RLG00000020966
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
N/A
Physical Location & Seq
Forward (+)
70571927 .. 70572283
357 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020966

Sequence Viewer

Length: 357 bp
ATGGCTGAAAAGTTAAATGGGAATCCTACTACGCCAATCTGCAATTCTTGGGTTGGCACCACCTGTACATTGAATTGGCACACGTTTGCTTGCTTTTCAACTCCATGGTGTTGGACACCAATTCCTTCAAACACTCTCGGCAAGCTGGATGCTCTCATGATCCTTAGCCTTCACTCAAACCGCCTTAGTGGGAGTGTTTCCATCTCATATTTTCTCCCTCCCTTCGTTGCGCTACATATACCTTCACAACAACAATCTTACGGTAGTATTCCCTCTTCTCTACCTCCCAACCTCACCGTACTTGATTTGTCTTCCAACTCCTTCACTGGCAGCATTCCAGCCACGATCCAAAACTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

119

Amino Acids

12.75

Weight (kDa)

6.79

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 56
AciI CCGC 1 cut(s) 181
AclWI GGATC 2 cut(s) 154, 340
AfaI GTAC 2 cut(s) 67, 300
AflIII ACRYGT 1 cut(s) 81
AgsI TTSAA 3 cut(s) 73, 99, 129
AjuI GAANNNNNNNTTGG 2 cut(s) 28, 60
AluBI AGCT 1 cut(s) 145
AluI AGCT 1 cut(s) 145
AlwI GGATC 2 cut(s) 154, 340
ApeKI GCWGC 1 cut(s) 330
AspLEI GCGC 1 cut(s) 232
AsuHPI GGTGA 1 cut(s) 286
BanI GGYRCC 1 cut(s) 56
BarI GAAGNNNNNNTAC 2 cut(s) 259, 291
BbsI GAAGAC 1 cut(s) 303
BbvI GCAGC 1 cut(s) 342
BccI CCATC 1 cut(s) 209
BisI GCNGC 1 cut(s) 331
BlsI GCNGC 1 cut(s) 332
BmiI GGNNCC 1 cut(s) 58
BmsI GCATC 1 cut(s) 139
BpiI GAAGAC 1 cut(s) 303
Bpu10I CCTNAGC 1 cut(s) 164
BsaJI CCNNGG 1 cut(s) 104
Bse1I ACTGG 1 cut(s) 331
BseDI CCNNGG 1 cut(s) 104
BseGI GGATG 1 cut(s) 154
BseNI ACTGG 1 cut(s) 331
BseXI GCAGC 1 cut(s) 342
BshNI GGYRCC 1 cut(s) 56
BsmI GAATGC 1 cut(s) 333
Bsp1407I TGTACA 1 cut(s) 65
Bsp143I GATC 2 cut(s) 159, 345
Bsp19I CCATGG 1 cut(s) 104
BspACI CCGC 1 cut(s) 181
BspHI TCATGA 1 cut(s) 156
BspLI GGNNCC 1 cut(s) 58
BspPI GGATC 2 cut(s) 154, 340
BspT107I GGYRCC 1 cut(s) 56
BsrGI TGTACA 1 cut(s) 65
BsrI ACTGG 1 cut(s) 331
BssECI CCNNGG 1 cut(s) 104
BssMI GATC 2 cut(s) 159, 345
BssT1I CCWWGG 1 cut(s) 104
Bst4CI ACNGT 2 cut(s) 263, 298
Bst6I CTCTTC 1 cut(s) 280
BstAUI TGTACA 1 cut(s) 65
BstC8I GCNNGC 2 cut(s) 91, 143
BstDEI CTNAG 2 cut(s) 164, 185
BstDSI CCRYGG 1 cut(s) 104
BstF5I GGATG 1 cut(s) 154
BstHHI GCGC 1 cut(s) 232
BstKTI GATC 2 cut(s) 162, 348
BstMBI GATC 2 cut(s) 159, 345
BstV1I GCAGC 1 cut(s) 342
BstV2I GAAGAC 1 cut(s) 303
BstXI CCANNNNNNTGG 1 cut(s) 111
BtgI CCRYGG 1 cut(s) 104
BtsCI GGATG 1 cut(s) 154
BtsIMutI CAGTG 1 cut(s) 324
