1229
Bse3DI GCAATG 2 cut(s) 1094, 1412
BseBI CCWGG 2 cut(s) 312, 395
BseDI CCNNGG 2 cut(s) 510, 1136
BseGI GGATG 2 cut(s) 658, 1018
BseLI CCNNNNNNNGG 6 cut(s) 125, 230, 317, 400, 1058, 1140
BseMI GCAATG 2 cut(s) 1094, 1412
BseMII CTCAG 1 cut(s) 795
BseNI ACTGG 5 cut(s) 450, 991, 1089, 1123, 1229
BseSI GKGCMC 2 cut(s) 149, 472
BseXI GCAGC 3 cut(s) 676, 1056, 1384
BseYI CCCAGC 2 cut(s) 223, 365
Bsh1285I CGRYCG 1 cut(s) 156
BshFI GGCC 6 cut(s) 470, 535, 595, 816, 998, 1357
BsiEI CGRYCG 1 cut(s) 156
BsiHKAI GWGCWC 1 cut(s) 149
BsiSI CCGG 1 cut(s) 152
BslFI GGGAC 2 cut(s) 746, 979
BslI CCNNNNNNNGG 6 cut(s) 125, 230, 317, 400, 1058, 1140
BsmFI GGGAC 2 cut(s) 746, 979
BsnI GGCC 6 cut(s) 470, 535, 595, 816, 998, 1357
Bsp119I TTCGAA 1 cut(s) 541
Bsp120I GGGCCC 1 cut(s) 468
Bsp1286I GDGCHC 2 cut(s) 149, 472
Bsp143I GATC 5 cut(s) 27, 75, 206, 620, 666
BspACI CCGC 4 cut(s) 87, 119, 218, 1141
BspANI GGCC 6 cut(s) 470, 535, 595, 816, 998, 1357
BspCNI CTCAG 1 cut(s) 796
BspLI GGNNCC 2 cut(s) 469, 470
BspMAI CTGCAG 1 cut(s) 1074
BspPI GGATC 2 cut(s) 214, 628
BspT104I TTCGAA 1 cut(s) 541
BspTI CTTAAG 1 cut(s) 1100
BsrBI CCGCTC 1 cut(s) 89
BsrDI GCAATG 2 cut(s) 1094, 1412
BsrFI RCCGGY 1 cut(s) 151
BsrI ACTGG 5 cut(s) 450, 991, 1089, 1123, 1229
BssAI RCCGGY 1 cut(s) 151
BssECI CCNNGG 2 cut(s) 510, 1136
BssMI GATC 5 cut(s) 27, 75, 206, 620, 666
BssNI GRCGYC 1 cut(s) 104
BssSI CACGAG 2 cut(s) 417, 925
BssT1I CCWWGG 1 cut(s) 510
Bst2BI CACGAG 2 cut(s) 417, 925
Bst2UI CCWGG 2 cut(s) 312, 395
Bst4CI ACNGT 3 cut(s) 16, 656, 677
BstACI GRCGYC 1 cut(s) 104
BstAFI CTTAAG 1 cut(s) 1100
BstAPI GCANNNNNTGC 1 cut(s) 1208
BstBI TTCGAA 1 cut(s) 541
BstC8I GCNNGC 3 cut(s) 149, 741, 1074
BstDEI CTNAG 2 cut(s) 804, 972
BstDSI CCRYGG 1 cut(s) 1136
BstENI CCTNNNNNAGG 1 cut(s) 1056
BstF5I GGATG 2 cut(s) 658, 1018
BstKTI GATC 5 cut(s) 30, 78, 209, 623, 669
BstMBI GATC 5 cut(s) 27, 75, 206, 620, 666
BstMCI CGRYCG 1 cut(s) 156
BstMWI GCNNNNNNNGC 7 cut(s) 95, 532, 1105, 1129, 1138, 1208, 1411
BstNI CCWGG 2 cut(s) 312, 395
BstNSI RCATGY 2 cut(s) 831, 1245
BstSCI CCNGG 2 cut(s) 310, 393
BstSFI CTRYAG 2 cut(s) 93, 1070
BstSLI GKGCMC 2 cut(s) 149, 472
BstV1I GCAGC 3 cut(s) 676, 1056, 1384
BstX2I RGATCY 1 cut(s) 620
BstYI RGATCY 1 cut(s) 620
BsuI GTATCC 1 cut(s) 446
BsuRI GGCC 6 cut(s) 470, 535, 595, 816, 998, 1357
BtgI CCRYGG 1 cut(s) 1136
BtsCI GGATG 2 cut(s) 658, 1018
BtsIMutI CAGTG 5 cut(s) 196, 443, 984, 1116, 1236
Cac8I GCNNGC 3 cut(s) 149, 741, 1074
CaiI CAGNNNCTG 1 cut(s) 1078
Cfr10I RCCGGY 1 cut(s) 151
Cfr13I GGNCC 4 cut(s) 308, 468, 469, 534
CseI GACGC 2 cut(s) 87, 1114
CviAII CATG 7 cut(s) 271, 527, 647, 828, 1242, 1306, 1341
DdeI CTNAG 2 cut(s) 804, 972
DpnI GATC 5 cut(s) 29, 77, 208, 622, 668
DpnII GATC 5 cut(s) 27, 75, 206, 620, 666
EaeI YGGCCR 1 cut(s) 593
EciI GGCGGA 1 cut(s) 1156
Eco130I CCWWGG 1 cut(s) 510
Eco24I GRGCYC 1 cut(s) 472
Eco32I GATATC 1 cut(s) 1338
Eco47I GGWCC 1 cut(s) 308
EcoNI CCTNNNNNAGG 1 cut(s) 1056
EcoO109I RGGNCCY 2 cut(s) 468, 534
EcoRI GAATTC 3 cut(s) 389, 1261, 1363
EcoRII CCWGG 2 cut(s) 310, 393
EcoRV GATATC 1 cut(s) 1338
EcoT14I CCWWGG 1 cut(s) 510
EcoT22I ATGCAT 1 cut(s) 833
EcoT38I GRGCYC 1 cut(s) 472
ErhI CCWWGG 1 cut(s) 510
FaeI CATG 7 cut(s) 274, 530, 650, 831, 1245, 1309, 1344
FalI AAGNNNNNCTT 2 cut(s) 545, 577
FaqI GGGAC 2 cut(s) 746, 979
FatI CATG 7 cut(s) 270, 526, 646, 827, 1241, 1305, 1340
FauNDI CATATG 2 cut(s) 256, 847
FbaI TGATCA 1 cut(s) 75
FblI GTMKAC 1 cut(s) 101
Fnu4HI GCNGC 3 cut(s) 690, 1070, 1398
FokI GGATG 2 cut(s) 645, 1025
FriOI GRGCYC 1 cut(s) 472
Fsp4HI GCNGC 3 cut(s) 690, 1070, 1398
FspBI CTAG 4 cut(s) 617, 918, 1166, 1278
GluI GCNGC 3 cut(s) 690, 1070, 1398
GsaI CCCAGC 2 cut(s) 227, 369
HaeIII GGCC 6 cut(s) 470, 535, 595, 816, 998, 1357
HapII CCGG 1 cut(s) 152
HgaI GACGC 2 cut(s) 87, 1114
Hin1I GRCGYC 1 cut(s) 104
Hin1II CATG 7 cut(s) 274, 530, 650, 831, 1245, 1309, 1344
HincII GTYRAC 1 cut(s) 102
HindII GTYRAC 1 cut(s) 102
HinfI GANTC 6 cut(s) 285, 543, 866, 914, 1045, 1144
HpaII CCGG 1 cut(s) 152
HphI GGTGA 2 cut(s) 416, 882
Hpy166II GTNNAC 3 cut(s) 102, 147, 374
Hpy188I TCNGA 5 cut(s) 24, 241, 805, 1080, 1260
Hpy188III TCNNGA 1 cut(s) 964
Hpy8I GTNNAC 3 cut(s) 102, 147, 374
Hpy99I CGWCG 2 cut(s) 103, 106
HpyAV CCTTC 2 cut(s) 176, 1184
HpyCH4III ACNGT 3 cut(s) 16, 656, 677
HpyCH4IV ACGT 1 cut(s) 104
HpyF10VI GCNNNNNNNGC 7 cut(s) 95, 532, 1105, 1129, 1138, 1208, 1411
HpyF3I CTNAG 2 cut(s) 804, 972
HpySE526I ACGT 1 cut(s) 104
Hsp92I GRCGYC 1 cut(s) 104
Hsp92II CATG 7 cut(s) 274, 530, 650, 831, 1245, 1309, 1344
Ksp22I TGATCA 1 cut(s) 75
Kzo9I GATC 5 cut(s) 27, 75, 206, 620, 666
LmnI GCTCC 3 cut(s) 94, 382, 1306
Lsp1109I GCAGC 3 cut(s) 676, 1056, 1384
LweI GCATC 3 cut(s) 840, 868, 1003
MaeI CTAG 4 cut(s) 617, 918, 1166, 1278
MaeII ACGT 1 cut(s) 104
MaeIII GTNAC 4 cut(s) 677, 730, 1114, 1231
MalI GATC 5 cut(s) 29, 77, 208, 622, 668
MbiI CCGCTC 1 cut(s) 89
MboI GATC 5 cut(s) 27, 75, 206, 620, 666
MboII GAAGA 6 cut(s) 272, 293, 317, 879, 965, 1239
MflI RGATCY 1 cut(s) 620
MhlI GDGCHC 2 cut(s) 149, 472
MlsI TGGCCA 1 cut(s) 595
MluNI TGGCCA 1 cut(s) 595
MlyI GAGTC 1 cut(s) 1054
MmeI TCCRAC 1 cut(s) 430
MnlI CCTC 9 cut(s) 394, 643, 712, 1009, 1137, 1158, 1192, 1338, 1347
Mox20I TGGCCA 1 cut(s) 595
Mph1103I ATGCAT 1 cut(s) 833
MscI TGGCCA 1 cut(s) 595
MseI TTAA 3 cut(s) 351, 1101, 1218
MslI CAYNNNNRTG 1 cut(s) 525