Cac8I GCNNGC 2 cut(s) 91, 143
CciI TCATGA 1 cut(s) 156
CfoI GCGC 1 cut(s) 232
Csp6I GTAC 2 cut(s) 66, 299
CviAII CATG 2 cut(s) 105, 157
CviJI RGCY 4 cut(s) 5, 145, 168, 341
CviKI_1 RGCY 4 cut(s) 5, 145, 168, 341
CviQI GTAC 2 cut(s) 66, 299
DdeI CTNAG 2 cut(s) 164, 185
DpnI GATC 2 cut(s) 161, 347
DpnII GATC 2 cut(s) 159, 345
Eam1104I CTCTTC 1 cut(s) 280
EarI CTCTTC 1 cut(s) 280
Eco130I CCWWGG 1 cut(s) 104
EcoT14I CCWWGG 1 cut(s) 104
ErhI CCWWGG 1 cut(s) 104
FaeI CATG 2 cut(s) 108, 160
FaiI YATR 5 cut(s) 106, 158, 208, 237, 239
FatI CATG 2 cut(s) 104, 156
Fnu4HI GCNGC 1 cut(s) 331
FokI GGATG 1 cut(s) 161
Fsp4HI GCNGC 1 cut(s) 331
GlaI GCGC 1 cut(s) 231
GluI GCNGC 1 cut(s) 331
HhaI GCGC 1 cut(s) 232
Hin1II CATG 2 cut(s) 108, 160
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HinfI GANTC 1 cut(s) 22
HphI GGTGA 1 cut(s) 286
Hpy188III TCNNGA 1 cut(s) 157
HpyAV CCTTC 5 cut(s) 135, 179, 232, 252, 331
HpyCH4III ACNGT 2 cut(s) 263, 298
HpyCH4IV ACGT 1 cut(s) 83
HpyCH4V TGCA 1 cut(s) 42
HpyF3I CTNAG 2 cut(s) 164, 185
HpySE526I ACGT 1 cut(s) 83
Hsp92II CATG 2 cut(s) 108, 160
HspAI GCGC 1 cut(s) 230
Kzo9I GATC 2 cut(s) 159, 345
LpnPI CCDG 4 cut(s) 76, 131, 312, 351
Lsp1109I GCAGC 1 cut(s) 342
LweI GCATC 1 cut(s) 139
MaeII ACGT 1 cut(s) 83
MalI GATC 2 cut(s) 161, 347
MboI GATC 2 cut(s) 159, 345
MboII GAAGA 2 cut(s) 267, 303
MluCI AATT 3 cut(s) 43, 73, 120
MmeI TCCRAC 2 cut(s) 92, 339
MnlI CCTC 4 cut(s) 228, 283, 294, 302
MseI TTAA 1 cut(s) 14
Mva1269I GAATGC 1 cut(s) 333
NcoI CCATGG 1 cut(s) 104
NdeII GATC 2 cut(s) 159, 345
NlaIII CATG 2 cut(s) 108, 160
NlaIV GGNNCC 1 cut(s) 58
NmeAIII GCCGAG 1 cut(s) 117
PagI TCATGA 1 cut(s) 156
PctI GAATGC 1 cut(s) 333
PfeI GAWTC 1 cut(s) 22
PkrI GCNGC 1 cut(s) 332
PspN4I GGNNCC 1 cut(s) 58
RsaI GTAC 2 cut(s) 67, 300
RsaNI GTAC 2 cut(s) 66, 299
SaqAI TTAA 1 cut(s) 14
SatI GCNGC 1 cut(s) 331
Sau3AI GATC 2 cut(s) 159, 345
SetI ASST 6 cut(s) 65, 86, 147, 244, 286, 294
SfaNI GCATC 1 cut(s) 139
Sse9I AATT 3 cut(s) 43, 73, 120
SsiI CCGC 1 cut(s) 181
StyI CCWWGG 1 cut(s) 104
TaaI ACNGT 2 cut(s) 263, 298
TaiI ACGT 1 cut(s) 86
TasI AATT 3 cut(s) 43, 73, 120
TatI WGTACW 1 cut(s) 65
TfiI GAWTC 1 cut(s) 22
Tru1I TTAA 1 cut(s) 14
Tru9I TTAA 1 cut(s) 14
TscAI CASTG 1 cut(s) 331
TseI GCWGC 1 cut(s) 330
TspRI CASTG 1 cut(s) 331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.