Msp20I TGGCCA 1 cut(s) 595
MspA1I CMGCKG 1 cut(s) 358
MspCI CTTAAG 1 cut(s) 1100
MspI CCGG 1 cut(s) 152
MspR9I CCNGG 2 cut(s) 312, 395
MvaI CCWGG 2 cut(s) 312, 395
MwoI GCNNNNNNNGC 7 cut(s) 95, 532, 1105, 1129, 1138, 1208, 1411
NdeI CATATG 2 cut(s) 256, 847
NdeII GATC 5 cut(s) 27, 75, 206, 620, 666
NlaIII CATG 7 cut(s) 274, 530, 650, 831, 1245, 1309, 1344
NlaIV GGNNCC 2 cut(s) 469, 470
NmuCI GTSAC 4 cut(s) 677, 730, 1114, 1231
NsiI ATGCAT 1 cut(s) 833
NspI RCATGY 2 cut(s) 831, 1245
NspV TTCGAA 1 cut(s) 541
PcsI WCGNNNNNNNCGW 1 cut(s) 1194
PfeI GAWTC 5 cut(s) 285, 543, 866, 914, 1144
PflMI CCANNNNNTGG 1 cut(s) 230
PkrI GCNGC 3 cut(s) 691, 1071, 1399
PleI GAGTC 1 cut(s) 1053
PpsI GAGTC 1 cut(s) 1053
Psp6I CCWGG 2 cut(s) 310, 393
PspFI CCCAGC 2 cut(s) 223, 365
PspGI CCWGG 2 cut(s) 310, 393
PspN4I GGNNCC 2 cut(s) 469, 470
PspOMI GGGCCC 1 cut(s) 468
PspPI GGNCC 4 cut(s) 308, 468, 469, 534
PstI CTGCAG 1 cut(s) 1074
PstNI CAGNNNCTG 1 cut(s) 1078
PsuI RGATCY 1 cut(s) 620
PvuII CAGCTG 1 cut(s) 358
RseI CAYNNNNRTG 1 cut(s) 525
SalI GTCGAC 1 cut(s) 100
SaqAI TTAA 3 cut(s) 351, 1101, 1218
SatI GCNGC 3 cut(s) 690, 1070, 1398
Sau3AI GATC 5 cut(s) 27, 75, 206, 620, 666
Sau96I GGNCC 4 cut(s) 308, 468, 469, 534
SchI GAGTC 1 cut(s) 1054
ScrFI CCNGG 2 cut(s) 312, 395
SduI GDGCHC 2 cut(s) 149, 472
SetI ASST 9 cut(s) 107, 360, 367, 438, 512, 563, 741, 1195, 1303
SfaNI GCATC 3 cut(s) 840, 868, 1003
SfcI CTRYAG 2 cut(s) 93, 1070
SfuI TTCGAA 1 cut(s) 541
SgrDI CGTCGACG 1 cut(s) 100
SinI GGWCC 1 cut(s) 308
SmiMI CAYNNNNRTG 1 cut(s) 525
SmlI CTYRAG 2 cut(s) 793, 1100
SmoI CTYRAG 2 cut(s) 793, 1100
SsiI CCGC 4 cut(s) 87, 119, 218, 1141
SspI AATATT 2 cut(s) 697, 979
SspMI CTAG 4 cut(s) 617, 918, 1166, 1278
StyD4I CCNGG 2 cut(s) 310, 393
StyI CCWWGG 1 cut(s) 510
TaaI ACNGT 3 cut(s) 16, 656, 677
TaiI ACGT 1 cut(s) 107
TaqI TCGA 5 cut(s) 101, 541, 1188, 1352, 1367
TfiI GAWTC 5 cut(s) 285, 543, 866, 914, 1144
Tru1I TTAA 3 cut(s) 351, 1101, 1218
Tru9I TTAA 3 cut(s) 351, 1101, 1218
TscAI CASTG 5 cut(s) 196, 450, 991, 1123, 1236
TseFI GTSAC 4 cut(s) 677, 730, 1114, 1231
TseI GCWGC 3 cut(s) 689, 1069, 1397
Tsp45I GTSAC 4 cut(s) 677, 730, 1114, 1231
TspDTI ATGAA 5 cut(s) 210, 273, 620, 763, 1362
TspRI CASTG 5 cut(s) 196, 450, 991, 1123, 1236
Van91I CCANNNNNTGG 1 cut(s) 230
Vha464I CTTAAG 1 cut(s) 1100
VneI GTGCAC 1 cut(s) 145
VpaK11BI GGWCC 1 cut(s) 308
XagI CCTNNNNNAGG 1 cut(s) 1056
XapI RAATTY 5 cut(s) 389, 515, 1261, 1312, 1363
XceI RCATGY 2 cut(s) 831, 1245
XcmI CCANNNNNNNNNTGG 3 cut(s) 508, 588, 991
XmiI GTMKAC 1 cut(s) 101
XspI CTAG 4 cut(s) 617, 918, 1166, 1278
ZraI GACGTC 1 cut(s) 105
Zsp2I ATGCAT 1 cut(s) 833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.